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ACD38_39_12

Organism: ACD38

near complete RP 48 / 55 MC: 11 BSCG 45 / 51 MC: 4 ASCG 0 / 38
Location: 6325..6927

Top 3 Functional Annotations

Value Algorithm Source
rpsD; 30S ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 54.5
  • Coverage: 209.0
  • Bit_score: 214
  • Evalue 2.40e-53
RIBOSOMAL_S4 (db=PatternScan db_id=PS00632 from=92 to=116 evalue=0.0 interpro_id=IPR018079 interpro_description=Ribosomal protein S4, conserved site GO=Cellular Component: intracellular (GO:0005622), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
rpsD_bact: ribosomal protein S4 (db=HMMTigr db_id=TIGR01017 from=3 to=200 evalue=1.3e-92 interpro_id=IPR005709 interpro_description=Ribosomal protein S4, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.30e-92

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Taxonomy

GWA2_OP11_ACD38-rel_39_33 → Daviesbacteria → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 603
ATGGCAAGATATACAGGACCTAAACGTAGGTTATCCAGAAGAGAGGGTTTTGCTCTTTTTGCCAAAGATGCAAAGGCTTTAGAGAAAAAAGGAGCAGTACCGCCAGGACAGCACGGAATTGGCAGAAGAAGACGGATATCGGAATATGGTGTACAACTTAGGGAAAAACAAAAAGCTAAAAGAATTTTCGGGTTACTGGAAAAACAATTCAAGCGATACTTTGAGCAAGCCTCTAAAGTAAAAGGTGCAACTGGGCTTGCATTGCTTCAGGTTTTAGAAACCCGGCTAGATAATGTAGTTTATCGTTTAGGTTTTGCCAAGAGCCGGGATGGCGCAAGACAATTGGTTAGTCATGGACATATTAAAGTAGATGATAAAAAAGTGGCTATTCCTTCTTATCAAGTGGGCATAAATCAAACTATTGCAATCTCAGACAAATTAAGAGATAATACTCAGATCAAAAAGAGTTTAGAGGAATCTGAAACCTTGCCGGAGTGGCTTGAAAAACGCGCCACAGTGGGCAAGGTTTTAAGAAATCCTGCTAGAGAAGAAATGGAGCAGTCGATTGACGAACAACTTATCGTAGAGTTTTATTCTAGATAA
PROTEIN sequence
Length: 201
MARYTGPKRRLSRREGFALFAKDAKALEKKGAVPPGQHGIGRRRRISEYGVQLREKQKAKRIFGLLEKQFKRYFEQASKVKGATGLALLQVLETRLDNVVYRLGFAKSRDGARQLVSHGHIKVDDKKVAIPSYQVGINQTIAISDKLRDNTQIKKSLEESETLPEWLEKRATVGKVLRNPAREEMEQSIDEQLIVEFYSR*