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ACD38_20

Alias: ACD38_66751.12524.10

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD38_20_1

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comp(1..84)
DNA (84bp) protein (28aa)
seg (db=Seg db_id=seg from=9 to=26)
Uncharacterized protein {ECO:0000313|EMBL:EKD84676.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD38_20_2
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria

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169..1695
DNA (1527bp) protein (509aa)
Mg chelatase, subunit ChlI n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C8J7_SPHTD (db=UNIREF evalue=2.0e-160 bit_score=569.0 identity=55.12 coverage=98.8212180746562)
Mg chelatase-like protein
Mg chelatase-like protein
TIGR00368: Mg chelatase-like protein (db=HMMTigr db_id=TIGR00368 from=5 to=503 evalue=1.0e-216 interpro_id=IPR004482 interpro_description=Mg chelatase-related protein)
ACD38_20_3
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

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comp(1869..2000)
DNA (132bp) protein (44aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DG67_9EURY (db=UNIREF evalue=3.0e-10 bit_score=67.4 identity=71.43 coverage=93.1818181818182)
Uncharacterized protein {ECO:0000313|EMBL:KKR17103.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
hypothetical protein
ACD38_20_4
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

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comp(2029..2349)
DNA (321bp) protein (107aa)
seg (db=Seg db_id=seg from=92 to=103)
transmembrane_regions (db=TMHMM db_id=tmhmm from=78 to=96)
coiled-coil (db=Coil db_id=coil from=2 to=23 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:KKR17104.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
ACD38_20_5
GWF2_OP11_38_7, Daviesbacteria, Microgenomates, Bacteria

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2479..2952
DNA (474bp) protein (158aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
Uncharacterized protein {ECO:0000313|EMBL:KKQ81301.1}; TaxID=1618433 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWF2_38_7.;"
hypothetical protein alias=ACD38_66751.12524.10G0005,ACD38_66751.12524.10_5,ACD38_C00020G00005 id=43434 tax=ACD38 species=Desulfitobacterium hafniense genus=Desulfitobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OP11 organism_desc=OP11
ACD38_20_6
GWC2_OP11_40_12, Daviesbacteria, Microgenomates, Bacteria

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2949..4148
DNA (1200bp) protein (400aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=17 to=39)
seg (db=Seg db_id=seg from=17 to=27)
DUF3048 (db=HMMPfam db_id=PF11258 from=87 to=388 evalue=1.4e-72 interpro_id=IPR021416 interpro_description=Protein of unknown function DUF3048)
ACD38_20_7

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4180..4773
DNA (594bp) protein (198aa)
Transcriptional regulator
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1J9G3_9ARCH (db=UNIREF evalue=9.0e-23 bit_score=109.0 identity=39.34 coverage=90.4040404040404)
coiled-coil (db=Coil db_id=coil from=33 to=54 evalue=NA)
seg (db=Seg db_id=seg from=88 to=104)
ACD38_20_8
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

4783..6087
DNA (1305bp) protein (435aa)
hypothetical protein
hypothetical protein
Protein-export membrane protein n=1 Tax=Gloeobacter violaceus RepID=Q7NDR6_GLOVI (db=UNIREF evalue=7.0e-85 bit_score=318.0 identity=50.38 coverage=85.7471264367816)
transmembrane_regions (db=TMHMM db_id=tmhmm from=274 to=296)
ACD38_20_9
GWF2_OP11_38_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

6096..6971
DNA (876bp) protein (292aa)
6096..6971 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:KKQ81295.1}; TaxID=1618433 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWF2_38_7.;"
ACD38_20_10
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

6968..7291
DNA (324bp) protein (108aa)
coiled-coil (db=Coil db_id=coil from=79 to=108 evalue=NA)
seg (db=Seg db_id=seg from=77 to=88)
Uncharacterized protein {ECO:0000313|EMBL:KKR17110.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
ACD38_20_11

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7303..8178
DNA (876bp) protein (292aa)
Protein translocase subunit SecF
Protein-export membrane protein SecF n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C4J4_SPHTD (db=UNIREF evalue=5.0e-74 bit_score=281.0 identity=50.18 coverage=96.2328767123288)
transmembrane_regions (db=TMHMM db_id=tmhmm from=151 to=173)
transmembrane_regions (db=TMHMM db_id=tmhmm from=263 to=285)
ACD38_20_12
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(8175..8828)
DNA (654bp) protein (218aa)
polynucleotide adenylyltransferase/metal dependent phosphohydrolase
Poly A polymerase C-terminal region-like (db=superfamily db_id=SSF81891 from=23 to=215 evalue=6.5e-22)
TRNA-NUCLEOTIDYLTRANSFERASE/POLY(A) POLYMERASE FAMILY MEMBER (db=HMMPanther db_id=PTHR13734 from=29 to=200 evalue=1.2e-13)
TRNA NUCLEOTIDYLTRANSFERASE (db=HMMPanther db_id=PTHR13734:SF7 from=29 to=200 evalue=1.2e-13)
ACD38_20_13
GWC2_OP11_40_12, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

9803..11386
DNA (1584bp) protein (528aa)
single-stranded-DNA-specific exonuclease RecJ
seg (db=Seg db_id=seg from=219 to=237)
seg (db=Seg db_id=seg from=48 to=64)
seg (db=Seg db_id=seg from=180 to=194)
ACD38_20_14
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(11379..11606)
DNA (228bp) protein (76aa)
11379..11606 - (rbs_motif=TAA rbs_spacer=4bp)
Uncharacterized protein {ECO:0000313|EMBL:KKR17114.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
ACD38_20_15
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(11847..12023)
DNA (177bp) protein (59aa)
11847..12023 - (rbs_motif=TAA rbs_spacer=3bp)
Uncharacterized protein {ECO:0000313|EMBL:KKR17115.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
ACD38_20_16
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(12049..12318)
DNA (270bp) protein (90aa)
seg (db=Seg db_id=seg from=42 to=58)
Uncharacterized protein {ECO:0000313|EMBL:KKR17116.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
Displaying 16 items

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