Alias: ACD38_47761.17928.11
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACD38_19_1
GWF2_OP11_38_7, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(3..158)
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hypothetical protein
YebC-like (db=superfamily db_id=SSF75625 from=3 to=52 evalue=3.8e-16 interpro_id=IPR002876 interpro_description=Protein of unknown function DUF28)
DUF28 (db=HMMPfam db_id=PF01709 from=5 to=51 evalue=1.6e-15 interpro_id=IPR002876 interpro_description=Protein of unknown function DUF28)
no description (db=Gene3D db_id=G3DSA:1.10.10.200 from=1 to=52 evalue=1.7e-12 interpro_id=IPR017856 interpro_description=Integrase, N-terminal zinc-binding domain-like)
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ACD38_19_2
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
278..997
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hypothetical protein
TPR repeat-containing protein n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CG23_THET1 (db=UNIREF evalue=2.0e-27 bit_score=125.0 identity=33.8 coverage=86.6666666666667)
seg (db=Seg db_id=seg from=225 to=238)
TPR-like (db=superfamily db_id=SSF48452 from=3 to=95 evalue=1.1e-14)
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ACD38_19_3
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(994..1701)
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transmembrane_regions (db=TMHMM db_id=tmhmm from=2 to=20)
Uncharacterized protein {ECO:0000313|EMBL:KKR16079.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
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ACD38_19_4
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(1705..2751)
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seg (db=Seg db_id=seg from=31 to=49)
seg (db=Seg db_id=seg from=3 to=14)
transmembrane_regions (db=TMHMM db_id=tmhmm from=31 to=53)
Uncharacterized protein {ECO:0000313|EMBL:KKR16078.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
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ACD38_19_5
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
2877..3113
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seg (db=Seg db_id=seg from=65 to=73)
seg (db=Seg db_id=seg from=25 to=36)
Uncharacterized protein {ECO:0000313|EMBL:KKR16077.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
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ACD38_19_6
GWC2_OP11_40_12, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(3154..4365)
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tRNA-guanine transglycosylase, queuosine-34-forming (EC:2.4.2.29)
tRNA-guanine transglycosylase, queuosine-34-forming (EC:2.4.2.29)
Putative queuine tRNA-ribosyltransferase n=1 Tax=Archaeoglobus fulgidus RepID=TGT_ARCFU (db=UNIREF evalue=2.0e-101 bit_score=373.0 identity=47.06 coverage=99.2574257425743)
Q_tRNA_tgt: queuine tRNA-ribosyltransfera (db=HMMTigr db_id=TIGR00430 from=5 to=403 evalue=9.7e-164 interpro_id=IPR004803 interpro_description=Queuine tRNA-ribosyltransferase GO=Biological Process: tRNA processing (GO:0008033), Molecular Function: queuine tRNA-ribosyltransferase activity (GO:0008479), Biological Process: queuosine biosynthetic process (GO:0008616))
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ACD38_19_7
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(4358..4615)
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RelE-like (db=superfamily db_id=SSF143011 from=1 to=80 evalue=1.3e-15)
RelE_StbE: addiction module toxin, RelE/Stb (db=HMMTigr db_id=TIGR02385 from=2 to=84 evalue=0.00063 interpro_id=IPR012753 interpro_description=Addiction module toxin, RelE/StbE)
Uncharacterized protein {ECO:0000313|EMBL:KKR16075.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
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ACD38_19_8
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(4619..4903)
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ACD38_19_9
GWF2_OP11_38_7, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(4948..6657)
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Transporter, CPA2 family
transmembrane_regions (db=TMHMM db_id=tmhmm from=182 to=204)
seg (db=Seg db_id=seg from=150 to=172)
seg (db=Seg db_id=seg from=179 to=195)
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ACD38_19_10
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(6679..7449)
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ribosomal large subunit pseudouridine synthase D
PSI_RLU (db=PatternScan db_id=PS01129 from=56 to=70 evalue=0.0 interpro_id=IPR006224 interpro_description=Pseudouridine synthase, RluC/RluD, conserved site GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982))
Pseudouridine synthase (db=superfamily db_id=SSF55120 from=7 to=253 evalue=2.2e-64 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982))
RIBOSOMAL PSEUDOURIDINE SYNTHASE (db=HMMPanther db_id=PTHR10436 from=10 to=252 evalue=6.2e-57)
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ACD38_19_11
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(7457..7867)
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Cell wall-associated hydrolase n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZNH7_9BACT (db=UNIREF evalue=2.0e-31 bit_score=137.0 identity=46.56 coverage=94.1605839416058)
cell wall-associated hydrolase
Cysteine proteinases (db=superfamily db_id=SSF54001 from=30 to=133 evalue=4.4e-09)
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ACD38_19_12
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(7893..8282)
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hypothetical protein
CheY-like (db=superfamily db_id=SSF52172 from=4 to=127 evalue=9.1e-30 interpro_id=IPR011006 interpro_description=CheY-like)
no description (db=HMMSmart db_id=SM00448 from=7 to=122 evalue=2.1e-27 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
no description (db=Gene3D db_id=G3DSA:3.40.50.2300 from=4 to=127 evalue=9.2e-25)
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ACD38_19_13
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(8331..10559)
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Sensor protein resE
Sensor protein n=1 Tax=Geobacter sp. M18 RepID=C6MPJ4_9DELT (db=UNIREF evalue=1.0e-43 bit_score=182.0 identity=33.53 coverage=44.6837146702557)
seg (db=Seg db_id=seg from=28 to=46)
coiled-coil (db=Coil db_id=coil from=355 to=376 evalue=NA)
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ACD38_19_14
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
10644..11771
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aromatic ring-opening dioxygenase LigA
FMN-dependent nitroreductase-like (db=superfamily db_id=SSF55469 from=34 to=375 evalue=7.3e-10 interpro_id=IPR000415 interpro_description=Nitroreductase-like GO=Molecular Function: oxidoreductase activity (GO:0016491))
Uncharacterized protein {ECO:0000313|EMBL:KKR16068.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
hypothetical protein alias=ACD38_47761.17928.11G0014,ACD38_47761.17928.11_14,ACD38_C00019G00014 id=43415 tax=ACD38 species=Haloterrigena turkmenica genus=Haloterrigena taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota organism_group=OP11 organism_desc=OP11
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ACD38_19_15
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(11775..13055)
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moeY; hypothetical protein (db=KEGG evalue=4.0e-10 bit_score=69.7 identity=26.55 coverage=70.7259953161593)
seg (db=Seg db_id=seg from=386 to=398)
seg (db=Seg db_id=seg from=162 to=175)
ThiF (db=HMMPfam db_id=PF00899 from=161 to=300 evalue=6.7e-09 interpro_id=IPR000594 interpro_description=UBA/THIF-type NAD/FAD binding fold GO=Molecular Function: catalytic activity (GO:0003824))
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ACD38_19_16
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(13058..13813)
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13058..13813 - (rbs_motif=TAAT rbs_spacer=5bp)
Uncharacterized protein {ECO:0000313|EMBL:KKR16066.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
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ACD38_19_17
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(13858..14628)
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transcriptional regulator, XRE family (db=KEGG evalue=1.0e-10 bit_score=70.5 identity=25.73 coverage=85.2140077821012)
HTH_3 (db=HMMPfam db_id=PF01381 from=10 to=65 evalue=3.2e-08 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=1 to=69 evalue=1.1e-07 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
no description (db=HMMSmart db_id=SM00530 from=9 to=66 evalue=4.9e-07 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
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ACD38_19_18
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(14622..15143)
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Glutamate-rich protein grpB n=3 Tax=Bacillus cereus RepID=C2ZHC3_BACCE (db=UNIREF evalue=2.0e-19 bit_score=98.6 identity=38.95 coverage=91.9540229885057)
yqkA; hypothetical protein
UPF0157 (db=HMMPfam db_id=PF04229 from=6 to=168 evalue=2.1e-38 interpro_id=IPR007344 interpro_description=Uncharacterised protein family UPF0157)
Glutamate-rich protein grpB {ECO:0000313|EMBL:KKR16064.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
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ACD38_19_19
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria
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Not on your lists |
15246..15365
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15246..15365 + (rbs_motif=TAA rbs_spacer=12bp)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_OP11_Curtissbacteria_40_16_curated
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ACD38_19_20
uncultured bacterium, Bacteria
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Not on your lists |
15414..16052
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transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=30)
seg (db=Seg db_id=seg from=34 to=43)
seg (db=Seg db_id=seg from=52 to=68)
Uncharacterized protein {ECO:0000313|EMBL:EKD84994.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD38_19_21
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria
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Not on your lists |
16908..17966
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seg (db=Seg db_id=seg from=190 to=201)
seg 190..201 Tax=RIFCSPHIGHO2_02_FULL_OP11_Curtissbacteria_40_16_curated
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