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ACD3_29_21

Organism: ACD3

near complete RP 47 / 55 MC: 12 BSCG 46 / 51 MC: 3 ASCG 0 / 38
Location: comp(15908..16462)

Top 3 Functional Annotations

Value Algorithm Source
LSU ribosomal protein L6P similarity KEGG
DB: KEGG
  • Identity: 53.0
  • Coverage: 183.0
  • Bit_score: 171
  • Evalue 2.10e-40
L6_bact: ribosomal protein L6 (db=HMMTigr db_id=TIGR03654 from=2 to=180 evalue=2.8e-78 interpro_id=IPR019906 interpro_description=Ribosomal protein L6, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 2.80e-78
60S/50S RIBOSOMAL PROTEIN L6/L9 (db=HMMPanther db_id=PTHR11655 from=2 to=183 evalue=1.0e-64 interpro_id=IPR000702 interpro_description=Ribosomal protein L6 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: HMMPanther
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.00e-64

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Taxonomy

uncultured bacterium (gcode 4) → Bacteria

Sequences

DNA sequence
Length: 555
ATGTCACGAATCTGAAAATCACCAATCCAAATCCCGTCTGCAGTTACTGTTGAACTTAAGAATAATGTTGTGACAGTAAAAGGCCCAAAAGGCGAACTTACACAAGATGTAAGAGACTTTGTTTCTATAAATCAAGTTGAAAACACTCTAACTGTTTCAGTTAAAGATGAAAATGAGACTTTCCAAAGATGAGTATGGGGACTTACAAGAACTCTAGTAAACAATATGGTTATCTGAGTCACTGTAGGATACCAAAAAATACTTGAAATACAATGAGTAGGTTATAAATTCGAAGTTGTCGGTACTGATAAATTGACTCTTTCTGTAGGTTTCTCTCATAAAGTTGAACTGCAAGCTCCAAAATGATTATCTGTTGCCGTTGAGCCTTCAATCAAGAATGCAATTGTAATAACATGAATAGATAAGCAACTTGTTGGTTTCTTCGCTGCGAAAGTAAGAGCAATCAAAAAACCTGAACCATATAAGGGTAAATGAATCAGATACTCTGGTGAATACGTAAGAAGAAAAGCGGGTAAGACATGAGGTAAGAAATAA
PROTEIN sequence
Length: 185
MSRIGKSPIQIPSAVTVELKNNVVTVKGPKGELTQDVRDFVSINQVENTLTVSVKDENETFQRGVWGLTRTLVNNMVIGVTVGYQKILEIQGVGYKFEVVGTDKLTLSVGFSHKVELQAPKGLSVAVEPSIKNAIVITGIDKQLVGFFAAKVRAIKKPEPYKGKGIRYSGEYVRRKAGKTGGKK*