Alias: ACD38_11190.5695.10
name | lists | location/seqs | annotations | notes |
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ACD38_79_1
GWC2_OP11_40_12, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(1..486)
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50S ribosomal protein L5
60S RIBOSOMAL PROTEIN L11-RELATED (db=HMMPanther db_id=PTHR11994 from=1 to=162 evalue=2.9e-68 interpro_id=IPR002132 interpro_description=Ribosomal protein L5 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
50S RIBOSOMAL PROTEIN L5 (db=HMMPanther db_id=PTHR11994:SF4 from=1 to=162 evalue=2.9e-68)
Ribosomal protein, L5p/L5a/L11e/organellar L5 types (db=HMMPIR db_id=PIRSF002161 from=1 to=162 evalue=1.2e-57 interpro_id=IPR002132 interpro_description=Ribosomal protein L5 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD38_79_2
GWF2_OP11_38_7, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(473..793)
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rplX; 50S ribosomal protein L24
RIBOSOMAL_L24 (db=PatternScan db_id=PS01108 from=6 to=23 evalue=0.0 interpro_id=IPR005825 interpro_description=Ribosomal protein L24/L26, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
rplX_bact: ribosomal protein L24 (db=HMMTigr db_id=TIGR01079 from=1 to=100 evalue=2.8e-33 interpro_id=IPR003256 interpro_description=Ribosomal protein L24 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Translation proteins SH3-like domain (db=superfamily db_id=SSF50104 from=2 to=99 evalue=1.7e-27 interpro_id=IPR008991 interpro_description=Translation protein SH3-like)
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ACD38_79_3
GWF2_OP11_38_7, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(810..1178)
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ribosomal protein L14
rplN_bact: ribosomal protein L14 (db=HMMTigr db_id=TIGR01067 from=1 to=122 evalue=2.1e-63 interpro_id=IPR005745 interpro_description=Ribosomal protein L14, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934))
50S/60S RIBOSOMAL PROTEIN L14/L23 (db=HMMPanther db_id=PTHR11761 from=1 to=122 evalue=2.2e-55 interpro_id=IPR000218 interpro_description=Ribosomal protein L14b/L23e GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
50S RIBOSOMAL PROTEIN L14 (db=HMMPanther db_id=PTHR11761:SF3 from=1 to=122 evalue=2.2e-55 interpro_id=IPR005745 interpro_description=Ribosomal protein L14, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934))
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ACD38_79_4
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(1218..1601)
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SSU ribosomal protein S17p
seg (db=Seg db_id=seg from=113 to=127)
30S RIBOSOMAL PROTEIN S17 (db=HMMPanther db_id=PTHR10744:SF1 from=1 to=103 evalue=3.5e-18)
40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER (db=HMMPanther db_id=PTHR10744 from=1 to=103 evalue=3.5e-18 interpro_id=IPR000266 interpro_description=Ribosomal protein S17 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD38_79_5
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(1626..1961)
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coiled-coil (db=Coil db_id=coil from=87 to=108 evalue=NA)
coiled-coil (db=Coil db_id=coil from=14 to=35 evalue=NA)
seg (db=Seg db_id=seg from=30 to=52)
Ribosomal_L29 (db=HMMPfam db_id=PF00831 from=8 to=63 evalue=2.8e-08 interpro_id=IPR001854 interpro_description=Ribosomal protein L29 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD38_79_6
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(1964..2374)
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rplP; 50S ribosomal protein L16
rplP_bact: ribosomal protein L16 (db=HMMTigr db_id=TIGR01164 from=4 to=129 evalue=2.2e-69 interpro_id=IPR000114 interpro_description=Ribosomal protein L16 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
Ribosomal protein L16p/L10e (db=superfamily db_id=SSF54686 from=5 to=136 evalue=6.4e-53 interpro_id=IPR016180 interpro_description=Ribosomal protein L10e/L16 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
50S/60S RIBOSOMAL PROTEIN L16 (db=HMMPanther db_id=PTHR12220 from=1 to=136 evalue=2.7e-52 interpro_id=IPR000114 interpro_description=Ribosomal protein L16 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
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ACD38_79_7
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(2374..2559)
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rpsC; 30S ribosomal protein S3
RIBOSOMAL_S3 (db=PatternScan db_id=PS00548 from=15 to=49 evalue=0.0 interpro_id=IPR018280 interpro_description=Ribosomal protein S3, conserved site GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
30S/40S RIBOSOMAL PROTEIN S3 (db=HMMPanther db_id=PTHR11760 from=1 to=59 evalue=7.5e-24)
CHLOROPLAST 30S RIBOSOMAL PROTEIN S3 (db=HMMPanther db_id=PTHR11760:SF10 from=1 to=59 evalue=7.5e-24)
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ACD38_79_8
GWF2_OP11_38_7, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(3060..3551)
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LSU ribosomal protein L22p (L17e)
seg (db=Seg db_id=seg from=82 to=93)
Ribosomal_L22 (db=HMMPfam db_id=PF00237 from=7 to=107 evalue=3.6e-25 interpro_id=IPR001063 interpro_description=Ribosomal protein L22/L17 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal protein L22 (db=superfamily db_id=SSF54843 from=1 to=109 evalue=5.7e-25 interpro_id=IPR001063 interpro_description=Ribosomal protein L22/L17 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD38_79_9
uncultured bacterium, Bacteria
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Not on your lists |
comp(3567..3851)
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30S ribosomal protein S19
RIBOSOMAL_S19 (db=PatternScan db_id=PS00323 from=53 to=77 evalue=0.0 interpro_id=IPR020934 interpro_description=Ribosomal protein S19 conserved site GO=Molecular Function: RNA binding (GO:0003723))
rpsS_bact: ribosomal protein S19 (db=HMMTigr db_id=TIGR01050 from=1 to=92 evalue=1.2e-49 interpro_id=IPR005732 interpro_description=Ribosomal protein S19, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
RIBOSOMAL PROTEIN S19P FAMILY MEMBER (db=HMMPanther db_id=PTHR11880 from=1 to=91 evalue=6.2e-37 interpro_id=IPR002222 interpro_description=Ribosomal protein S19/S15 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD38_79_10
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(3851..4615)
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rplB; 50S ribosomal protein L2
seg (db=Seg db_id=seg from=213 to=222)
seg (db=Seg db_id=seg from=5 to=27)
rplB_bact: ribosomal protein L2 (db=HMMTigr db_id=TIGR01171 from=2 to=254 evalue=1.3e-109 interpro_id=IPR005880 interpro_description=Ribosomal protein L2, bacterial-type GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934), Molecular Function: transferase activity (GO:0016740))
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ACD38_79_11
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(4620..5048)
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rplW; 50S ribosomal protein L23
Ribosomal proteins S24e, L23 and L15e (db=superfamily db_id=SSF54189 from=1 to=92 evalue=7.9e-18 interpro_id=IPR012678 interpro_description=Ribosomal protein L23/L15e, core GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
no description (db=Gene3D db_id=G3DSA:3.30.70.330 from=3 to=94 evalue=1.2e-16 interpro_id=IPR012677 interpro_description=Nucleotide-binding, alpha-beta plait GO=Molecular Function: nucleotide binding (GO:0000166))
Ribosomal_L23 (db=HMMPfam db_id=PF00276 from=3 to=91 evalue=2.4e-13 interpro_id=IPR013025 interpro_description=Ribosomal protein L25/L23 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD38_79_12
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(5045..5731)
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50S ribosomal protein L4
Ribosomal protein L4 (db=superfamily db_id=SSF52166 from=21 to=219 evalue=1.7e-57 interpro_id=IPR002136 interpro_description=Ribosomal protein L4/L1e GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_L4 (db=HMMPfam db_id=PF00573 from=37 to=221 evalue=1.7e-55 interpro_id=IPR002136 interpro_description=Ribosomal protein L4/L1e GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
50S RIBOSOMAL PROTEIN L4 (db=HMMPanther db_id=PTHR10746:SF2 from=38 to=219 evalue=1.1e-52 interpro_id=IPR015498 interpro_description=Ribosomal protein L4)
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