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sw_4_scaffold_4268

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_4268_1
Alcanivorax sp. PN-3, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..195
DNA (195bp) protein (65aa)
50S ribosomal protein L7/L12 n=1 Tax=Alcanivorax sp. PN-3 RepID=U7HRQ7_9GAMM
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1397526 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcani
rplL; 50S ribosomal protein L7/L12
sw_4_scaffold_4268_2

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492..1046
DNA (555bp) protein (185aa)
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:KKS35879.1}; TaxID=1618952 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_42_14.;"
seg id=5803313 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
sw_4_scaffold_4268_3
R_OD1_56_18, Parcubacteria, Bacteria

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1085..1714
DNA (630bp) protein (210aa)
small-conductance mechanosensitive ion channel Tax=RIFCSPHIGHO2_01_FULL_OD1_56_18_curated
small-conductance mechanosensitive ion channel id=5803314 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
small-conductance mechanosensitive ion channel
sw_4_scaffold_4268_4
Leptospira interrogans, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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2012..2164
DNA (153bp) protein (51aa)
tufB; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu n=7 Tax=Leptospira borgpetersenii RepID=M6UUQ5_LEPBO
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1001599 species="Bacteria; Spirochaetes; Leptospirales; Lep
sw_4_scaffold_4268_5
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

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2161..3081
DNA (921bp) protein (307aa)
elongation factor Tu; K02358 elongation factor Tu Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
id=5227355 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
elongation factor Tu
sw_4_scaffold_4268_6
R_OD1_Campbellbacteria_35_11, Campbellbacteria, Parcubacteria, Bacteria

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3101..3448
DNA (348bp) protein (116aa)
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 Tax=RIFCSPLOWO2_02_FULL_OD1_Campbellbacteria_35_11_curated
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 id=5802994 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rpsJ; 30S ribosomal protein S10
sw_4_scaffold_4268_7
GWA2_OD1_53_7_partial, Giovannonibacteria, Parcubacteria, Bacteria

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3711..4079
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA040-L21 RepID=UPI000362BDA6
50S ribosomal protein L3 Tax=GWA2_OD1_53_7_partial
rplC; 50S ribosomal protein L3
sw_4_scaffold_4268_8
R_OD1_Campbellbacteria_35_11, Campbellbacteria, Parcubacteria, Bacteria

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4093..4770
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA040-L21 RepID=UPI000379857F
50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 Tax=RIFCSPLOWO2_02_FULL_OD1_Campbellbacteria_35_11_curated
50S ribosomal protein L4P
sw_4_scaffold_4268_9
Parcubacteria bacterium GW2011_GWC1_39_8, Parcubacteria, Bacteria

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4772..5161
DNA (390bp) protein (130aa)
50S ribosomal protein L23 {ECO:0000313|EMBL:KKR30906.1}; TaxID=1618901 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_39_8.;"
50S ribosomal protein L23 id=4795590 bin=GWC2_Nitrospirae-rel_56_14 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
rplW; 50S ribosomal protein L23
sw_4_scaffold_4268_10
R_RIF_OD1_11_45_35, RIF-OD1-11, Parcubacteria, Bacteria

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5189..6031
DNA (843bp) protein (281aa)
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_45_35_curated
Translation protein SH3-like id=5802990 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rplB; 50S ribosomal protein L2
sw_4_scaffold_4268_11
unknown

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comp(6095..6448)
DNA (354bp) protein (118aa)

This feature has no annotations

Displaying 11 items

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