Alias: ACD38_22853.26525.11
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACD38_39_1
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
176..550
|
30S ribosomal protein S8P
seg (db=Seg db_id=seg from=28 to=43)
RIBOSOMAL_S8 (db=PatternScan db_id=PS00053 from=94 to=111 evalue=0.0 interpro_id=IPR000630 interpro_description=Ribosomal protein S8 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal protein S8 (db=superfamily db_id=SSF56047 from=1 to=124 evalue=1.2e-39 interpro_id=IPR000630 interpro_description=Ribosomal protein S8 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD38_39_2
uncultured bacterium, Bacteria
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Not on your lists |
564..1127
|
50S ribosomal protein L6 n=1 Tax=Catonella morbi ATCC 51271 RepID=C4FV74_9FIRM (db=UNIREF evalue=2.0e-53 bit_score=211.0 identity=56.18 coverage=94.1489361702128)
rplF; 50S ribosomal protein L6
RIBOSOMAL_L6_1 (db=PatternScan db_id=PS00525 from=154 to=162 evalue=0.0 interpro_id=IPR002358 interpro_description=Ribosomal protein L6, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
L6_bact: ribosomal protein L6 (db=HMMTigr db_id=TIGR03654 from=2 to=176 evalue=1.7e-103 interpro_id=IPR019906 interpro_description=Ribosomal protein L6, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
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ACD38_39_3
GWF2_OP11_38_7, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
1131..1466
|
50S ribosomal protein L18
50S ribosomal protein L18 n=1 Tax=Prevotella sp. oral taxon 299 str. F0039 RepID=D3IDK6_9BACT (db=UNIREF evalue=8.0e-28 bit_score=125.0 identity=56.36 coverage=97.3214285714286)
L18_bact: ribosomal protein L18 (db=HMMTigr db_id=TIGR00060 from=2 to=111 evalue=2.0e-40 interpro_id=IPR004389 interpro_description=Ribosomal protein L18, bacterial GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Translational machinery components (db=superfamily db_id=SSF53137 from=19 to=111 evalue=6.8e-35)
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ACD38_39_4
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
1479..1970
|
30S ribosomal protein S5
seg (db=Seg db_id=seg from=44 to=65)
rpsE_bact: ribosomal protein S5 (db=HMMTigr db_id=TIGR01021 from=17 to=161 evalue=2.6e-55 interpro_id=IPR005712 interpro_description=Ribosomal protein S5, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
RIBOSOMAL S SUBUNIT (db=HMMPanther db_id=PTHR13718 from=18 to=158 evalue=1.2e-48 interpro_id=IPR000851 interpro_description=Ribosomal protein S5 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD38_39_5
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria
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Not on your lists |
1957..2412
|
50S ribosomal protein L15
seg (db=Seg db_id=seg from=22 to=44)
RIBOSOMAL_L15 (db=PatternScan db_id=PS00475 from=116 to=145 evalue=0.0 interpro_id=IPR001196 interpro_description=Ribosomal protein L15, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
rplO_bact: ribosomal protein L15 (db=HMMTigr db_id=TIGR01071 from=9 to=149 evalue=5.7e-25 interpro_id=IPR005749 interpro_description=Ribosomal protein L15, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934))
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ACD38_39_6
GWF2_OP11_38_7, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
2405..3697
|
hypothetical protein
hypothetical protein
Preprotein translocase subunit secY n=1 Tax=Desulfotomaculum reducens MI-1 RepID=A4J131_DESRM (db=UNIREF evalue=1.0e-82 bit_score=310.0 identity=48.61 coverage=89.7911832946636)
transmembrane_regions (db=TMHMM db_id=tmhmm from=174 to=196)
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ACD38_39_7
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
3706..4230
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adenylate kinase
ADENYLATE_KINASE (db=PatternScan db_id=PS00113 from=81 to=92 evalue=0.0 interpro_id=IPR000850 interpro_description=Adenylate kinase GO=Molecular Function: ATP binding (GO:0005524), Biological Process: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process (GO:0006139), Molecular Function: nucleobase, nucleoside, nucleotide kinase activity (GO:0019205))
ADENYLATE KINASE (db=HMMPanther db_id=PTHR23359:SF13 from=1 to=172 evalue=4.6e-55)
NUCLEOTIDE KINASE (db=HMMPanther db_id=PTHR23359 from=1 to=172 evalue=4.6e-55 interpro_id=IPR000850 interpro_description=Adenylate kinase GO=Molecular Function: ATP binding (GO:0005524), Biological Process: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process (GO:0006139), Molecular Function: nucleobase, nucleoside, nucleotide kinase activity (GO:0019205))
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ACD38_39_8
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
4266..5015
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map; methionine aminopeptidase (EC:3.4.11.18)
no description (db=Gene3D db_id=G3DSA:3.90.230.10 from=1 to=244 evalue=2.8e-61 interpro_id=IPR000994 interpro_description=Peptidase M24, structural domain GO=Biological Process: cellular process (GO:0009987))
Creatinase/aminopeptidase (db=superfamily db_id=SSF55920 from=2 to=246 evalue=4.6e-60 interpro_id=IPR000994 interpro_description=Peptidase M24, structural domain GO=Biological Process: cellular process (GO:0009987))
met_pdase_I: methionine aminopeptidase, t (db=HMMTigr db_id=TIGR00500 from=1 to=246 evalue=1.5e-58 interpro_id=IPR002467 interpro_description=Peptidase M24A, methionine aminopeptidase, subfamily 1 GO=Molecular Function: aminopeptidase activity (GO:0004177), Biological Process: proteolysis (GO:0006508), Molecular Function: metalloexopeptidase activity (GO:0008235))
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ACD38_39_9
uncultured bacterium, Bacteria
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Not on your lists |
5076..5345
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translation initiation factor 1 (bif-1)
infA: translation initiation factor IF-1 (db=HMMTigr db_id=TIGR00008 from=12 to=88 evalue=4.1e-28 interpro_id=IPR004368 interpro_description=Translation initiation factor IF-1 GO=Molecular Function: translation initiation factor activity (GO:0003743), Biological Process: translational initiation (GO:0006413))
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=9 to=88 evalue=3.6e-20 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=9 to=88 evalue=6.4e-18 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold)
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ACD38_39_10
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
5520..5933
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rpsM; 30S ribosomal protein S13
seg (db=Seg db_id=seg from=122 to=137)
coiled-coil (db=Coil db_id=coil from=46 to=67 evalue=NA)
bact_S13: 30S ribosomal protein S13 (db=HMMTigr db_id=TIGR03631 from=3 to=114 evalue=6.8e-66 interpro_id=IPR019980 interpro_description=Ribosomal protein S13, bacterial-type GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD38_39_11
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria
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Not on your lists |
5930..6325
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rpsK; 30S ribosomal protein S11
seg (db=Seg db_id=seg from=2 to=19)
RIBOSOMAL_S11 (db=PatternScan db_id=PS00054 from=99 to=121 evalue=0.0 interpro_id=IPR018102 interpro_description=Ribosomal S11, conserved site)
Ribosomal protein, S11p/S11a/S14e/organellar S11 types (db=HMMPIR db_id=PIRSF002131 from=1 to=131 evalue=5.8e-66 interpro_id=IPR001971 interpro_description=Ribosomal protein S11 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD38_39_12
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
6325..6927
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rpsD; 30S ribosomal protein S4
RIBOSOMAL_S4 (db=PatternScan db_id=PS00632 from=92 to=116 evalue=0.0 interpro_id=IPR018079 interpro_description=Ribosomal protein S4, conserved site GO=Cellular Component: intracellular (GO:0005622), Molecular Function: rRNA binding (GO:0019843))
rpsD_bact: ribosomal protein S4 (db=HMMTigr db_id=TIGR01017 from=3 to=200 evalue=1.3e-92 interpro_id=IPR005709 interpro_description=Ribosomal protein S4, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
Alpha-L RNA-binding motif (db=superfamily db_id=SSF55174 from=2 to=200 evalue=3.8e-58)
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ACD38_39_13
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
6946..7851
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DNA-directed RNA polymerase alpha subunit
rpoA: DNA-directed RNA polymerase, alpha sub (db=HMMTigr db_id=TIGR02027 from=13 to=301 evalue=7.6e-116 interpro_id=IPR011773 interpro_description=DNA-directed RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351))
no description (db=HMMSmart db_id=SM00662 from=13 to=219 evalue=2.0e-65 interpro_id=IPR011263 interpro_description=DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350))
Insert subdomain of RNA polymerase alpha subunit (db=superfamily db_id=SSF56553 from=43 to=163 evalue=1.5e-38 interpro_id=IPR011262 interpro_description=DNA-directed RNA polymerase, insert domain GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350), Molecular Function: protein dimerization activity (GO:0046983))
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ACD38_39_14
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria
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Not on your lists |
7841..8350
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rplQ; 50S ribosomal protein L17
RIBOSOMAL PROTEIN L17 (db=HMMPanther db_id=PTHR14413 from=1 to=141 evalue=2.1e-26 interpro_id=IPR000456 interpro_description=Ribosomal protein L17 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
RIBOSOMAL PROTEIN L17 (db=HMMPanther db_id=PTHR14413:SF3 from=1 to=141 evalue=2.1e-26)
no description (db=Gene3D db_id=G3DSA:3.90.1030.10 from=1 to=115 evalue=1.5e-23 interpro_id=IPR000456 interpro_description=Ribosomal protein L17 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD38_39_15
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
8382..8777
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50S ribosomal protein L13
seg (db=Seg db_id=seg from=60 to=73)
RIBOSOMAL_L13 (db=PatternScan db_id=PS00783 from=105 to=127 evalue=0.0 interpro_id=IPR005822 interpro_description=Ribosomal protein L13 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
rplM_bact: ribosomal protein L13 (db=HMMTigr db_id=TIGR01066 from=3 to=131 evalue=2.4e-56 interpro_id=IPR005823 interpro_description=Ribosomal protein L13, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD38_39_16
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria
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Not on your lists |
8774..9169
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30S ribosomal protein S9
RIBOSOMAL_S9 (db=PatternScan db_id=PS00360 from=69 to=87 evalue=0.0 interpro_id=IPR020574 interpro_description=Ribosomal protein S9, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_S9 (db=HMMPfam db_id=PF00380 from=10 to=131 evalue=2.9e-37 interpro_id=IPR000754 interpro_description=Ribosomal protein S9 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal protein S5 domain 2-like (db=superfamily db_id=SSF54211 from=4 to=131 evalue=1.1e-35 interpro_id=IPR020568 interpro_description=Ribosomal protein S5 domain 2-type fold)
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ACD38_39_17
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria
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Not on your lists |
9250..10644
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Phosphomannomutase
Phosphomannomutase
Phosphomannomutase n=1 Tax=Thermanaerovibrio acidaminovorans DSM 6589 RepID=D1B8V1_THEAS (db=UNIREF evalue=2.0e-94 bit_score=350.0 identity=42.67 coverage=98.7096774193548)
seg (db=Seg db_id=seg from=309 to=323)
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ACD38_39_18
uncultured bacterium, Bacteria
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Not on your lists |
comp(10615..10845)
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seg (db=Seg db_id=seg from=26 to=36)
Uncharacterized protein {ECO:0000313|EMBL:EKD85216.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD38_39_19
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
10846..11961
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metK; S-adenosylmethionine synthetase
metK; S-adenosylmethionine synthetase
S-adenosylmethionine synthetase n=1 Tax=Bacillus tusciae DSM 2912 RepID=D5WVT8_9BACL (db=UNIREF evalue=1.0e-101 bit_score=374.0 identity=49.6 coverage=96.505376344086)
ADOMET_SYNTHASE_2 (db=PatternScan db_id=PS00377 from=258 to=266 evalue=0.0 interpro_id=IPR022631 interpro_description=S-adenosylmethionine synthetase, conserved site)
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ACD38_39_20
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(12032..12301)
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acylphosphatase
Acylphosphatase (Putative) n=1 Tax=Pedobacter sp. BAL39 RepID=A6EBK6_9SPHI (db=UNIREF evalue=3.0e-19 bit_score=97.4 identity=45.88 coverage=93.3333333333333)
ACYLPHOSPHATASE_1 (db=PatternScan db_id=PS00150 from=9 to=19 evalue=0.0 interpro_id=IPR017968 interpro_description=Acylphosphatase, conserved site)
ACYLPHOSPHATASE_2 (db=PatternScan db_id=PS00151 from=33 to=49 evalue=0.0 interpro_id=IPR017968 interpro_description=Acylphosphatase, conserved site)
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ACD38_39_21
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(12402..13187)
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Putative endonuclease/exonuclease/phosphatase family protein n=1 Tax=Legionella drancourtii LLAP12 RepID=C6MZX4_9GAMM (db=UNIREF evalue=7.0e-29 bit_score=130.0 identity=33.46 coverage=91.9847328244275)
endonuclease/exonuclease/phosphatase (db=KEGG evalue=2.0e-18 bit_score=95.9 identity=26.26 coverage=99.236641221374)
seg (db=Seg db_id=seg from=95 to=113)
DNase I-like (db=superfamily db_id=SSF56219 from=1 to=261 evalue=3.5e-25 interpro_id=IPR005135 interpro_description=Endonuclease/exonuclease/phosphatase)
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ACD38_39_22
GWC2_OP11_40_12, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
13565..14632
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recA; recA protein
recA; recA protein
Protein recA n=2 Tax=Bacillales RepID=D3E677_GEOS4 (db=UNIREF evalue=3.0e-104 bit_score=382.0 identity=65.84 coverage=89.8876404494382)
seg (db=Seg db_id=seg from=47 to=60)
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ACD38_39_23
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
14640..15302
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recX; hypothetical protein
seg (db=Seg db_id=seg from=168 to=181)
seg (db=Seg db_id=seg from=207 to=220)
coiled-coil (db=Coil db_id=coil from=159 to=180 evalue=NA)
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ACD38_39_24
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
15522..16880
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hypothetical protein
hypothetical protein
Putative uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SII2_9FIRM (db=UNIREF evalue=8.0e-96 bit_score=354.0 identity=44.98 coverage=91.832229580574)
seg (db=Seg db_id=seg from=93 to=124)
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ACD38_39_25
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(16881..18275)
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hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=32)
seg (db=Seg db_id=seg from=78 to=83)
seg (db=Seg db_id=seg from=185 to=198)
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ACD38_39_26
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
18330..18602
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histone family protein DNA-binding protein
HISTONE_LIKE (db=PatternScan db_id=PS00045 from=46 to=65 evalue=0.0 interpro_id=IPR020816 interpro_description=Histone-like DNA-binding protein, conserved site GO=Molecular Function: DNA binding (GO:0003677))
no description (db=HMMSmart db_id=SM00411 from=1 to=90 evalue=8.1e-34 interpro_id=IPR000119 interpro_description=Histone-like bacterial DNA-binding protein GO=Molecular Function: DNA binding (GO:0003677))
Bac_DNA_binding (db=HMMPfam db_id=PF00216 from=1 to=89 evalue=6.3e-33 interpro_id=IPR000119 interpro_description=Histone-like bacterial DNA-binding protein GO=Molecular Function: DNA binding (GO:0003677))
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ACD38_39_27
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(18595..19233)
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channel protein, hemolysin III family
seg (db=Seg db_id=seg from=160 to=172)
seg (db=Seg db_id=seg from=56 to=72)
seg (db=Seg db_id=seg from=20 to=36)
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ACD38_39_28
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
19289..20245
|
seg (db=Seg db_id=seg from=191 to=203)
Protein kinase-like (PK-like) (db=superfamily db_id=SSF56112 from=17 to=289 evalue=5.5e-09 interpro_id=IPR011009 interpro_description=Protein kinase-like domain)
Uncharacterized protein {ECO:0000313|EMBL:KKR17096.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
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ACD38_39_29
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(20253..21470)
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glycosyl transferase family protein
seg (db=Seg db_id=seg from=363 to=382)
seg (db=Seg db_id=seg from=209 to=220)
seg (db=Seg db_id=seg from=101 to=119)
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ACD38_39_30
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria
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Not on your lists |
comp(21448..22659)
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hypothetical protein
seg (db=Seg db_id=seg from=378 to=394)
seg (db=Seg db_id=seg from=342 to=352)
seg (db=Seg db_id=seg from=328 to=339)
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