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ACD3_51

Alias: ACD3_2678.11378.65

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD3_51_1
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(3..941)
DNA (939bp) protein (313aa)
seg (db=Seg db_id=seg from=236 to=247)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
seg (db=Seg db_id=seg from=21 to=42)
Pili subunits (db=superfamily db_id=SSF54523 from=21 to=179 evalue=5.8e-15)
ACD3_51_2
ACD3, Gracilibacteria, Bacteria

Not on your lists

1022..1549
DNA (528bp) protein (176aa)
acetyltransferase
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=5 to=167 evalue=5.7e-26 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
no description (db=Gene3D db_id=G3DSA:3.40.630.30 from=5 to=170 evalue=2.7e-19 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
GCN5-related N-acetyltransferase; K00657 diamine N-acetyltransferase [EC:2.3.1.57] alias=ACD3_2678.11378.65G0002,ACD3_2678.11378.65_2,ACD3_C00051G00002 id=50686 tax=ACD3 species=Polynucleobacter necessarius genus=Polynucleobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria organism_group=BD1-5 organism_desc=BD1-5
arginine proline Jill Banfield (11/15/12)
ACD3_51_3

Not on your lists

1678..3171
DNA (1494bp) protein (498aa)
dnaX; DNA polymerase III subunit gamma/tau (EC:2.7.7.7)
DNA polymerase III, subunits gamma and tau n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=C7IJL3_9CLOT (db=UNIREF evalue=1.0e-69 bit_score=267.0 identity=42.82 coverage=67.6706827309237)
seg (db=Seg db_id=seg from=83 to=94)
seg (db=Seg db_id=seg from=427 to=436)
ACD3_51_4
ACD3, Gracilibacteria, Bacteria

Not on your lists

3484..4722
DNA (1239bp) protein (413aa)
membrane protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
seg (db=Seg db_id=seg from=71 to=81)
seg (db=Seg db_id=seg from=21 to=52)
ACD3_51_5

Not on your lists

4774..6285
DNA (1512bp) protein (504aa)
seg (db=Seg db_id=seg from=271 to=291)
seg (db=Seg db_id=seg from=11 to=32)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
Pili subunits (db=superfamily db_id=SSF54523 from=11 to=138 evalue=6.3e-17)
ACD3_51_6
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(6318..7490)
DNA (1173bp) protein (391aa)
Queuine tRNA-ribosyltransferase n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TQM8_ALKMQ (db=UNIREF evalue=1.0e-106 bit_score=390.0 identity=51.55 coverage=92.8388746803069)
queuine tRNA-ribosyltransferase (EC:2.4.2.29)
queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Q_tRNA_tgt: queuine tRNA-ribosyltransfera (db=HMMTigr db_id=TIGR00430 from=4 to=390 evalue=7.1e-130 interpro_id=IPR004803 interpro_description=Queuine tRNA-ribosyltransferase GO=Biological Process: tRNA processing (GO:0008033), Molecular Function: queuine tRNA-ribosyltransferase activity (GO:0008479), Biological Process: queuosine biosynthetic process (GO:0008616))
ACD3_51_7
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(7567..8022)
DNA (456bp) protein (152aa)
7567..8022 - (rbs_motif=TTAA rbs_spacer=12bp)
hypothetical protein Tax=ACD3
ACD3_51_8
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(8138..9343)
DNA (1206bp) protein (402aa)
rseP; RIP metalloprotease RseP (EC:3.4.24.-)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
transmembrane_regions (db=TMHMM db_id=tmhmm from=104 to=126)
transmembrane_regions (db=TMHMM db_id=tmhmm from=319 to=341)
ACD3_51_9
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(9410..9712)
DNA (303bp) protein (101aa)
9410..9712 - (rbs_motif=TAA rbs_spacer=11bp)
hypothetical protein Tax=ACD3
ACD3_51_10
ACD3, Gracilibacteria, Bacteria

Not on your lists

comp(9836..10402)
DNA (567bp) protein (189aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=22)
N_methyl (db=HMMPfam db_id=PF07963 from=4 to=18 evalue=2.7e-05 interpro_id=IPR012902 interpro_description=Prepilin-type cleavage/methylation, N-terminal)
IV_pilin_GFxxxE: prepilin-type N-term (db=HMMTigr db_id=TIGR02532 from=3 to=26 evalue=0.00022 interpro_id=IPR012902 interpro_description=Prepilin-type cleavage/methylation, N-terminal)
transmembrane_regions 5..22 Tax=ACD3
ACD3_51_11
ACD3, Gracilibacteria, Bacteria

Not on your lists

10557..11441
DNA (885bp) protein (295aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=136 to=153)
seg (db=Seg db_id=seg from=254 to=284)
Fibronectin type III (db=superfamily db_id=SSF49265 from=26 to=136 evalue=5.8e-09 interpro_id=IPR008957 interpro_description=Fibronectin, type III-like fold)
Displaying 11 items

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