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ACD3_17

Alias: ACD3_145.34077.69

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD3_17_1
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(2..1267)
DNA (1266bp) protein (422aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=203 to=220)
transmembrane_regions (db=TMHMM db_id=tmhmm from=240 to=259)
transmembrane_regions 203..220 Tax=ACD3
ACD3_17_2
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(1276..1590)
DNA (315bp) protein (105aa)
seg (db=Seg db_id=seg from=90 to=100)
seg (db=Seg db_id=seg from=45 to=56)
seg 45..56 Tax=ACD3
ACD3_17_3
ACD3, Gracilibacteria, Bacteria

Not on your lists

1807..2514
DNA (708bp) protein (236aa)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=17 evalue=6.0)
PROKAR_LIPOPROTEIN Tax=ACD3
ACD3_17_4
unknown

Not on your lists

2544..2936
DNA (393bp) protein (131aa)
Putative uncharacterized protein n=1 Tax=bacterium Ellin514 RepID=B9XQC7_9BACT (db=UNIREF evalue=7.0e-25 bit_score=115.0 identity=49.54 coverage=82.4427480916031)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=45 to=64)
DUF1801 (db=HMMPfam db_id=PF08818 from=23 to=116 evalue=1.2e-16 interpro_id=IPR014922 interpro_description=Protein of unknown function DUF1801)
ACD3_17_5
ACD3, Gracilibacteria, Bacteria

Not on your lists

4293..4544
DNA (252bp) protein (84aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=48 to=70)
seg (db=Seg db_id=seg from=33 to=46)
transmembrane_regions 48..70 Tax=ACD3
ACD3_17_6
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(4773..5198)
DNA (426bp) protein (142aa)
seg (db=Seg db_id=seg from=118 to=132)
seg 118..132 Tax=ACD3
ACD3_17_7
ACD3, Gracilibacteria, Bacteria

Not on your lists

5263..5448
DNA (186bp) protein (62aa)
5263..5448 + (rbs_motif=TAA rbs_spacer=10bp)
hypothetical protein Tax=ACD3
ACD3_17_8
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(5449..6600)
DNA (1152bp) protein (384aa)
purine or other phosphorylase family 1
Purine and uridine phosphorylases (db=superfamily db_id=SSF53167 from=90 to=357 evalue=8.9e-55)
no description (db=Gene3D db_id=G3DSA:3.40.50.1580 from=98 to=379 evalue=1.2e-51)
PNP_UDP_1 (db=HMMPfam db_id=PF01048 from=175 to=354 evalue=1.2e-09 interpro_id=IPR000845 interpro_description=Nucleoside phosphorylase GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: nucleoside metabolic process (GO:0009116))
ACD3_17_9

Not on your lists

comp(6720..7232)
DNA (513bp) protein (171aa)
seg (db=Seg db_id=seg from=82 to=93)
transmembrane_regions (db=TMHMM db_id=tmhmm from=129 to=151)
transmembrane_regions (db=TMHMM db_id=tmhmm from=82 to=99)
transmembrane_regions (db=TMHMM db_id=tmhmm from=56 to=75)
ACD3_17_10
ACD3, Gracilibacteria, Bacteria

Not on your lists

7398..9560
DNA (2163bp) protein (721aa)
ftsK; cell division protein ftsK
ftsK; cell division protein ftsK
Cell division protein FtsK/SpoIIIE n=1 Tax=Ethanoligenens harbinense YUAN-3 RepID=D3NL18_9FIRM (db=UNIREF evalue=7.0e-114 bit_score=415.0 identity=46.06 coverage=66.0194174757282)
transmembrane_regions (db=TMHMM db_id=tmhmm from=52 to=74)
ACD3_17_11
ACD3, Gracilibacteria, Bacteria

Not on your lists

9587..9946
DNA (360bp) protein (120aa)
Anti-sigma factor antagonist SpoIIaa (db=superfamily db_id=SSF52091 from=1 to=106 evalue=1.2e-11 interpro_id=IPR002645 interpro_description=Sulphate transporter/antisigma-factor antagonist STAS)
no description (db=Gene3D db_id=G3DSA:3.30.750.24 from=6 to=106 evalue=8.3e-10 interpro_id=IPR002645 interpro_description=Sulphate transporter/antisigma-factor antagonist STAS)
STAS (db=HMMPfam db_id=PF01740 from=25 to=104 evalue=1.9e-06 interpro_id=IPR002645 interpro_description=Sulphate transporter/antisigma-factor antagonist STAS)
STAS (db=ProfileScan db_id=PS50801 from=15 to=110 evalue=10.012 interpro_id=IPR002645 interpro_description=Sulphate transporter/antisigma-factor antagonist STAS)
ACD3_17_12
ACD3, Gracilibacteria, Bacteria

Not on your lists

9931..10473
DNA (543bp) protein (181aa)
9931..10473 + (rbs_motif=TTAA rbs_spacer=10bp)
hypothetical protein Tax=ACD3
ACD3_17_13
ACD3, Gracilibacteria, Bacteria

Not on your lists

10639..12096
DNA (1458bp) protein (486aa)
cell division protein FtsA
coiled-coil (db=Coil db_id=coil from=127 to=148 evalue=NA)
ftsA: cell division protein FtsA (db=HMMTigr db_id=TIGR01174 from=82 to=453 evalue=4.1e-73 interpro_id=IPR020823 interpro_description=Cell division protein family FtsA GO=Biological Process: cell cycle (GO:0007049))
Actin-like ATPase domain (db=superfamily db_id=SSF53067 from=80 to=270 evalue=1.8e-27)
ACD3_17_14

Not on your lists

12138..13334
DNA (1197bp) protein (399aa)
ftsZ; cell division protein FtsZ
ftsZ; cell division protein FtsZ
Cell division protein ftsZ n=1 Tax=Bacillus clausii KSM-K16 RepID=Q5WFH2_BACSK (db=UNIREF evalue=1.0e-97 bit_score=360.0 identity=55.46 coverage=89.9749373433584)
seg (db=Seg db_id=seg from=103 to=112)
ACD3_17_15
ACD3, Gracilibacteria, Bacteria

Not on your lists

13555..15018
DNA (1464bp) protein (488aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=261 to=280)
seg (db=Seg db_id=seg from=50 to=63)
seg (db=Seg db_id=seg from=114 to=127)
transmembrane_regions 261..280 Tax=ACD3
ACD3_17_16
ACD3, Gracilibacteria, Bacteria

Not on your lists

15021..16229
DNA (1209bp) protein (403aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=32)
seg (db=Seg db_id=seg from=249 to=266)
transmembrane_regions 13..32 Tax=ACD3
ACD3_17_17
ACD3, Gracilibacteria, Bacteria

Not on your lists

16229..17482
DNA (1254bp) protein (418aa)
Type IV-A pilus assembly ATPase PilB n=1 Tax=Thermodesulfovibrio yellowstonii DSM 11347 RepID=B5YJV4_THEYD (db=UNIREF evalue=3.0e-91 bit_score=338.0 identity=45.15 coverage=89.2344497607656)
hypothetical protein
hypothetical protein
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=4 to=414 evalue=1.5e-80)
ACD3_17_18
unknown

Not on your lists

17500..18648
DNA (1149bp) protein (383aa)
Genome sequencing data, contig C240 n=1 Tax=Microcystis aeruginosa PCC 7806 RepID=Q32QA7_MICAE (db=UNIREF evalue=2.0e-54 bit_score=217.0 identity=33.53 coverage=88.7728459530026)
Type II secretion system protein
seg (db=Seg db_id=seg from=200 to=209)
transmembrane_regions (db=TMHMM db_id=tmhmm from=351 to=373)
ACD3_17_19
ACD3, Gracilibacteria, Bacteria

Not on your lists

18735..19325
DNA (591bp) protein (197aa)
recR; recombination protein RecR
recR: recombination protein RecR (db=HMMTigr db_id=TIGR00615 from=1 to=196 evalue=1.1e-54 interpro_id=IPR000093 interpro_description=RecR protein GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310))
Recombination protein RecR (db=superfamily db_id=SSF111304 from=1 to=196 evalue=3.5e-52 interpro_id=IPR000093 interpro_description=RecR protein GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310))
RecR (db=HMMPfam db_id=PF02132 from=38 to=78 evalue=3.6e-11 interpro_id=IPR015967 interpro_description=Zinc finger C4-type, RecR GO=Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310))
ACD3_17_20
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(19369..20250)
DNA (882bp) protein (294aa)
seg (db=Seg db_id=seg from=154 to=166)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
transmembrane_regions 7..29 Tax=ACD3
ACD3_17_21
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(20256..20879)
DNA (624bp) protein (208aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
Pili subunits (db=superfamily db_id=SSF54523 from=10 to=121 evalue=1.6e-07)
IV_pilin_GFxxxE: prepilin-type N-term (db=HMMTigr db_id=TIGR02532 from=7 to=30 evalue=0.0012 interpro_id=IPR012902 interpro_description=Prepilin-type cleavage/methylation, N-terminal)
transmembrane_regions 15..37 Tax=ACD3
ACD3_17_22
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(20897..21541)
DNA (645bp) protein (215aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=17 to=39)
transmembrane_regions 17..39 Tax=ACD3
ACD3_17_23
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(21548..22111)
DNA (564bp) protein (188aa)
seg (db=Seg db_id=seg from=23 to=40)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
Pili subunits (db=superfamily db_id=SSF54523 from=21 to=72 evalue=2.1e-08)
IV_pilin_GFxxxE: prepilin-type N-term (db=HMMTigr db_id=TIGR02532 from=18 to=41 evalue=0.0056 interpro_id=IPR012902 interpro_description=Prepilin-type cleavage/methylation, N-terminal)
ACD3_17_24
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(22175..23269)
DNA (1095bp) protein (365aa)
Tfp pilus biogenesis protein PilC
seg (db=Seg db_id=seg from=233 to=244)
seg (db=Seg db_id=seg from=180 to=194)
seg (db=Seg db_id=seg from=130 to=143)
ACD3_17_25
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(23274..23840)
DNA (567bp) protein (189aa)
seg (db=Seg db_id=seg from=127 to=139)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
coiled-coil (db=Coil db_id=coil from=50 to=78 evalue=NA)
coiled-coil 50..78 Tax=ACD3
ACD3_17_26
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(23818..24402)
DNA (585bp) protein (195aa)
coiled-coil (db=Coil db_id=coil from=40 to=68 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=17 to=39)
coiled-coil 40..68 Tax=ACD3
ACD3_17_27

Not on your lists

24492..24893
DNA (402bp) protein (134aa)
putative ATPase or kinase
UPF0079 (db=HMMPfam db_id=PF02367 from=21 to=118 evalue=3.0e-22 interpro_id=IPR003442 interpro_description=Uncharacterised protein family UPF0079, ATPase bacteria)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=16 to=126 evalue=1.8e-20)
HI0065_YjeE: ATPase, YjeE family (db=HMMTigr db_id=TIGR00150 from=4 to=129 evalue=4.8e-17 interpro_id=IPR003442 interpro_description=Uncharacterised protein family UPF0079, ATPase bacteria)
ACD3_17_28
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(25040..26047)
DNA (1008bp) protein (336aa)
guanylate cyclase
seg (db=Seg db_id=seg from=234 to=248)
transmembrane_regions (db=TMHMM db_id=tmhmm from=144 to=163)
transmembrane_regions (db=TMHMM db_id=tmhmm from=38 to=60)
ACD3_17_29
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(26111..27076)
DNA (966bp) protein (322aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
seg (db=Seg db_id=seg from=125 to=140)
seg (db=Seg db_id=seg from=2 to=13)
transmembrane_regions (db=TMHMM db_id=tmhmm from=294 to=313)
ACD3_17_30
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(27077..27277)
DNA (201bp) protein (67aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=39)
seg (db=Seg db_id=seg from=12 to=35)
transmembrane_regions 5..39 Tax=ACD3
Displaying items 1-30 of 38 in total

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