Alias: ACD3_1083.19838.69
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACD3_58_1
ACD3, Gracilibacteria, Bacteria
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Not on your lists |
317..907
|
seg (db=Seg db_id=seg from=176 to=187)
seg (db=Seg db_id=seg from=113 to=126)
seg (db=Seg db_id=seg from=16 to=26)
transmembrane_regions (db=TMHMM db_id=tmhmm from=170 to=189)
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ACD3_58_2
ACD3, Gracilibacteria, Bacteria
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Not on your lists |
comp(1006..1425)
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Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=1 to=139 evalue=8.4e-19 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
no description (db=Gene3D db_id=G3DSA:3.40.630.30 from=1 to=128 evalue=1.2e-09 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
Acetyltransf_1 (db=HMMPfam db_id=PF00583 from=65 to=125 evalue=2.8e-07 interpro_id=IPR022610 interpro_description=GCN5-related N-acetyltransferase, C-terminal)
GNAT (db=ProfileScan db_id=PS51186 from=1 to=139 evalue=17.762 interpro_id=IPR000182 interpro_description=GCN5-related N-acetyltransferase GO=Molecular Function: N-acetyltransferase activity (GO:0008080), Biological Process: metabolic process (GO:0008152))
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ACD3_58_3
unknown
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Not on your lists |
comp(1472..3565)
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sodium/hydrogen exchanger
Putative sodium/hydrogen exchanger family protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0EW88_9PROT (db=UNIREF evalue=9.0e-44 bit_score=182.0 identity=29.96 coverage=72.7793696275072)
transmembrane_regions (db=TMHMM db_id=tmhmm from=231 to=253)
transmembrane_regions (db=TMHMM db_id=tmhmm from=294 to=316)
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ACD3_58_4
ACD3, Gracilibacteria, Bacteria
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Not on your lists |
comp(3843..4982)
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cardiolipin synthetase; K06131 cardiolipin synthase [EC:2.7.8.-] (db=KEGG evalue=4.0e-16 bit_score=89.4 identity=23.34 coverage=89.2105263157895)
Phospholipase D/nuclease (db=superfamily db_id=SSF56024 from=216 to=379 evalue=1.0e-19)
no description (db=Gene3D db_id=G3DSA:3.30.870.10 from=216 to=363 evalue=6.6e-15)
Phospholipase D/nuclease (db=superfamily db_id=SSF56024 from=5 to=177 evalue=3.5e-14)
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ACD3_58_5
ACD3, Gracilibacteria, Bacteria
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Not on your lists |
comp(5127..5273)
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5127..5273 - (rbs_motif=TTAA rbs_spacer=11bp)
hypothetical protein Tax=ACD3
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ACD3_58_6
ACD3, Gracilibacteria, Bacteria
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Not on your lists |
comp(5292..5600)
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seg (db=Seg db_id=seg from=81 to=94)
coiled-coil (db=Coil db_id=coil from=74 to=95 evalue=NA)
coiled-coil 74..95 Tax=ACD3
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ACD3_58_7
ACD3, Gracilibacteria, Bacteria
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Not on your lists |
comp(5681..5872)
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seg (db=Seg db_id=seg from=19 to=30)
seg 19..30 Tax=ACD3
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ACD3_58_8
ACD3, Gracilibacteria, Bacteria
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Not on your lists |
comp(5857..7290)
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seg (db=Seg db_id=seg from=46 to=58)
seg (db=Seg db_id=seg from=327 to=339)
coiled-coil (db=Coil db_id=coil from=46 to=67 evalue=NA)
Nucleotide cyclase (db=superfamily db_id=SSF55073 from=133 to=299 evalue=3.6e-10 interpro_id=IPR001054 interpro_description=Adenylyl cyclase class-3/4/guanylyl cyclase GO=Biological Process: cyclic nucleotide biosynthetic process (GO:0009190), Molecular Function: phosphorus-oxygen lyase activity (GO:0016849), Biological Process: intracellular signaling pathway (GO:0023034))
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ACD3_58_9
ACD3, Gracilibacteria, Bacteria
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Not on your lists |
7405..8520
|
Protein YpsC
seg (db=Seg db_id=seg from=67 to=79)
seg (db=Seg db_id=seg from=175 to=187)
N6_MTASE (db=PatternScan db_id=PS00092 from=300 to=306 evalue=0.0 interpro_id=IPR002052 interpro_description=DNA methylase, N-6 adenine-specific, conserved site GO=Molecular Function: nucleic acid binding (GO:0003676), Molecular Function: methyltransferase activity (GO:0008168), Biological Process: methylation (GO:0032259))
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ACD3_58_10
ACD3, Gracilibacteria, Bacteria
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Not on your lists |
comp(8529..8867)
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8529..8867 - (rbs_motif=TAA rbs_spacer=11bp)
hypothetical protein Tax=ACD3
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ACD3_58_11
ACD3, Gracilibacteria, Bacteria
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Not on your lists |
comp(8871..9077)
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8871..9077 - (rbs_motif=TTAA rbs_spacer=10bp)
hypothetical protein Tax=ACD3
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ACD3_58_12
ACD3, Gracilibacteria, Bacteria
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Not on your lists |
comp(9204..10097)
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miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
seg (db=Seg db_id=seg from=185 to=197)
miaA: tRNA delta(2)-isopentenylpyrophosphate (db=HMMTigr db_id=TIGR00174 from=20 to=297 evalue=1.4e-54 interpro_id=IPR018022 interpro_description=tRNA delta(2)-isopentenylpyrophosphate transferase)
IPPT (db=HMMPfam db_id=PF01715 from=53 to=296 evalue=3.2e-53 interpro_id=IPR002627 interpro_description=tRNA isopentenyltransferase GO=Molecular Function: tRNA isopentenyltransferase activity (GO:0004811), Molecular Function: ATP binding (GO:0005524), Biological Process: tRNA processing (GO:0008033))
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ACD3_58_13
uncultured bacterium (gcode 4), Bacteria
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Not on your lists |
10429..11067
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metal dependent phosphohydrolase
HD (db=HMMPfam db_id=PF01966 from=25 to=126 evalue=1.8e-11 interpro_id=IPR006674 interpro_description=Metal-dependent phosphohydrolase, HD subdomain)
HD-domain/PDEase-like (db=superfamily db_id=SSF109604 from=1 to=137 evalue=8.4e-09)
no description (db=HMMSmart db_id=SM00471 from=19 to=137 evalue=2.0e-05 interpro_id=IPR003607 interpro_description=Metal-dependent phosphohydrolase, HD domain GO=Molecular Function: catalytic activity (GO:0003824))
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ACD3_58_14
ACD3, Gracilibacteria, Bacteria
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Not on your lists |
11136..11690
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11136..11690 + (rbs_motif=TTA rbs_spacer=13bp)
hypothetical protein Tax=ACD3
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ACD3_58_15
uncultured bacterium (gcode 4), Bacteria
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Not on your lists |
comp(11730..13367)
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60 kDa chaperonin n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EA03_9CLOT (db=UNIREF evalue=2.0e-149 bit_score=533.0 identity=52.5 coverage=97.4358974358974)
hypothetical protein
hypothetical protein
coiled-coil (db=Coil db_id=coil from=338 to=359 evalue=NA)
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ACD3_58_16
ACD3, Gracilibacteria, Bacteria
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Not on your lists |
comp(13400..13828)
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transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
transmembrane_regions (db=TMHMM db_id=tmhmm from=117 to=136)
transmembrane_regions 7..26 Tax=ACD3
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ACD3_58_17
uncultured bacterium (gcode 4), Bacteria
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Not on your lists |
comp(14152..14442)
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10 kDa chaperonin n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MKD5_9FIRM (db=UNIREF evalue=8.0e-16 bit_score=85.9 identity=44.21 coverage=95.8762886597938)
groES; co-chaperonin GroES; K04078 chaperonin GroES (db=KEGG evalue=5.0e-15 bit_score=83.2 identity=42.11 coverage=95.8762886597938)
GROES CHAPERONIN (db=HMMPanther db_id=PTHR10772 from=1 to=96 evalue=3.2e-18 interpro_id=IPR001476 interpro_description=Chaperonin Cpn10, subgroup GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: protein folding (GO:0006457))
GroES-like (db=superfamily db_id=SSF50129 from=1 to=96 evalue=3.8e-18 interpro_id=IPR011032 interpro_description=GroES-like)
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ACD3_58_18
ACD3, Gracilibacteria, Bacteria
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Not on your lists |
comp(14614..15258)
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metal-dependent phosphohydrolase
coiled-coil (db=Coil db_id=coil from=184 to=205 evalue=NA)
seg (db=Seg db_id=seg from=103 to=114)
metal dependent phosphohydrolase alias=ACD3_C00058G00018,ACD3_1083.19838.69G0018,ACD3_1083.19838.69_18 id=50795 tax=ACD3 species=Dyadobacter fermentans genus=Dyadobacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes organism_group=BD1-5 organism_desc=BD1-5
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ACD3_58_19
uncultured bacterium (gcode 4), Bacteria
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Not on your lists |
15367..16926
|
hypothetical protein
hypothetical protein
Lysyl-tRNA synthetase n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KMI1_CLOPH (db=UNIREF evalue=1.0e-104 bit_score=384.0 identity=37.89 coverage=91.1538461538461)
seg (db=Seg db_id=seg from=217 to=226)
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ACD3_58_20
ACD3, Gracilibacteria, Bacteria
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Not on your lists |
comp(16961..17242)
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16961..17242 - (rbs_motif=TTAA rbs_spacer=11bp)
hypothetical protein Tax=ACD3
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ACD3_58_21
unknown
|
Not on your lists |
17564..18664
|
hypothetical protein
GTP-binding proten HflX n=1 Tax=Frankia sp. EUN1f RepID=D3D4N3_9ACTO (db=UNIREF evalue=6.0e-60 bit_score=234.0 identity=38.19 coverage=95.0953678474115)
GTP_HflX: GTP-binding protein HflX (db=HMMTigr db_id=TIGR03156 from=2 to=366 evalue=4.4e-109 interpro_id=IPR016496 interpro_description=GTP-binding protein, HflX)
GTP-BINDING PROTEIN HFLX (db=HMMPanther db_id=PTHR10229 from=60 to=366 evalue=1.2e-89)
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ACD3_58_22
ACD3, Gracilibacteria, Bacteria
|
Not on your lists |
18826..19383
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=155 to=174)
transmembrane_regions (db=TMHMM db_id=tmhmm from=84 to=106)
transmembrane_regions (db=TMHMM db_id=tmhmm from=113 to=135)
transmembrane_regions (db=TMHMM db_id=tmhmm from=34 to=56)
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ACD3_58_23
ACD3, Gracilibacteria, Bacteria
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Not on your lists |
comp(19396..19806)
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coiled-coil (db=Coil db_id=coil from=88 to=116 evalue=NA)
ATP SYNTHASE DELTA/EPSILON CHAIN (db=HMMPanther db_id=PTHR13822 from=1 to=131 evalue=1.7e-12 interpro_id=IPR001469 interpro_description=ATPase, F1 complex, delta/epsilon subunit GO=Biological Process: ATP synthesis coupled proton transport (GO:0015986), Cellular Component: proton-transporting ATP synthase complex, catalytic core F(1) (GO:0045261), Molecular Function: hydrogen ion transporting ATP synthase activity, rotational mechanism (GO:0046933), Molecular Function: proton-transporting ATPase activity, r
ATP_synt_epsi: ATP synthase F1, epsilon (db=HMMTigr db_id=TIGR01216 from=1 to=131 evalue=6.6e-11 interpro_id=IPR001469 interpro_description=ATPase, F1 complex, delta/epsilon subunit GO=Biological Process: ATP synthesis coupled proton transport (GO:0015986), Cellular Component: proton-transporting ATP synthase complex, catalytic core F(1) (GO:0045261), Molecular Function: hydrogen ion transporting ATP synthase activity, rotational mechanism (GO:0046933), Molecular Function: proton-transporting ATPase activit
ATP-synt_DE_N (db=HMMPfam db_id=PF02823 from=1 to=78 evalue=3.2e-10 interpro_id=IPR020546 interpro_description=ATPase, F1 complex, delta/epsilon subunit, N-terminal GO=Biological Process: ATP synthesis coupled proton transport (GO:0015986), Cellular Component: proton-transporting ATP synthase complex, catalytic core F(1) (GO:0045261), Molecular Function: hydrogen ion transporting ATP synthase activity, rotational mechanism (GO:0046933), Molecular Function: proton-transporting ATPase activity, rotational mec
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ACD3_58_24
unknown
|
Not on your lists |
19838..19900
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19838..19900 + (rbs_motif=TTAA rbs_spacer=12bp)
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