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ACD3_5

Alias: ACD3_432.23498.69

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD3_5_1
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(161..340)
DNA (180bp) protein (60aa)
161..340 - (rbs_motif=TAA rbs_spacer=9bp)
hypothetical protein Tax=ACD3
ACD3_5_2
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(343..519)
DNA (177bp) protein (59aa)
DUF1508 (db=HMMPfam db_id=PF07411 from=11 to=56 evalue=2.3e-13 interpro_id=IPR010879 interpro_description=Protein of unknown function DUF1508)
DUF1508 Tax=ACD3
ACD3_5_3
ACD3, Gracilibacteria, Bacteria

Not on your lists

835..2187
DNA (1353bp) protein (451aa)
seg (db=Seg db_id=seg from=325 to=336)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=394 evalue=1.4e-14)
seg 325..336 Tax=ACD3
ACD3_5_4
ACD3, Gracilibacteria, Bacteria

Not on your lists

2189..2875
DNA (687bp) protein (229aa)
2189..2875 + (rbs_motif=TAA rbs_spacer=8bp)
hypothetical protein Tax=ACD3
ACD3_5_5
ACD3, Gracilibacteria, Bacteria

Not on your lists

3099..4346
DNA (1248bp) protein (416aa)
DEAD/DEAH box helicase
DEAD/DEAH box helicase
DEAD/DEAH box helicase domain protein n=1 Tax=Spirosoma linguale DSM 74 RepID=D2QGG1_SPILD (db=UNIREF evalue=8.0e-141 bit_score=503.0 identity=67.44 coverage=93.0288461538462)
seg (db=Seg db_id=seg from=170 to=184)
ACD3_5_6

Not on your lists

comp(4486..6453)
DNA (1968bp) protein (656aa)
Secreted peptidase n=1 Tax=Streptomyces albus J1074 RepID=D6BBY7_9ACTO (db=UNIREF evalue=2.0e-10 bit_score=71.6 identity=32.79 coverage=17.2256097560976)
peptidase M23B (EC:3.4.24.75) (db=KEGG evalue=4.0e-09 bit_score=67.0 identity=30.53 coverage=13.719512195122)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
seg (db=Seg db_id=seg from=5 to=14)
ACD3_5_7
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(6593..7534)
DNA (942bp) protein (314aa)
Sodium/proton antiporter
transmembrane_regions (db=TMHMM db_id=tmhmm from=29 to=51)
seg (db=Seg db_id=seg from=33 to=45)
Thioredoxin-like (db=superfamily db_id=SSF52833 from=122 to=310 evalue=1.0e-31 interpro_id=IPR012336 interpro_description=Thioredoxin-like fold)
ACD3_5_8
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(7734..10163)
DNA (2430bp) protein (810aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
seg (db=Seg db_id=seg from=15 to=32)
seg (db=Seg db_id=seg from=415 to=423)
seg (db=Seg db_id=seg from=198 to=210)
ACD3_5_9
unknown

Not on your lists

comp(10339..11199)
DNA (861bp) protein (287aa)
DSBA oxidoreductase n=1 Tax=Endoriftia persephone 'Hot96_1+Hot96_2' RepID=UPI0001699D3D (db=UNIREF evalue=1.0e-09 bit_score=67.4 identity=26.47 coverage=46.3414634146341)
DsbA oxidoreductase (db=KEGG evalue=6.0e-09 bit_score=65.1 identity=31.4 coverage=38.6759581881533)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=249 to=262)
ACD3_5_10
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(11226..11591)
DNA (366bp) protein (122aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
transmembrane_regions 5..24 Tax=ACD3
ACD3_5_11
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(11872..12087)
DNA (216bp) protein (72aa)
11872..12087 - (rbs_motif=TAA rbs_spacer=7bp)
hypothetical protein Tax=ACD3
ACD3_5_12
unknown

Not on your lists

comp(12180..12674)
DNA (495bp) protein (165aa)
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TJE8_9PROT (db=UNIREF evalue=2.0e-46 bit_score=187.0 identity=56.21 coverage=92.1212121212121)
hypothetical protein
Predicted S-adenosyl-L-methionine dependent 3-demethylubiquinone-9 3-methyltransferase (db=HMMPIR db_id=PIRSF021700 from=2 to=162 evalue=3.3e-59 interpro_id=IPR009725 interpro_description=3-demethylubiquinone-9 3-O-methyltransferase)
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (db=superfamily db_id=SSF54593 from=8 to=161 evalue=2.1e-49)
ACD3_5_13
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(12832..14148)
DNA (1317bp) protein (439aa)
Seryl-tRNA synthetase n=1 Tax=Bacillus tusciae DSM 2912 RepID=D5WTU4_9BACL (db=UNIREF evalue=2.0e-89 bit_score=333.0 identity=39.95 coverage=96.3553530751709)
seryl-tRNA synthetase (EC:6.1.1.11)
seryl-tRNA synthetase (EC:6.1.1.11)
Serine-tRNA ligase (db=HMMPIR db_id=PIRSF001529 from=1 to=438 evalue=1.8e-126 interpro_id=IPR002317 interpro_description=Seryl-tRNA synthetase, class IIa GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: serine-tRNA ligase activity (GO:0004828), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: seryl-tRNA aminoacylation (GO:0006434))
ACD3_5_14
ACD3, Gracilibacteria, Bacteria

Not on your lists

14674..16425
DNA (1752bp) protein (584aa)
Threonyl-tRNA synthetase n=1 Tax=Clostridium beijerinckii NCIMB 8052 RepID=A6LYA6_CLOB8 (db=UNIREF evalue=2.0e-146 bit_score=523.0 identity=46.98 coverage=97.0890410958904)
thrS; threonyl-tRNA synthetase
thrS; threonyl-tRNA synthetase
seg (db=Seg db_id=seg from=47 to=71)
ACD3_5_15
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(16652..17749)
DNA (1098bp) protein (366aa)
16652..17749 - (rbs_motif=TTAA rbs_spacer=12bp)
hypothetical protein Tax=ACD3
ACD3_5_16
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(17951..18718)
DNA (768bp) protein (256aa)
coiled-coil (db=Coil db_id=coil from=81 to=102 evalue=NA)
TrmB (db=HMMPfam db_id=PF01978 from=10 to=67 evalue=1.3e-05 interpro_id=IPR002831 interpro_description=Transcription regulator TrmB, N-terminal)
coiled-coil 81..102 Tax=ACD3
ACD3_5_17

Not on your lists

18854..20491
DNA (1638bp) protein (546aa)
seg (db=Seg db_id=seg from=95 to=110)
seg (db=Seg db_id=seg from=137 to=148)
Uncharacterized protein {ECO:0000313|EMBL:EKE27718.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ACD3_5_18
ACD3, Gracilibacteria, Bacteria

Not on your lists

22218..23561
DNA (1344bp) protein (448aa)
seg (db=Seg db_id=seg from=215 to=226)
seg 215..226 Tax=ACD3
Displaying 18 items

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