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sw_6_scaffold_1565

Search features with annotation key words

Displaying 22 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_1565_1
unknown

Not on your lists

comp(1..60)
DNA (60bp) protein (20aa)

This feature has no annotations

sw_6_scaffold_1565_2
RIFOXYD1_FULL_OD1_46_19_curated, Parcubacteria, Bacteria

Not on your lists


161..856
DNA (696bp) protein (232aa)
50S ribosomal protein L3 n=1 Tax=Haloplasma contractile SSD-17B RepID=U2EBB7_9BACT
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 Tax=RIFOXYD1_FULL_OD1_46_19_curated
50S ribosomal protein L3
sw_6_scaffold_1565_3
GWC1_OD1_35_31, Campbellbacteria, Parcubacteria, Bacteria

Not on your lists


1173..1505
DNA (333bp) protein (111aa)
50S ribosomal protein L4 {ECO:0000313|EMBL:KKP76539.1}; TaxID=1618629 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Campbellbacteria) bacterium GW2011_GWC1_35_31.;"
50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 id=5802992 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
sw_6_scaffold_1565_4
R_OD1_Kaiserbacteria_51_21, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists


1512..1916
DNA (405bp) protein (135aa)
50S ribosomal protein L23 n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z1M2_9ACTN
50S ribosomal protein L25; K02892 large subunit ribosomal protein L23 Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_51_21_curated
LSU ribosomal protein L23p (L23Ae)
sw_6_scaffold_1565_5
R_OD1_Adlerbacteria_51_16, Adlerbacteria, Parcubacteria, Bacteria

Not on your lists


1927..2757
DNA (831bp) protein (277aa)
50S ribosomal protein L2 n=1 Tax=Vibrio marinus RepID=UPI00031C3DCE
50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 Tax=RIFCSPLOWO2_01_FULL_OD1_Adlerbacteria_51_16_curated
rplB; 50S ribosomal protein L2
sw_6_scaffold_1565_6
unknown

Not on your lists

comp(3126..3530)
DNA (405bp) protein (135aa)

This feature has no annotations

sw_6_scaffold_1565_7
R_RIF_OD1_13_47_11, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

3772..4443
DNA (672bp) protein (224aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_13_47_11_curated
hypothetical protein id=53212 bin=ACD41 species=ACD41 genus=ACD41 taxon_order=ACD41 taxon_class=ACD41 phylum=OD1 tax=ACD41 organism_group=OD1 (Parcubacteria) organism_desc=OD1
tRNA ligase
sw_6_scaffold_1565_8
unknown

Not on your lists

comp(4478..4609)
DNA (132bp) protein (44aa)

This feature has no annotations

sw_6_scaffold_1565_9
R_OD1_Kaiserbacteria_54_22, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists


4920..5264
DNA (345bp) protein (115aa)
rpsS; ribosomal protein S19 (BS19) Tax=RIFCSPHIGHO2_02_FULL_OD1_Kaiserbacteria_54_22_curated
30S ribosomal protein S19 id=5227349 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
30S ribosomal protein S19
sw_6_scaffold_1565_10
Olsenella sp. oral taxon 809, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


5332..5664
DNA (333bp) protein (111aa)
50S ribosomal protein L22 n=1 Tax=Olsenella sp. oral taxon 809 str. F0356 RepID=G5F2N1_9ACTN
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=661087 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;"
ribosomal protein L22, bacterial type
sw_6_scaffold_1565_11
R_OD1_Campbellbacteria_35_12, Campbellbacteria, Parcubacteria, Bacteria

Not on your lists


5720..6424
DNA (705bp) protein (235aa)
rpsC; 30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=RIFCSPLOWO2_02_OD1_Campbellbacteria_35_12_curated
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 id=5803317 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rpsC; 30S ribosomal protein S3
sw_6_scaffold_1565_12
GWC1_OD1_35_31, Campbellbacteria, Parcubacteria, Bacteria

Not on your lists


6427..6855
DNA (429bp) protein (143aa)
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 id=5803318 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
50S ribosomal protein L16 {ECO:0000313|EMBL:KKP77465.1}; TaxID=1618629 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Campbellbacteria) bacterium GW2011_GWC1_35_31.;"
rplP; Ribosomal protein L16
sw_6_scaffold_1565_13
CG_Nomura_04, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


6852..7052
DNA (201bp) protein (67aa)
Ribosomal protein L29 Tax=CG_Nomura_04
sw_6_scaffold_1565_14
R_RIF_OD1_09_51_10, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists


7042..7299
DNA (258bp) protein (86aa)
30S ribosomal protein S17 n=2 Tax=Rhodothermus marinus RepID=D0MGW3_RHOM4
rpsQ; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_09_51_10_curated
30S ribosomal protein S17
sw_6_scaffold_1565_15
R_RIF_OD1_11_46_22, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


7303..7674
DNA (372bp) protein (124aa)
50S ribosomal protein L14 n=1 Tax=Parcubacteria bacterium SCGC AAA040-L21 RepID=UPI0003812F16
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_11_46_22_curated
50S ribosomal protein L14
sw_6_scaffold_1565_16
Bacillus coagulans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


7786..8001
DNA (216bp) protein (72aa)
50S ribosomal protein L24 n=1 Tax=Bacillus coagulans 36D1 RepID=G2TI92_BACCO
50S ribosomal protein L24
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=345219 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus coagulans 36D1.;"
sw_6_scaffold_1565_17
GWA2_OD1_51_10, Parcubacteria, Bacteria

Not on your lists


8006..8569
DNA (564bp) protein (188aa)
50S ribosomal protein L5 n=1 Tax=Parcubacteria bacterium SCGC AAA040-L21 RepID=UPI0003608887
50S ribosomal protein L5 {ECO:0000313|EMBL:KKW19052.1}; TaxID=1618855 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_51_10.;"
50S ribosomal protein L5
sw_6_scaffold_1565_18
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


8656..8925
DNA (270bp) protein (90aa)
30S ribosomal protein S14 n=1 Tax=Lewinella persica RepID=UPI00036C5851
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeoda
rpsN; 30S ribosomal protein s14
sw_6_scaffold_1565_19
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists


8919..9308
DNA (390bp) protein (130aa)
30S ribosomal protein S8 n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002DDD632
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
30S ribosomal protein S8
sw_6_scaffold_1565_20
unknown

Not on your lists

9391..9546
DNA (156bp) protein (52aa)

This feature has no annotations

sw_6_scaffold_1565_21
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9530..10063
DNA (534bp) protein (178aa)
50S ribosomal protein L6 n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=RL6_METSB
rplF; 50S ribosomal protein L6
50S ribosomal protein L6 {ECO:0000255|HAMAP-Rule:MF_01365}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella sil
sw_6_scaffold_1565_22
Jeotgalibacillus alimentarius, Jeotgalibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


10066..10398
DNA (333bp) protein (111aa)
50S ribosomal protein L18 n=1 Tax=Aerococcus urinae (strain ACS-120-V-Col10a) RepID=F2I7T2_AERUA
rplR; 50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000313|EMBL:KIL53635.1}; TaxID=135826 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Jeotgalibacillus.;" source="J
Displaying 22 items

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