ggKbase | organisms

QH_2_Parcubacteria_50_6

In projects: QH_2 | all_cpr_genomes | ggK_CPR

Consensus taxonomy: Parcubacteria → Bacteria

Taxonomy override: Parcubacteria

Metagenomic Context

Parent: QH_2_UNK

Properties

Avg. coverage: 6.26 Longest contig: 5.87 Kbp Bin length: 407.06 Kbp GC content: 49.70 %

Contigs count: 235 Features count: 586 rRNAs count: 0 tRNAs count: 8

Genome completeness

partial RP 29 / 55 MC: 6 BSCG 30 / 51 MC: 8 ASCG 7 / 38 MC: 3

Displaying items 151-200 of 235 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
qh_2_scaffold_20423 Species: Parcubacteria bacterium GW2011_GWA2_40_143 (50%)	2	1138 bp	45.61	4.75	100.18
qh_2_scaffold_23253 Species: GWA2_OD1_52_12 (50%)	2	1035 bp	50.72	5.80	60.87
qh_2_scaffold_11505 Species: RIFOXYC2_FULL_OD1_Campbellbacteria_35_25_curated (50%)	2	1700 bp	49.82	6.18	89.29
qh_2_scaffold_18564 Species: GWD2_OD1_38_42 (50%)	2	1218 bp	56.49	5.01	89.90
qh_2_scaffold_21608 Species: R_RIF_OD1_11_44_35 (50%)	2	1092 bp	45.97	4.58	87.64
qh_2_scaffold_11746 Species: R_RIF_OD1_09_43_27 (50%)	2	1675 bp	49.01	6.75	95.28
qh_2_scaffold_21150 Species: RLO_OD1_60_15 (50%)	2	1110 bp	51.71	8.38	76.49
qh_2_scaffold_8595 Species: R_OD1_Giovannonibacteria_43_16 (50%)	2	2048 bp	43.85	6.30	85.40
qh_2_scaffold_13977 Species: GWA2_OD1_43_11 (50%)	2	1491 bp	53.66	4.09	74.04
qh_2_scaffold_41567 Species: GWE2_OD1_38_254 (50%)	2	1388 bp	38.69	4.68	75.22
qh_2_scaffold_22819 Species: R_OD1_Campbellbacteria_35_12 (50%)	2	1050 bp	51.43	5.24	99.14
qh_2_scaffold_20937 Species: GWA2_OD1_52_12 (50%)	2	1118 bp	46.33	7.42	86.14
qh_2_scaffold_12690 Species: R_OD1_Kaiserbacteria_49_11 (50%)	2	1592 bp	55.72	6.66	91.96
qh_2_scaffold_14852 Species: R_RIF_OD1_11_46_13 (50%)	2	1427 bp	44.08	8.48	84.72
qh_2_scaffold_18828 Species: R_RIF_OD1_10_43_37 (50%)	2	1206 bp	50.83	5.72	92.29
qh_2_scaffold_12001 Species: GWA2_OD1_47_21_part (50%)	2	1652 bp	53.09	4.84	99.52
qh_2_scaffold_14228 Species: R_OD1_Kaiserbacteria_49_16 (50%)	2	1471 bp	52.48	6.25	96.87
qh_2_scaffold_18084 Species: CG_Nomura_03 (50%)	2	1242 bp	47.75	7.00	82.61
qh_2_scaffold_22377 Species: GWD2_OD1_42_14 (50%)	2	1065 bp	52.96	6.95	98.31
qh_2_scaffold_9732 Species: GWD1_OD1_35_49 (50%)	2	1890 bp	44.50	8.04	67.30
qh_2_scaffold_20958 Species: GWA1_OD1_47_8 (50%)	2	1117 bp	44.49	5.91	93.46
qh_2_scaffold_18382 Species: R_OD1_Campbellbacteria_35_11 (50%)	2	1228 bp	41.78	5.37	79.15
qh_2_scaffold_21425 Species: RLO_RIF_OD1_11_43_20 (50%)	2	1098 bp	50.46	6.28	91.26
qh_2_scaffold_23082 Species: GWA1_OD1_40_21 (50%)	2	1665 bp	51.17	5.17	85.95
qh_2_scaffold_19037 Species: R_RIF_OD1_11_46_22b (50%)	2	1197 bp	42.44	6.02	71.68
qh_2_scaffold_16193 Species: Parcubacteria bacterium RAAC4_OD1_1 (50%)	2	1344 bp	41.07	4.91	91.52
qh_2_scaffold_19272 Species: R_OD1_45_48 (50%)	2	1186 bp	50.67	5.65	69.81
qh_2_scaffold_23320 Species: RHI_RIF_OD1_10_43_12b (50%)	2	1762 bp	50.79	5.39	76.11
qh_2_scaffold_18637 Species: RIFOXYD2_FULL_OD1_Magasanikbacteria_41_14_curated (50%)	2	1215 bp	45.84	5.19	57.53
qh_2_scaffold_33421 Species: R_OD1_Kaiserbacteria_54_22 (50%)	2	1419 bp	47.71	5.99	101.48
qh_2_scaffold_8844 Species: RIFOXYC2_FULL_OD1_Magasanikbacteria_39_8_curated (50%)	2	2013 bp	51.37	5.46	95.83
qh_2_scaffold_36112 Species: Parcubacteria bacterium GW2011_GWA2_40_37 (50%)	2	1326 bp	45.78	5.13	59.28
qh_2_scaffold_10434 Species: Parcubacteria bacterium GW2011_GWA1_56_13 (50%)	2	1814 bp	52.09	6.84	78.39
qh_2_scaffold_13811 Species: R_OD1_Kaiserbacteria_51_21 (50%)	2	1505 bp	53.42	5.51	82.33
qh_2_scaffold_12279 Species: GWA2_OD1_58_9 (50%)	2	1626 bp	42.07	4.98	64.21
qh_2_scaffold_19292 Species: GWF2_OD1_38_76 (50%)	2	1185 bp	45.32	5.40	86.84
qh_2_scaffold_13201 Species: Parcubacteria bacterium GW2011_GWB1_41_5 (50%)	2	1551 bp	56.61	4.45	94.39
qh_2_scaffold_20513 Species: R_RIF_OD1_09_47_33b (50%)	2	1135 bp	52.16	7.93	53.92
qh_2_scaffold_6600 Species: R_RIF_OD1_10_39_10 (50%)	2	2412 bp	51.70	5.39	80.97
qh_2_scaffold_16227 Species: GWA1_OD1_54_10 (50%)	2	1342 bp	50.37	6.26	100.15
qh_2_scaffold_21001 Species: GWD2_OD1_42_14 (50%)	2	1116 bp	46.06	6.09	89.52
qh_2_scaffold_14683 Species: Parcubacteria bacterium GW2011_GWC2_42_13 (50%)	2	1438 bp	56.19	4.66	94.51
qh_2_scaffold_39070 Species: R_RIF_OD1_11_45_35 (100%)	1	1352 bp	47.49	7.03	35.06
qh_2_scaffold_24983 Species: GWA1_OD1_50_28_partial (100%)	1	1893 bp	53.99	7.13	93.34
qh_2_scaffold_20775 Species: RIFOXYD1_FULL_OD1_48_21_curated (100%)	1	1125 bp	42.40	6.04	23.73
qh_2_scaffold_22453 Species: RIFOXYC2_FULL_OD1_Campbellbacteria_35_25_curated (100%)	1	1063 bp	45.06	6.59	89.18
qh_2_scaffold_22223 Species: RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated (100%)	1	1070 bp	57.20	5.61	99.81
qh_2_scaffold_25025 Species: RIFOXYD1_FULL_OD1_44_32_curated (100%)	1	1787 bp	49.08	5.37	53.05
qh_2_scaffold_18458 Species: GWA2_OD1_45_21 (100%)	1	1224 bp	51.55	8.01	96.32
qh_2_scaffold_21270 Species: GWA1_OD1_46_11_plus_minus (100%)	1	1105 bp	55.48	6.24	80.36

Displaying items 151-200 of 235 in total

QH_2_Parcubacteria_50_6

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

QH_2_Parcubacteria_50_6

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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