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ACD38_55

Alias: ACD38_31492.12503.10

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD38_55_1
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

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1527..3002
DNA (1476bp) protein (492aa)
hypothetical protein
hypothetical protein
Isoleucyl-tRNA synthetase n=8 Tax=Chlamydia trachomatis RepID=SYI_CHLT2 (db=UNIREF evalue=6.0e-97 bit_score=358.0 identity=42.16 coverage=93.2926829268293)
coiled-coil (db=Coil db_id=coil from=427 to=448 evalue=NA)
ACD38_55_2
GWF2_OP11_38_7, Daviesbacteria, Microgenomates, Bacteria

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3002..4048
DNA (1047bp) protein (349aa)
mrdB; cell wall shape-determining protein
seg (db=Seg db_id=seg from=264 to=279)
seg (db=Seg db_id=seg from=167 to=178)
seg (db=Seg db_id=seg from=66 to=80)
ACD38_55_3
GWC2_OP11_40_12, Daviesbacteria, Microgenomates, Bacteria

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4059..4409
DNA (351bp) protein (117aa)
ribosomal protein L21; K02888 large subunit ribosomal protein L21 (db=KEGG evalue=2.0e-11 bit_score=71.6 identity=40.0 coverage=77.7777777777778)
seg (db=Seg db_id=seg from=102 to=116)
Ribosomal_L21p (db=HMMPfam db_id=PF00829 from=4 to=95 evalue=4.9e-19 interpro_id=IPR001787 interpro_description=Ribosomal protein L21 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
L21p-like (db=superfamily db_id=SSF141091 from=3 to=96 evalue=1.5e-13)
ACD38_55_4
GWF2_OP11_38_7, Daviesbacteria, Microgenomates, Bacteria

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4497..4742
DNA (246bp) protein (82aa)
rpmA; 50S ribosomal protein L27
seg (db=Seg db_id=seg from=64 to=81)
Ribosomal_L27 (db=HMMPfam db_id=PF01016 from=2 to=80 evalue=2.4e-29 interpro_id=IPR001684 interpro_description=Ribosomal protein L27 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
RIBOSOMALL27 (db=FPrintScan db_id=PR00063 from=54 to=78 evalue=6.7e-28 interpro_id=IPR001684 interpro_description=Ribosomal protein L27 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD38_55_5
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

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4758..5609
DNA (852bp) protein (284aa)
ParB-like partition protein
parB_part: ParB-like partition proteins (db=HMMTigr db_id=TIGR00180 from=1 to=181 evalue=3.0e-55 interpro_id=IPR004437 interpro_description=ParB-like partition protein GO=Molecular Function: DNA binding (GO:0003677))
no description (db=HMMSmart db_id=SM00470 from=6 to=95 evalue=1.6e-31 interpro_id=IPR003115 interpro_description=ParB-like nuclease GO=Molecular Function: DNA binding (GO:0003677))
ParB/Sulfiredoxin (db=superfamily db_id=SSF110849 from=3 to=150 evalue=2.0e-31 interpro_id=IPR003115 interpro_description=ParB-like nuclease GO=Molecular Function: DNA binding (GO:0003677))
ACD38_55_6
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

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comp(5611..6216)
DNA (606bp) protein (202aa)
hypothetical protein
Signal peptidase I (SPase I) (Leader peptidase I) n=2 Tax=Anaerococcus RepID=C7HUQ8_9FIRM (db=UNIREF evalue=8.0e-32 bit_score=139.0 identity=40.12 coverage=82.6732673267327)
transmembrane_regions (db=TMHMM db_id=tmhmm from=29 to=51)
SPASE_I_2 (db=PatternScan db_id=PS00760 from=103 to=115 evalue=0.0 interpro_id=IPR019757 interpro_description=Peptidase S26A, signal peptidase I, lysine active site GO=Molecular Function: serine-type peptidase activity (GO:0008236), Cellular Component: integral to membrane (GO:0016021))
ACD38_55_7
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria

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6362..7471
DNA (1110bp) protein (370aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
seg (db=Seg db_id=seg from=9 to=23)
transmembrane_regions 7..26 Tax=RIFCSPHIGHO2_02_FULL_OP11_Curtissbacteria_40_16_curated
ACD38_55_8
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria

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7513..8742
DNA (1230bp) protein (410aa)
polysaccharide biosynthesis protein
O-antigen transporter related protein n=1 Tax=Methanothermobacter thermautotrophicus str. Delta H RepID=O26479_METTH (db=UNIREF evalue=2.0e-32 bit_score=143.0 identity=28.39 coverage=92.9268292682927)
seg (db=Seg db_id=seg from=78 to=92)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
ACD38_55_9
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

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8742..9434
DNA (693bp) protein (231aa)
type 11 methyltransferase
Putative uncharacterized protein n=1 Tax=Kordia algicida OT-1 RepID=A9ED19_9FLAO (db=UNIREF evalue=8.0e-22 bit_score=107.0 identity=33.85 coverage=80.5194805194805)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=18 to=179 evalue=1.7e-17)
MetW (db=HMMPfam db_id=PF07021 from=18 to=167 evalue=3.9e-10 interpro_id=IPR010743 interpro_description=Methionine biosynthesis MetW)
ACD38_55_10
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

9421..10428
DNA (1008bp) protein (336aa)
putative glycosyltransferase
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=1 to=274 evalue=1.8e-56)
no description (db=Gene3D db_id=G3DSA:3.90.550.10 from=5 to=225 evalue=1.6e-41)
Glycos_transf_2 (db=HMMPfam db_id=PF00535 from=7 to=182 evalue=3.1e-32 interpro_id=IPR001173 interpro_description=Glycosyl transferase, family 2)
ACD38_55_11
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(10388..11539)
DNA (1152bp) protein (384aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=22 to=44)
seg (db=Seg db_id=seg from=3 to=14)
seg (db=Seg db_id=seg from=41 to=56)
seg (db=Seg db_id=seg from=117 to=140)
ACD38_55_12
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

11542..12540
DNA (999bp) protein (333aa)
hypothetical protein
seg (db=Seg db_id=seg from=122 to=136)
transmembrane_regions (db=TMHMM db_id=tmhmm from=248 to=270)
transmembrane_regions (db=TMHMM db_id=tmhmm from=121 to=152)
Displaying 12 items

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