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ACD3_24

Alias: ACD3_435.39150.63

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD3_24_1
ACD3, Gracilibacteria, Bacteria

Not on your lists

117..938
DNA (822bp) protein (274aa)
117..938 + (rbs_motif=TTAA rbs_spacer=5bp)
hypothetical protein Tax=ACD3
ACD3_24_2
ACD3, Gracilibacteria, Bacteria

Not on your lists

1082..3145
DNA (2064bp) protein (688aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
seg (db=Seg db_id=seg from=13 to=34)
seg (db=Seg db_id=seg from=530 to=551)
seg (db=Seg db_id=seg from=574 to=591)
ACD3_24_3
ACD3, Gracilibacteria, Bacteria

Not on your lists

3282..3848
DNA (567bp) protein (189aa)
3282..3848 + (rbs_motif=TTAA rbs_spacer=11bp)
hypothetical protein Tax=ACD3
ACD3_24_4
ACD3, Gracilibacteria, Bacteria

Not on your lists

3895..4089
DNA (195bp) protein (65aa)
3895..4089 + (rbs_motif=TTAA rbs_spacer=12bp)
hypothetical protein Tax=ACD3
ACD3_24_5

Not on your lists

4352..6439
DNA (2088bp) protein (696aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
seg (db=Seg db_id=seg from=11 to=32)
seg (db=Seg db_id=seg from=610 to=621)
seg (db=Seg db_id=seg from=490 to=503)
ACD3_24_6
unknown

Not on your lists

6669..8777
DNA (2109bp) protein (703aa)
Putative uncharacterized protein n=1 Tax=Arthrospira platensis NIES-39 RepID=D4ZPM0_SPIPL (db=UNIREF evalue=3.0e-42 bit_score=177.0 identity=26.09 coverage=60.0284495021337)
hypothetical protein
seg (db=Seg db_id=seg from=13 to=34)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
ACD3_24_7
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(9135..11024)
DNA (1890bp) protein (630aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=62 to=84)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
seg (db=Seg db_id=seg from=527 to=538)
ACD3_24_8
ACD3, Gracilibacteria, Bacteria

Not on your lists

11299..11910
DNA (612bp) protein (204aa)
hypothetical protein
hypothetical protein Tax=ACD3
hypothetical protein alias=ACD3_435.39150.63_8,ACD3_435.39150.63G0008,ACD3_C00024G00008 id=50060 tax=ACD3 species=Variovorax paradoxus genus=Variovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria organism_group=BD1-5 organism_desc=BD1-5
ACD3_24_9
ACD3, Gracilibacteria, Bacteria

Not on your lists

12849..13451
DNA (603bp) protein (201aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
seg (db=Seg db_id=seg from=46 to=65)
seg 46..65 Tax=ACD3
ACD3_24_10
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(13486..15099)
DNA (1614bp) protein (538aa)
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SAW4_LEPBA (db=UNIREF evalue=4.0e-116 bit_score=422.0 identity=41.71 coverage=99.2565055762082)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=224 to=356 evalue=4.7e-06)
ACD3_24_11
unknown

Not on your lists

15266..16162
DNA (897bp) protein (299aa)
cation efflux family protein
Pantothenate metabolism flavoprotein n=1 Tax=Campylobacter showae RM3277 RepID=C6RDA5_9PROT (db=UNIREF evalue=2.0e-32 bit_score=143.0 identity=34.06 coverage=91.304347826087)
transmembrane_regions (db=TMHMM db_id=tmhmm from=181 to=198)
coiled-coil (db=Coil db_id=coil from=250 to=278 evalue=NA)
ACD3_24_12
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(17358..17765)
DNA (408bp) protein (136aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
transmembrane_regions (db=TMHMM db_id=tmhmm from=44 to=66)
transmembrane_regions (db=TMHMM db_id=tmhmm from=73 to=95)
transmembrane_regions (db=TMHMM db_id=tmhmm from=100 to=117)
ACD3_24_13
unknown

Not on your lists

comp(17793..18791)
DNA (999bp) protein (333aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Streptomyces ambofaciens ATCC 23877 RepID=A0ADU6_STRAM (db=UNIREF evalue=9.0e-36 bit_score=154.0 identity=30.66 coverage=81.6816816816817)
seg (db=Seg db_id=seg from=169 to=181)
TIGR02452: conserved hypothetical protein T (db=HMMTigr db_id=TIGR02452 from=56 to=328 evalue=5.5e-46 interpro_id=IPR012664 interpro_description=Conserved hypothetical protein CHP02452)
ACD3_24_14
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(18835..19539)
DNA (705bp) protein (235aa)
NUDIX hydrolase
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=34)
Nudix (db=superfamily db_id=SSF55811 from=22 to=161 evalue=8.6e-20 interpro_id=IPR015797 interpro_description=NUDIX hydrolase domain-like GO=Molecular Function: hydrolase activity (GO:0016787))
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=162 to=234 evalue=1.5e-14)
ACD3_24_15
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(19600..20634)
DNA (1035bp) protein (345aa)
seg (db=Seg db_id=seg from=69 to=82)
ADP-ribosylglycohydrolase (db=superfamily db_id=SSF101478 from=3 to=343 evalue=2.0e-31 interpro_id=IPR005502 interpro_description=ADP-ribosylation/Crystallin J1)
ADP_ribosyl_GH (db=HMMPfam db_id=PF03747 from=13 to=313 evalue=4.0e-29 interpro_id=IPR005502 interpro_description=ADP-ribosylation/Crystallin J1)
seg 69..82 Tax=ACD3
ACD3_24_16
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(20646..21941)
DNA (1296bp) protein (432aa)
DUF1152 (db=HMMPfam db_id=PF06626 from=117 to=210 evalue=8.1e-12 interpro_id=IPR010581 interpro_description=Protein of unknown function DUF1152)
DUF1152 Tax=ACD3
ACD3_24_17
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(21943..22545)
DNA (603bp) protein (201aa)
MutT/nudix family protein
seg (db=Seg db_id=seg from=95 to=109)
no description (db=Gene3D db_id=G3DSA:3.90.79.10 from=8 to=172 evalue=4.8e-27 interpro_id=IPR000086 interpro_description=NUDIX hydrolase domain GO=Molecular Function: hydrolase activity (GO:0016787))
Nudix (db=superfamily db_id=SSF55811 from=12 to=194 evalue=1.3e-26 interpro_id=IPR015797 interpro_description=NUDIX hydrolase domain-like GO=Molecular Function: hydrolase activity (GO:0016787))
ACD3_24_18
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(22712..23062)
DNA (351bp) protein (117aa)
seg (db=Seg db_id=seg from=68 to=76)
seg 68..76 Tax=ACD3
ACD3_24_19
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(23124..23702)
DNA (579bp) protein (193aa)
nadD; nicotinic acid mononucleotide adenylyltransferase (EC:2.7.7.18); K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] (db=KEGG evalue=2.0e-11 bit_score=72.0 identity=28.93 coverage=96.3730569948187)
no description (db=Gene3D db_id=G3DSA:3.40.50.620 from=4 to=191 evalue=5.9e-20 interpro_id=IPR014729 interpro_description=Rossmann-like alpha/beta/alpha sandwich fold)
Nucleotidylyl transferase (db=superfamily db_id=SSF52374 from=1 to=191 evalue=3.1e-17)
CTP_transf_2 (db=HMMPfam db_id=PF01467 from=7 to=167 evalue=7.2e-05 interpro_id=IPR004820 interpro_description=Cytidylyltransferase GO=Biological Process: biosynthetic process (GO:0009058), Molecular Function: nucleotidyltransferase activity (GO:0016779))
ACD3_24_20
ACD3, Gracilibacteria, Bacteria

Not on your lists

23781..23960
DNA (180bp) protein (60aa)
23781..23960 + (rbs_motif=TTAA rbs_spacer=9bp)
hypothetical protein Tax=ACD3
ACD3_24_21
ACD3, Gracilibacteria, Bacteria

Not on your lists

24775..25194
DNA (420bp) protein (140aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=50 to=72)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
seg (db=Seg db_id=seg from=60 to=72)
seg 60..72 Tax=ACD3
ACD3_24_22
unknown

Not on your lists

comp(25290..26096)
DNA (807bp) protein (269aa)
Predicted kinase n=2 Tax=Bacteria RepID=Q6UCQ1_9PROT (db=UNIREF evalue=1.0e-14 bit_score=84.0 identity=32.22 coverage=64.3122676579926)
ppnk; Ppnk
seg (db=Seg db_id=seg from=222 to=238)
NAD kinase (db=superfamily db_id=SSF111331 from=51 to=250 evalue=2.0e-24 interpro_id=IPR016064 interpro_description=ATP-NAD kinase, PpnK-type GO=Molecular Function: NAD+ kinase activity (GO:0003951), Biological Process: metabolic process (GO:0008152))
ACD3_24_23
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(26697..28499)
DNA (1803bp) protein (601aa)
NAD+ synthetase
NAD+ synthetase
NH(3)-dependent NAD(+) synthetase n=1 Tax=Megamonas hypermegale ART12/1 RepID=D4KDI8_9FIRM (db=UNIREF evalue=5.0e-121 bit_score=438.0 identity=43.07 coverage=95.6738768718802)
seg (db=Seg db_id=seg from=316 to=326)
ACD3_24_24
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(28596..29738)
DNA (1143bp) protein (381aa)
coiled-coil (db=Coil db_id=coil from=178 to=203 evalue=NA)
coiled-coil 178..203 Tax=ACD3
ACD3_24_25
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(29873..30823)
DNA (951bp) protein (317aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=227 to=249)
transmembrane_regions (db=TMHMM db_id=tmhmm from=110 to=129)
transmembrane_regions (db=TMHMM db_id=tmhmm from=68 to=90)
seg (db=Seg db_id=seg from=209 to=219)
ACD3_24_26
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(30840..31283)
DNA (444bp) protein (148aa)
30840..31283 - (rbs_motif=TAA rbs_spacer=10bp)
hypothetical protein Tax=ACD3
ACD3_24_27
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(31511..32068)
DNA (558bp) protein (186aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=133 to=152)
transmembrane_regions (db=TMHMM db_id=tmhmm from=104 to=123)
transmembrane_regions (db=TMHMM db_id=tmhmm from=64 to=83)
transmembrane_regions (db=TMHMM db_id=tmhmm from=27 to=49)
ACD3_24_28
unknown

Not on your lists

comp(32266..33264)
DNA (999bp) protein (333aa)
Putative uncharacterized protein n=1 Tax=Bacteroides plebeius DSM 17135 RepID=B5D0H1_9BACE (db=UNIREF evalue=3.0e-10 bit_score=69.7 identity=30.21 coverage=65.1651651651652)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5); K00951 GTP pyrophosphokinase [EC:2.7.6.5] (db=KEGG evalue=9.0e-10 bit_score=68.2 identity=31.44 coverage=53.7537537537538)
seg (db=Seg db_id=seg from=39 to=54)
HD-domain/PDEase-like (db=superfamily db_id=SSF109604 from=148 to=325 evalue=5.8e-17)
ACD3_24_29
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(33455..33754)
DNA (300bp) protein (100aa)
33455..33754 - (rbs_motif=TTAA rbs_spacer=12bp)
hypothetical protein Tax=ACD3
ACD3_24_30
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(34236..35039)
DNA (804bp) protein (268aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
seg (db=Seg db_id=seg from=240 to=253)
seg (db=Seg db_id=seg from=15 to=29)
seg 15..29 Tax=ACD3
Displaying items 1-30 of 37 in total

View Taxonomy