Alias: ACD3_914.24984.76
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACD3_27_1
ACD3, Gracilibacteria, Bacteria
|
Not on your lists |
275..1495
|
seg (db=Seg db_id=seg from=72 to=87)
seg (db=Seg db_id=seg from=211 to=218)
seg 72..87 Tax=ACD3
|
|
ACD3_27_2
ACD3, Gracilibacteria, Bacteria
|
Not on your lists |
comp(1807..4497)
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=227 to=249)
transmembrane_regions (db=TMHMM db_id=tmhmm from=193 to=215)
seg (db=Seg db_id=seg from=856 to=871)
seg (db=Seg db_id=seg from=336 to=351)
|
|
ACD3_27_3
uncultured bacterium (gcode 4), Bacteria
|
Not on your lists |
4627..5136
|
hypothetical protein
seg (db=Seg db_id=seg from=91 to=102)
hypothetical protein alias=ACD3_C00027G00003,ACD3_914.24984.76G0003,ACD3_914.24984.76_3 id=50101 tax=ACD3 species=Methanosphaerula palustris genus=Methanosphaerula taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota organism_group=BD1-5 organism_desc=BD1-5
Uncharacterized protein {ECO:0000313|EMBL:EKE27299.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
|
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ACD3_27_4
ACD3, Gracilibacteria, Bacteria
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Not on your lists |
5242..5580
|
5242..5580 + (rbs_motif=TTAA rbs_spacer=11bp)
hypothetical protein Tax=ACD3
|
|
ACD3_27_5
ACD3, Gracilibacteria, Bacteria
|
Not on your lists |
comp(5637..6542)
|
alpha/beta-Hydrolases (db=superfamily db_id=SSF53474 from=41 to=291 evalue=2.8e-08)
alpha/beta-Hydrolases Tax=ACD3
|
|
ACD3_27_6
ACD3, Gracilibacteria, Bacteria
|
Not on your lists |
6699..7118
|
protein of unknown function DUF523
DUF523 (db=HMMPfam db_id=PF04463 from=2 to=134 evalue=1.5e-23 interpro_id=IPR007553 interpro_description=Protein of unknown function DUF523)
hypothetical protein alias=ACD3_C00027G00006,ACD3_914.24984.76G0006,ACD3_914.24984.76_6 id=50117 tax=ACD3 species=Caldanaerobacter subterraneus genus=Caldanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes organism_group=BD1-5 organism_desc=BD1-5
hypothetical protein Tax=ACD3
|
|
ACD3_27_7
unknown
|
Not on your lists |
7180..8469
|
CBS domain protein n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4RXH2_9FIRM (db=UNIREF evalue=1.0e-55 bit_score=220.0 identity=31.25 coverage=91.8604651162791)
integral membrane protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=95 to=113)
transmembrane_regions (db=TMHMM db_id=tmhmm from=126 to=148)
|
|
ACD3_27_8
ACD3, Gracilibacteria, Bacteria
|
Not on your lists |
8503..8925
|
8503..8925 + (rbs_motif=TTAA rbs_spacer=6bp)
hypothetical protein Tax=ACD3
|
|
ACD3_27_9
ACD3, Gracilibacteria, Bacteria
|
Not on your lists |
9115..10050
|
seg (db=Seg db_id=seg from=290 to=299)
seg 290..299 Tax=ACD3
|
|
ACD3_27_10
unknown
|
Not on your lists |
comp(10111..11541)
|
23S rRNA m(5)U-1939 methyltransferase n=2 Tax=Clostridiales RepID=D4MWB4_9FIRM (db=UNIREF evalue=9.0e-72 bit_score=275.0 identity=35.89 coverage=94.1299790356394)
23S rRNA m(5)U-1939 methyltransferase (EC:2.1.1.-)
TRMA_2 (db=PatternScan db_id=PS01231 from=459 to=469 evalue=0.0 interpro_id=IPR010280 interpro_description=(Uracil-5)-methyltransferase GO=Biological Process: RNA processing (GO:0006396), Molecular Function: RNA methyltransferase activity (GO:0008173))
RNA M5U METHYLTRANSFERASE (db=HMMPanther db_id=PTHR11061:SF2 from=37 to=476 evalue=9.0e-91)
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ACD3_27_11
ACD3, Gracilibacteria, Bacteria
|
Not on your lists |
11821..12018
|
11821..12018 + (rbs_motif=TTAA rbs_spacer=10bp)
hypothetical protein Tax=ACD3
|
|
ACD3_27_12
unknown
|
Not on your lists |
12205..12663
|
Putative uncharacterized protein n=1 Tax=Candidatus Pelagibacter sp. HTCC7211 RepID=B6BST4_9RICK (db=UNIREF evalue=4.0e-10 bit_score=67.0 identity=25.93 coverage=86.9281045751634)
SCE87.16c; hypothetical protein (db=KEGG evalue=8.0e-09 bit_score=62.4 identity=23.97 coverage=76.4705882352941)
YbaK/ProRS associated domain (db=superfamily db_id=SSF55826 from=1 to=151 evalue=5.0e-15 interpro_id=IPR007214 interpro_description=YbaK/aminoacyl-tRNA synthetase-associated domain)
|
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ACD3_27_13
ACD3, Gracilibacteria, Bacteria
|
Not on your lists |
12774..13172
|
seg (db=Seg db_id=seg from=17 to=26)
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (db=superfamily db_id=SSF54593 from=1 to=122 evalue=3.9e-19)
no description (db=Gene3D db_id=G3DSA:3.10.180.10 from=6 to=123 evalue=1.6e-10)
|
|
ACD3_27_14
ACD3, Gracilibacteria, Bacteria
|
Not on your lists |
13371..13655
|
13371..13655 + (rbs_motif=TTAA rbs_spacer=8bp)
hypothetical protein Tax=ACD3
|
|
ACD3_27_15
uncultured bacterium (gcode 4), Bacteria
|
Not on your lists |
13675..14292
|
Protein-L-isoaspartate(D-aspartate) O-methyltransferase (EC:2.1.1.77)
seg (db=Seg db_id=seg from=154 to=168)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=3 to=205 evalue=4.6e-42)
PCMT (db=HMMPfam db_id=PF01135 from=7 to=204 evalue=2.3e-36 interpro_id=IPR000682 interpro_description=Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO=Molecular Function: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity (GO:0004719), Biological Process: protein modification process (GO:0006464))
|
|
ACD3_27_16
ACD3, Gracilibacteria, Bacteria
|
Not on your lists |
14418..14843
|
Glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (db=superfamily db_id=SSF54593 from=1 to=138 evalue=3.7e-25)
no description (db=Gene3D db_id=G3DSA:3.10.180.30 from=1 to=137 evalue=3.1e-21)
3-dmu-9_3-mt (db=HMMPfam db_id=PF06983 from=3 to=135 evalue=3.8e-06)
|
|
ACD3_27_17
unknown
|
Not on your lists |
14909..15178
|
Pathogenicity locus n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1Z6_9FIRM (db=UNIREF evalue=1.0e-17 bit_score=92.0 identity=51.85 coverage=88.8888888888889)
Pathogenicity locus.
Cdd1 (db=HMMPfam db_id=PF11731 from=3 to=87 evalue=3.9e-22 interpro_id=IPR021725 interpro_description=Pathogenicity locus)
Pathogenicity locus n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1Z6_9FIRM Tax=ACD3
|
|
ACD3_27_18
ACD3, Gracilibacteria, Bacteria
|
Not on your lists |
15197..15823
|
metallo-beta-lactamase family protein (db=KEGG evalue=2.0e-21 bit_score=105.0 identity=37.14 coverage=79.9043062200957)
seg (db=Seg db_id=seg from=107 to=117)
Metallo-hydrolase/oxidoreductase (db=superfamily db_id=SSF56281 from=7 to=197 evalue=3.3e-36)
no description (db=Gene3D db_id=G3DSA:3.60.15.10 from=18 to=195 evalue=8.2e-27)
|
|
ACD3_27_19
ACD3, Gracilibacteria, Bacteria
|
Not on your lists |
comp(15874..16422)
|
seg (db=Seg db_id=seg from=18 to=28)
transmembrane_regions (db=TMHMM db_id=tmhmm from=17 to=39)
seg 18..28 Tax=ACD3
|
|
ACD3_27_20
ACD3, Gracilibacteria, Bacteria
|
Not on your lists |
16534..17178
|
ribonuclease HII
seg (db=Seg db_id=seg from=67 to=84)
coiled-coil (db=Coil db_id=coil from=44 to=65 evalue=NA)
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=4 to=203 evalue=4.7e-36 interpro_id=IPR012337 interpro_description=Polynucleotidyl transferase, ribonuclease H fold GO=Molecular Function: nucleic acid binding (GO:0003676))
|
|
ACD3_27_21
uncultured bacterium (gcode 4), Bacteria
|
Not on your lists |
17197..18261
|
coiled-coil (db=Coil db_id=coil from=34 to=72 evalue=NA)
seg (db=Seg db_id=seg from=85 to=100)
seg (db=Seg db_id=seg from=219 to=252)
seg (db=Seg db_id=seg from=335 to=346)
|
|
ACD3_27_22
ACD3, Gracilibacteria, Bacteria
|
Not on your lists |
comp(18387..18794)
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=7 to=29)
seg 7..29 Tax=ACD3
|
|
ACD3_27_23
uncultured bacterium (gcode 4), Bacteria
|
Not on your lists |
18882..20243
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=32)
seg (db=Seg db_id=seg from=271 to=281)
seg (db=Seg db_id=seg from=15 to=30)
Uncharacterized protein {ECO:0000313|EMBL:EKE27319.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
|
|
ACD3_27_24
ACD3, Gracilibacteria, Bacteria
|
Not on your lists |
20248..22332
|
adenylate cyclase
transmembrane_regions (db=TMHMM db_id=tmhmm from=322 to=341)
transmembrane_regions (db=TMHMM db_id=tmhmm from=346 to=363)
transmembrane_regions (db=TMHMM db_id=tmhmm from=376 to=398)
|
|
ACD3_27_25
ACD3, Gracilibacteria, Bacteria
|
Not on your lists |
comp(22844..24568)
|
coiled-coil (db=Coil db_id=coil from=234 to=255 evalue=NA)
seg (db=Seg db_id=seg from=558 to=569)
seg (db=Seg db_id=seg from=302 to=311)
seg (db=Seg db_id=seg from=27 to=38)
|
|
ACD3_27_26
ACD3, Gracilibacteria, Bacteria
|
Not on your lists |
comp(24611..25048)
|
24611..25048 - (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=ACD3
|