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ACD38_34

Alias: ACD38_23838.13248.10

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD38_34_1
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria

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comp(163..1092)
DNA (930bp) protein (310aa)
163..1092 - (rbs_motif=TAA rbs_spacer=3bp)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_OP11_Curtissbacteria_40_16_curated
ACD38_34_2
GWC2_OP11_40_12, Daviesbacteria, Microgenomates, Bacteria

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comp(1096..1440)
DNA (345bp) protein (115aa)
Putative uncharacterized protein n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7A5D0_THEAQ (db=UNIREF evalue=3.0e-29 bit_score=130.0 identity=51.79 coverage=96.5217391304348)
hypothetical protein
DUF86 (db=HMMPfam db_id=PF01934 from=14 to=109 evalue=7.3e-27 interpro_id=IPR008201 interpro_description=Protein of unknown function DUF86)
Uncharacterized protein {ECO:0000313|EMBL:KKR42236.1}; TaxID=1618431 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWC2_40_12.;"
ACD38_34_3
GWC2_OP11_40_12, Daviesbacteria, Microgenomates, Bacteria

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comp(1433..1723)
DNA (291bp) protein (97aa)
DNA polymerase beta domain-containing protein
DNA polymerase beta domain protein region n=1 Tax=Thermus aquaticus Y51MC23 RepID=B7A8K4_THEAQ (db=UNIREF evalue=1.0e-19 bit_score=99.0 identity=48.35 coverage=92.7835051546392)
Nucleotidyltransferase (db=superfamily db_id=SSF81301 from=1 to=96 evalue=1.8e-21)
NTP_transf_2 (db=HMMPfam db_id=PF01909 from=15 to=93 evalue=7.6e-17 interpro_id=IPR002934 interpro_description=Nucleotidyl transferase domain GO=Molecular Function: nucleotidyltransferase activity (GO:0016779))
ACD38_34_4
GWC2_OP11_40_12, Daviesbacteria, Microgenomates, Bacteria

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comp(1731..2183)
DNA (453bp) protein (151aa)
pyrC; dihydroorotase
seg (db=Seg db_id=seg from=50 to=59)
DIHYDROOROTASE_2 (db=PatternScan db_id=PS00483 from=27 to=38 evalue=0.0 interpro_id=IPR002195 interpro_description=Dihydroorotase, conserved site GO=Molecular Function: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides (GO:0016812))
no description (db=Gene3D db_id=G3DSA:3.20.20.140 from=1 to=123 evalue=8.9e-38)
ACD38_34_5
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

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2892..3161
DNA (270bp) protein (90aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=19 to=41)
transmembrane_regions (db=TMHMM db_id=tmhmm from=61 to=83)
hypothetical protein alias=ACD38_23838.13248.10G0005,ACD38_23838.13248.10_5,ACD38_C00034G00005 id=43593 tax=ACD38 species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes organism_group=OP11 organism_desc=OP11
ACD38_34_6
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

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comp(3151..4206)
DNA (1056bp) protein (352aa)
DNA replication and repair protein RecF
DNA replication and repair protein recF n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVC4_9BACT (db=UNIREF evalue=2.0e-59 bit_score=233.0 identity=35.36 coverage=94.6022727272727)
RECF_2 (db=PatternScan db_id=PS00618 from=294 to=312 evalue=0.0 interpro_id=IPR018078 interpro_description=DNA-binding, RecF, conserved site GO=Molecular Function: single-stranded DNA binding (GO:0003697), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA repair (GO:0006281))
recf: DNA replication and repair protein Rec (db=HMMTigr db_id=TIGR00611 from=1 to=349 evalue=1.8e-74 interpro_id=IPR001238 interpro_description=DNA-binding, RecF GO=Molecular Function: single-stranded DNA binding (GO:0003697), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA repair (GO:0006281))
ACD38_34_7
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

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comp(4292..5665)
DNA (1374bp) protein (458aa)
major facilitator family transporter
transmembrane_regions (db=TMHMM db_id=tmhmm from=414 to=436)
transmembrane_regions (db=TMHMM db_id=tmhmm from=19 to=41)
transmembrane_regions (db=TMHMM db_id=tmhmm from=138 to=160)
ACD38_34_8
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

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comp(5708..6652)
DNA (945bp) protein (315aa)
mutM; formamidopyrimidine-DNA glycosidase (EC:3.2.2.23 4.2.99.18)
formamidopyrimidine-DNA glycosylase n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI0001743CF7 (db=UNIREF evalue=3.0e-50 bit_score=202.0 identity=42.67 coverage=68.5714285714286)
seg (db=Seg db_id=seg from=12 to=29)
ZF_FPG_1 (db=PatternScan db_id=PS01242 from=289 to=313 evalue=0.0 interpro_id=IPR015887 interpro_description=DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-(apurinic or apyrimidinic site) lyase activity (GO:0003906), Biological Process: DNA repair (GO:0006281), Molecular Function: zinc ion binding (GO:0008270), Molecular Function: hydrolase activity, hydrolyzing N-glycosyl compounds (GO:0016799))
ACD38_34_9
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

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comp(6681..7637)
DNA (957bp) protein (319aa)
hypothetical protein
seg (db=Seg db_id=seg from=131 to=141)
MALONYL COA-ACYL CARRIER PROTEIN TRANSACYLASE (db=HMMPanther db_id=PTHR10982:SF4 from=6 to=305 evalue=5.7e-55)
MALONYL COENZYME A-ACYL CARRIER PROTEIN TRANSACYLASE-RELATED (db=HMMPanther db_id=PTHR10982 from=6 to=305 evalue=5.7e-55)
ACD38_34_10
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(7706..8224)
DNA (519bp) protein (173aa)
PaaX family transcrtiptional regulator
PaaX_C (db=HMMPfam db_id=PF08223 from=94 to=166 evalue=5.1e-13 interpro_id=IPR013225 interpro_description=PaaX-like, C-terminal)
CRISPR_Cas2 (db=HMMPfam db_id=PF09827 from=100 to=145 evalue=0.00015 interpro_id=IPR019199 interpro_description=Virulence-associated protein D / CRISPR associated protein Cas2)
Repressor in the phenylacetic acid catabolism {ECO:0000313|EMBL:KKR16382.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
ACD38_34_11
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

8337..8924
DNA (588bp) protein (196aa)
ylfA; hypothetical protein
Putative uncharacterized protein n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KSI7_9BACT (db=UNIREF evalue=8.0e-38 bit_score=159.0 identity=53.49 coverage=87.2448979591837)
seg (db=Seg db_id=seg from=113 to=127)
seg (db=Seg db_id=seg from=8 to=19)
ACD38_34_12
GWF2_OP11_38_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(8911..9693)
DNA (783bp) protein (261aa)
ABC transporter
seg (db=Seg db_id=seg from=236 to=245)
transmembrane_regions (db=TMHMM db_id=tmhmm from=48 to=67)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
ACD38_34_13
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(9690..10436)
DNA (747bp) protein (249aa)
ccmA; multidrug ABC transporter ATPase
ABC transporter, ATPase subunit n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI000174615A (db=UNIREF evalue=9.0e-54 bit_score=213.0 identity=46.72 coverage=95.5823293172691)
seg (db=Seg db_id=seg from=145 to=158)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=6 to=225 evalue=1.9e-78)
ACD38_34_14
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(10643..11644)
DNA (1002bp) protein (334aa)
Fructose-bisphosphate aldolase n=1 Tax=Chlorobaculum parvum NCIB 8327 RepID=B3QL48_CHLP8 (db=UNIREF evalue=7.0e-104 bit_score=380.0 identity=57.49 coverage=98.8023952095808)
Fructose-bisphosphate aldolase (EC:4.1.2.13)
Fructose-bisphosphate aldolase (EC:4.1.2.13)
ACD38_34_15
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(11675..12661)
DNA (987bp) protein (329aa)
fructose-1,6-bisphosphatase (EC:3.1.3.11)
FBPase_glpX (db=HMMPfam db_id=PF03320 from=41 to=316 evalue=4.2e-41 interpro_id=IPR004464 interpro_description=GlpX GO=Biological Process: glycerol metabolic process (GO:0006071))
no description (db=Gene3D db_id=G3DSA:3.40.190.90 from=128 to=279 evalue=1.7e-23)
Carbohydrate phosphatase (db=superfamily db_id=SSF56655 from=1 to=279 evalue=9.9e-20)
ACD38_34_16
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(12648..13286)
DNA (639bp) protein (213aa)
group 1 glycosyl transferase
GLYCOSYL TRANSFERASE (db=HMMPanther db_id=PTHR12526:SF21 from=1 to=208 evalue=1.2e-51)
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526 from=1 to=208 evalue=1.2e-51)
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=1 to=207 evalue=1.4e-35)
Displaying 16 items

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