Alias: ACD38_87640.14398.10
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACD38_59_1
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria
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Not on your lists |
1..1230
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
seg (db=Seg db_id=seg from=32 to=54)
seg (db=Seg db_id=seg from=240 to=254)
transmembrane_regions 13..35 Tax=RIFCSPHIGHO2_02_FULL_OP11_Curtissbacteria_40_16_curated
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ACD38_59_2
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria
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Not on your lists |
1238..1687
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transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
transmembrane_regions 12..34 Tax=RIFCSPHIGHO2_02_FULL_OP11_Curtissbacteria_40_16_curated
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ACD38_59_3
GWC2_OP11_40_12, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
1690..2145
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seg (db=Seg db_id=seg from=62 to=73)
seg (db=Seg db_id=seg from=5 to=21)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=26)
Uncharacterized protein {ECO:0000313|EMBL:KKR41568.1}; TaxID=1618431 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWC2_40_12.;"
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ACD38_59_4
GWF2_OP11_38_7, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(2210..3310)
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DNA polymerase III subunit beta (EC:2.7.7.7)
seg (db=Seg db_id=seg from=302 to=316)
dnan: DNA polymerase III, beta subunit (db=HMMTigr db_id=TIGR00663 from=1 to=365 evalue=1.2e-80 interpro_id=IPR001001 interpro_description=DNA polymerase III, beta chain GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Biological Process: DNA replication (GO:0006260), Molecular Function: 3'-5' exonuclease activity (GO:0008408), Cellular Component: DNA polymerase III complex (GO:0009360))
no description (db=HMMSmart db_id=SM00480 from=17 to=361 evalue=7.4e-78 interpro_id=IPR001001 interpro_description=DNA polymerase III, beta chain GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Biological Process: DNA replication (GO:0006260), Molecular Function: 3'-5' exonuclease activity (GO:0008408), Cellular Component: DNA polymerase III complex (GO:0009360))
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ACD38_59_5
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(3316..3768)
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seg (db=Seg db_id=seg from=5 to=22)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=22)
Endonuc_Holl (db=HMMPfam db_id=PF10107 from=54 to=135 evalue=3.1e-11 interpro_id=IPR019287 interpro_description=Holliday junction resolvase-like)
seg 5..22 Tax=RIFCSPHIGHO2_02_FULL_OP11_Curtissbacteria_40_16_curated
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ACD38_59_6
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(3988..5319)
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chromosomal replication initiator protein DnaA
chromosomal replication initiator protein DnaA
Chromosomal replication initiator protein dnaA n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CDB9_THET1 (db=UNIREF evalue=4.0e-94 bit_score=348.0 identity=39.08 coverage=98.6486486486486)
seg (db=Seg db_id=seg from=313 to=325)
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ACD38_59_7
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria
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Not on your lists |
5485..5622
|
rpmH; Ribosomal protein L34
Ribosomal_L34 (db=HMMPfam db_id=PF00468 from=2 to=44 evalue=7.6e-19 interpro_id=IPR000271 interpro_description=Ribosomal protein L34 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
rpmH_bact: ribosomal protein L34 (db=HMMTigr db_id=TIGR01030 from=2 to=45 evalue=1.6e-16 interpro_id=IPR000271 interpro_description=Ribosomal protein L34 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
RL34_SHEON_Q8EKT3; (db=BlastProDom db_id=PD003101 from=3 to=40 evalue=8.0e-08 interpro_id=IPR000271 interpro_description=Ribosomal protein L34 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD38_59_8
GWF2_OP11_38_7, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
5622..5960
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seg (db=Seg db_id=seg from=95 to=105)
Ribonuclease_P (db=HMMPfam db_id=PF00825 from=2 to=107 evalue=1.4e-17 interpro_id=IPR000100 interpro_description=Ribonuclease P GO=Molecular Function: tRNA binding (GO:0000049), Molecular Function: ribonuclease P activity (GO:0004526), Biological Process: tRNA processing (GO:0008033))
Ribosomal protein S5 domain 2-like (db=superfamily db_id=SSF54211 from=6 to=110 evalue=1.2e-16 interpro_id=IPR020568 interpro_description=Ribosomal protein S5 domain 2-type fold)
no description (db=Gene3D db_id=G3DSA:3.30.230.10 from=2 to=110 evalue=2.1e-12 interpro_id=IPR014721 interpro_description=Ribosomal protein S5 domain 2-type fold, subgroup)
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ACD38_59_9
uncultured bacterium, Bacteria
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Not on your lists |
6105..6977
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inner membrane protein, 60 kDa
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=38)
transmembrane_regions (db=TMHMM db_id=tmhmm from=181 to=198)
transmembrane_regions (db=TMHMM db_id=tmhmm from=237 to=259)
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ACD38_59_10
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
7062..7529
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hypothetical protein
seg (db=Seg db_id=seg from=5 to=18)
no description (db=HMMSmart db_id=SM00393 from=74 to=153 evalue=4.9e-13 interpro_id=IPR001374 interpro_description=Single-stranded nucleic acid binding R3H GO=Molecular Function: nucleic acid binding (GO:0003676))
R3H (db=HMMPfam db_id=PF01424 from=99 to=152 evalue=1.3e-12 interpro_id=IPR001374 interpro_description=Single-stranded nucleic acid binding R3H GO=Molecular Function: nucleic acid binding (GO:0003676))
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ACD38_59_11
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria
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Not on your lists |
7561..8763
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=29)
transmembrane_regions (db=TMHMM db_id=tmhmm from=360 to=379)
transmembrane_regions (db=TMHMM db_id=tmhmm from=323 to=345)
transmembrane_regions (db=TMHMM db_id=tmhmm from=245 to=267)
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ACD38_59_12
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria
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Not on your lists |
8803..10032
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Membrane protein involved in the export of O-antigen and teichoic acid
transmembrane_regions (db=TMHMM db_id=tmhmm from=351 to=370)
transmembrane_regions (db=TMHMM db_id=tmhmm from=375 to=397)
seg (db=Seg db_id=seg from=89 to=106)
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ACD38_59_13
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria
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Not on your lists |
10053..10460
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ribonuclease HI
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=3 to=133 evalue=5.4e-29 interpro_id=IPR012337 interpro_description=Polynucleotidyl transferase, ribonuclease H fold GO=Molecular Function: nucleic acid binding (GO:0003676))
no description (db=Gene3D db_id=G3DSA:3.30.420.10 from=3 to=132 evalue=9.3e-17)
RnaseH (db=HMMPfam db_id=PF00075 from=3 to=131 evalue=1.2e-15 interpro_id=IPR002156 interpro_description=Ribonuclease H GO=Molecular Function: nucleic acid binding (GO:0003676), Molecular Function: ribonuclease H activity (GO:0004523))
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ACD38_59_14
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria
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Not on your lists |
10643..13504
|
GDP-mannose 4,6 dehydratase ISS
seg (db=Seg db_id=seg from=527 to=541)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
transmembrane_regions (db=TMHMM db_id=tmhmm from=355 to=377)
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ACD38_59_15
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
13520..13774
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hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
transmembrane_regions (db=TMHMM db_id=tmhmm from=47 to=69)
MtN3_slv (db=HMMPfam db_id=PF03083 from=4 to=79 evalue=3.8e-12 interpro_id=IPR018169 interpro_description=MtN3/saliva-related transmembrane protein, conserved region GO=Cellular Component: membrane (GO:0016020))
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ACD38_59_16
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
13821..14435
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hypothetical protein
Ribosomal protein L25-like (db=superfamily db_id=SSF50715 from=2 to=193 evalue=1.5e-39 interpro_id=IPR011035 interpro_description=Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO=Biological Process: translation (GO:0006412))
ctc_TL5: ribosomal protein L25, Ctc-form (db=HMMTigr db_id=TIGR00731 from=6 to=184 evalue=8.6e-29 interpro_id=IPR001021 interpro_description=Ribosomal protein L25 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: 5S rRNA binding (GO:0008097))
Ribosomal_L25p (db=HMMPfam db_id=PF01386 from=6 to=92 evalue=3.2e-19 interpro_id=IPR020055 interpro_description=Ribosomal protein L25, N-terminal GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: 5S rRNA binding (GO:0008097))
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