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ACD38_19_10

Organism: ACD38

near complete RP 48 / 55 MC: 11 BSCG 45 / 51 MC: 4 ASCG 0 / 38
Location: comp(6679..7449)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase D similarity KEGG
DB: KEGG
  • Identity: 44.8
  • Coverage: 259.0
  • Bit_score: 191
  • Evalue 3.70e-46
PSI_RLU (db=PatternScan db_id=PS01129 from=56 to=70 evalue=0.0 interpro_id=IPR006224 interpro_description=Pseudouridine synthase, RluC/RluD, conserved site GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
Pseudouridine synthase (db=superfamily db_id=SSF55120 from=7 to=253 evalue=2.2e-64 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.20e-64

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Taxonomy

R_OP11_Curtissbacteria_40_16 → Curtissbacteria → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 771
GTGGAATTTTCTCATTTAATTCGAAAACTATACGAGGATGATTATTTATTGGTGGTTGAAAAGCCTGCTGGATTGGTGGTGGATCCTGCCGATACTGTTAAAGAAGAAACTCTTGCGGATATTTTAATCCGGGATTTTAAGATTAATCTGCCGCGGGGTGGAATTGTGCACAGGCTGGATAAAGATACCTCGGGAATATTGCTTGTTGCCAAAACCCAGGCGGCTTTGGAAAATCTGCAGTTTCAATTTAAGGATAGGAAAACAAAGAAAGAATACCTGGCTTTAGTGCATGGTATTGTTGCTCTGGCCGGGGTGGTGGAAGGAAATATCGGCAGGAATCCGGGAGACAGAGAAAAGTTTACAGTTTTAGCAGAGGGTAAAGAAGCGGTGACTGAGTATGAACCGGTTGAGCAATGCACAATTGACAATGAACAATTGACAAAAATGTTTCCGGATTTTAATAAGATTCAGATGAGGAAGCTTGAGAGACAAAAATATGGCAAGCTTACTTTGCTTCGCTGTAAACCGAAAACTGGACGGACTCATCAAATTAGGGTACATTTAAAGCACATAGGTCATGCGATAGTTTCGGATGAGAAATATGTCGGCAGGAAAATGTTCCGGCTGGATAAGCGGTGGTGTCCGAGGATGTTTCTGCATGCAGCGAAATTAGGTTTTGAACATCCGGAAAACGGGGAATGGATGGAGTTTGAAAGTGAATTGCCGGAAGACTTAAAAAAAACTCTAGATCTTTTAGAATCTGGATCCTAG
PROTEIN sequence
Length: 257
VEFSHLIRKLYEDDYLLVVEKPAGLVVDPADTVKEETLADILIRDFKINLPRGGIVHRLDKDTSGILLVAKTQAALENLQFQFKDRKTKKEYLALVHGIVALAGVVEGNIGRNPGDREKFTVLAEGKEAVTEYEPVEQCTIDNEQLTKMFPDFNKIQMRKLERQKYGKLTLLRCKPKTGRTHQIRVHLKHIGHAIVSDEKYVGRKMFRLDKRWCPRMFLHAAKLGFEHPENGEWMEFESELPEDLKKTLDLLESGS*