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ACD38_60

Alias: ACD38_88255.10741.10

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD38_60_1

Not on your lists

comp(1..198)
DNA (198bp) protein (66aa)
seg (db=Seg db_id=seg from=55 to=64)
Uncharacterized protein {ECO:0000313|EMBL:EKD84568.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD38_60_2

Not on your lists

1253..1657
DNA (405bp) protein (135aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=34 to=56)
seg (db=Seg db_id=seg from=39 to=57)
Uncharacterized protein {ECO:0000313|EMBL:EKD84561.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD38_60_3
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

comp(1936..2169)
DNA (234bp) protein (78aa)
hypothetical protein
YcfA (db=HMMPfam db_id=PF07927 from=10 to=59 evalue=1.5e-13 interpro_id=IPR012933 interpro_description=YcfA-like)
YcfA/nrd intein domain (db=superfamily db_id=SSF54786 from=3 to=75 evalue=2.8e-13 interpro_id=IPR015146 interpro_description=Ribonucleotide reductase, stirrup)
no description (db=Gene3D db_id=G3DSA:3.30.920.30 from=3 to=75 evalue=7.5e-12)
ACD38_60_4
GWC2_OP11_40_12, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(2173..2460)
DNA (288bp) protein (96aa)
hypothetical protein
coiled-coil (db=Coil db_id=coil from=50 to=71 evalue=NA)
UPF0150 (db=HMMPfam db_id=PF03681 from=23 to=70 evalue=2.9e-20 interpro_id=IPR005357 interpro_description=Uncharacterised protein family UPF0150)
TTHA1013-like (db=superfamily db_id=SSF143100 from=22 to=92 evalue=5.3e-16)
ACD38_60_5
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

comp(2499..3137)
DNA (639bp) protein (213aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=30)
seg (db=Seg db_id=seg from=35 to=43)
seg (db=Seg db_id=seg from=52 to=68)
transmembrane_regions 12..30 Tax=RIFCSPHIGHO2_02_FULL_OP11_Curtissbacteria_40_16_curated
ACD38_60_6
GWF2_OP11_38_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

3167..3415
DNA (249bp) protein (83aa)
seg (db=Seg db_id=seg from=59 to=75)
alpha/beta knot (db=superfamily db_id=SSF75217 from=14 to=67 evalue=2.3e-07)
SpoU_methylase (db=HMMPfam db_id=PF00588 from=36 to=73 evalue=4.7e-06 interpro_id=IPR001537 interpro_description=tRNA/rRNA methyltransferase, SpoU GO=Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396), Molecular Function: RNA methyltransferase activity (GO:0008173))
RRNA METHYLASE (db=HMMPanther db_id=PTHR12029:SF7 from=16 to=65 evalue=9.4e-05)
ACD38_60_7
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

3393..3599
DNA (207bp) protein (69aa)
3393..3599 + (rbs_motif=TAAT rbs_spacer=5bp)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_OP11_Curtissbacteria_40_16_curated
ACD38_60_8
GWF2_OP11_38_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

3587..4255
DNA (669bp) protein (223aa)
hypothetical protein
seg (db=Seg db_id=seg from=48 to=63)
DUF1814 (db=HMMPfam db_id=PF08843 from=23 to=158 evalue=2.6e-17 interpro_id=IPR014942 interpro_description=Protein of unknown function DUF1814)
Uncharacterized protein {ECO:0000313|EMBL:KKQ82557.1}; TaxID=1618433 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWF2_38_7.;"
ACD38_60_9
GWC2_OP11_40_12, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

4445..4912
DNA (468bp) protein (156aa)
tRNA/rRNA methyltransferase SpoU
RRNA METHYLASE (db=HMMPanther db_id=PTHR12029:SF7 from=1 to=145 evalue=9.3e-32)
RNA METHYLTRANSFERASE (db=HMMPanther db_id=PTHR12029 from=1 to=145 evalue=9.3e-32)
alpha/beta knot (db=superfamily db_id=SSF75217 from=1 to=143 evalue=1.8e-30)
ACD38_60_10
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

5006..5482
DNA (477bp) protein (159aa)
5006..5482 + (rbs_motif=TAAT rbs_spacer=8bp)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_OP11_Curtissbacteria_40_16_curated
ACD38_60_11
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(5511..5903)
DNA (393bp) protein (131aa)
PilT-like protein
PIN domain-like (db=superfamily db_id=SSF88723 from=1 to=130 evalue=2.3e-19)
PIN (db=HMMPfam db_id=PF01850 from=3 to=122 evalue=5.3e-10 interpro_id=IPR002716 interpro_description=PilT protein, N-terminal)
Uncharacterized protein {ECO:0000313|EMBL:KKR15585.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
ACD38_60_12
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(5900..6184)
DNA (285bp) protein (95aa)
5900..6184 - (rbs_motif=TAA rbs_spacer=9bp)
Uncharacterized protein {ECO:0000313|EMBL:KKR15584.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
ACD38_60_13
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(6309..7457)
DNA (1149bp) protein (383aa)
seg (db=Seg db_id=seg from=345 to=358)
seg (db=Seg db_id=seg from=206 to=217)
transmembrane_regions (db=TMHMM db_id=tmhmm from=36 to=58)
seg (db=Seg db_id=seg from=95 to=112)
ACD38_60_14
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

7834..9132
DNA (1299bp) protein (433aa)
coiled-coil (db=Coil db_id=coil from=224 to=259 evalue=NA)
seg (db=Seg db_id=seg from=21 to=46)
seg (db=Seg db_id=seg from=222 to=254)
seg (db=Seg db_id=seg from=384 to=392)
ACD38_60_15
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

9183..10073
DNA (891bp) protein (297aa)
seg (db=Seg db_id=seg from=210 to=233)
seg (db=Seg db_id=seg from=278 to=293)
laminin G, domain-containing 2 Tax=RIFCSPHIGHO2_02_FULL_OP11_Curtissbacteria_40_16_curated
laminin G, domain-containing 2
ACD38_60_16
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

10086..10364
DNA (279bp) protein (93aa)
10086..10364 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:KKR15580.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
Displaying 16 items

View Taxonomy