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QH_2_Parcubacteria_50_6

In projects: QH_2  |  all_cpr_genomes  |  ggK_CPR

Consensus taxonomy: Parcubacteria  →  Bacteria

Taxonomy override: Parcubacteria

Metagenomic Context

Parent: QH_2_UNK

Properties

Avg. coverage: 6.26 Longest contig: 5.87 Kbp Bin length: 407.06 Kbp GC content: 49.70 %
Contigs count: 235 Features count: 586 rRNAs count: 0 tRNAs count: 8

Genome completeness

partial RP 29 / 55 MC: 6 BSCG 30 / 51 MC: 8 ASCG 7 / 38 MC: 3
Displaying items 151-200 of 235 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_2_scaffold_20423
Species: Parcubacteria bacterium GW2011_GWA2_40_143 (50%)
2 1138 bp 45.61 4.75 100.18
qh_2_scaffold_23253
Species: GWA2_OD1_52_12 (50%)
2 1035 bp 50.72 5.80 60.87
qh_2_scaffold_11505
Species: RIFOXYC2_FULL_OD1_Campbellbacteria_35_25_curated (50%)
2 1700 bp 49.82 6.18 89.29
qh_2_scaffold_18564
Species: GWD2_OD1_38_42 (50%)
2 1218 bp 56.49 5.01 89.90
qh_2_scaffold_21608
Species: R_RIF_OD1_11_44_35 (50%)
2 1092 bp 45.97 4.58 87.64
qh_2_scaffold_11746
Species: R_RIF_OD1_09_43_27 (50%)
2 1675 bp 49.01 6.75 95.28
qh_2_scaffold_21150
Species: RLO_OD1_60_15 (50%)
2 1110 bp 51.71 8.38 76.49
qh_2_scaffold_8595
Species: R_OD1_Giovannonibacteria_43_16 (50%)
2 2048 bp 43.85 6.30 85.40
qh_2_scaffold_13977
Species: GWA2_OD1_43_11 (50%)
2 1491 bp 53.66 4.09 74.04
qh_2_scaffold_41567
Species: GWE2_OD1_38_254 (50%)
2 1388 bp 38.69 4.68 75.22
qh_2_scaffold_22819
Species: R_OD1_Campbellbacteria_35_12 (50%)
2 1050 bp 51.43 5.24 99.14
qh_2_scaffold_20937
Species: GWA2_OD1_52_12 (50%)
2 1118 bp 46.33 7.42 86.14
qh_2_scaffold_12690
Species: R_OD1_Kaiserbacteria_49_11 (50%)
2 1592 bp 55.72 6.66 91.96
qh_2_scaffold_14852
Species: R_RIF_OD1_11_46_13 (50%)
2 1427 bp 44.08 8.48 84.72
qh_2_scaffold_18828
Species: R_RIF_OD1_10_43_37 (50%)
2 1206 bp 50.83 5.72 92.29
qh_2_scaffold_12001
Species: GWA2_OD1_47_21_part (50%)
2 1652 bp 53.09 4.84 99.52
qh_2_scaffold_14228
Species: R_OD1_Kaiserbacteria_49_16 (50%)
2 1471 bp 52.48 6.25 96.87
qh_2_scaffold_18084
Species: CG_Nomura_03 (50%)
2 1242 bp 47.75 7.00 82.61
qh_2_scaffold_22377
Species: GWD2_OD1_42_14 (50%)
2 1065 bp 52.96 6.95 98.31
qh_2_scaffold_9732
Species: GWD1_OD1_35_49 (50%)
2 1890 bp 44.50 8.04 67.30
qh_2_scaffold_20958
Species: GWA1_OD1_47_8 (50%)
2 1117 bp 44.49 5.91 93.46
qh_2_scaffold_18382
Species: R_OD1_Campbellbacteria_35_11 (50%)
2 1228 bp 41.78 5.37 79.15
qh_2_scaffold_21425
Species: RLO_RIF_OD1_11_43_20 (50%)
2 1098 bp 50.46 6.28 91.26
qh_2_scaffold_23082
Species: GWA1_OD1_40_21 (50%)
2 1665 bp 51.17 5.17 85.95
qh_2_scaffold_19037
Species: R_RIF_OD1_11_46_22b (50%)
2 1197 bp 42.44 6.02 71.68
qh_2_scaffold_16193
Species: Parcubacteria bacterium RAAC4_OD1_1 (50%)
2 1344 bp 41.07 4.91 91.52
qh_2_scaffold_19272
Species: R_OD1_45_48 (50%)
2 1186 bp 50.67 5.65 69.81
qh_2_scaffold_23320
Species: RHI_RIF_OD1_10_43_12b (50%)
2 1762 bp 50.79 5.39 76.11
qh_2_scaffold_18637
Species: RIFOXYD2_FULL_OD1_Magasanikbacteria_41_14_curated (50%)
2 1215 bp 45.84 5.19 57.53
qh_2_scaffold_33421
Species: R_OD1_Kaiserbacteria_54_22 (50%)
2 1419 bp 47.71 5.99 101.48
qh_2_scaffold_8844
Species: RIFOXYC2_FULL_OD1_Magasanikbacteria_39_8_curated (50%)
2 2013 bp 51.37 5.46 95.83
qh_2_scaffold_36112
Species: Parcubacteria bacterium GW2011_GWA2_40_37 (50%)
2 1326 bp 45.78 5.13 59.28
qh_2_scaffold_10434
Species: Parcubacteria bacterium GW2011_GWA1_56_13 (50%)
2 1814 bp 52.09 6.84 78.39
qh_2_scaffold_13811
Species: R_OD1_Kaiserbacteria_51_21 (50%)
2 1505 bp 53.42 5.51 82.33
qh_2_scaffold_12279
Species: GWA2_OD1_58_9 (50%)
2 1626 bp 42.07 4.98 64.21
qh_2_scaffold_19292
Species: GWF2_OD1_38_76 (50%)
2 1185 bp 45.32 5.40 86.84
qh_2_scaffold_13201
Species: Parcubacteria bacterium GW2011_GWB1_41_5 (50%)
2 1551 bp 56.61 4.45 94.39
qh_2_scaffold_20513
Species: R_RIF_OD1_09_47_33b (50%)
2 1135 bp 52.16 7.93 53.92
qh_2_scaffold_6600
Species: R_RIF_OD1_10_39_10 (50%)
2 2412 bp 51.70 5.39 80.97
qh_2_scaffold_16227
Species: GWA1_OD1_54_10 (50%)
2 1342 bp 50.37 6.26 100.15
qh_2_scaffold_21001
Species: GWD2_OD1_42_14 (50%)
2 1116 bp 46.06 6.09 89.52
qh_2_scaffold_14683
Species: Parcubacteria bacterium GW2011_GWC2_42_13 (50%)
2 1438 bp 56.19 4.66 94.51
qh_2_scaffold_39070
Species: R_RIF_OD1_11_45_35 (100%)
1 1352 bp 47.49 7.03 35.06
qh_2_scaffold_24983
Species: GWA1_OD1_50_28_partial (100%)
1 1893 bp 53.99 7.13 93.34
qh_2_scaffold_20775
Species: RIFOXYD1_FULL_OD1_48_21_curated (100%)
1 1125 bp 42.40 6.04 23.73
qh_2_scaffold_22453
Species: RIFOXYC2_FULL_OD1_Campbellbacteria_35_25_curated (100%)
1 1063 bp 45.06 6.59 89.18
qh_2_scaffold_22223
Species: RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated (100%)
1 1070 bp 57.20 5.61 99.81
qh_2_scaffold_25025
Species: RIFOXYD1_FULL_OD1_44_32_curated (100%)
1 1787 bp 49.08 5.37 53.05
qh_2_scaffold_18458
Species: GWA2_OD1_45_21 (100%)
1 1224 bp 51.55 8.01 96.32
qh_2_scaffold_21270
Species: GWA1_OD1_46_11_plus_minus (100%)
1 1105 bp 55.48 6.24 80.36
Displaying items 151-200 of 235 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.