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sw_6_scaffold_3806

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_3806_1
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(3..830)
DNA (828bp) protein (276aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
hypothetical protein id=5227042 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
M23 peptidase domain-containing protein
sw_6_scaffold_3806_2
RIFCSPLOWO2_12_FULL_RIF_OD1_10_39_16_curated, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(860..1579)
DNA (720bp) protein (240aa)
50S ribosomal protein L25/general stress protein Ctc Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_10_39_16_curated
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; K02897 large subunit ribosomal protein L25 id=5803352 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rplY; 50S ribosomal protein L25
sw_6_scaffold_3806_3
unknown

Not on your lists

1688..1993
DNA (306bp) protein (102aa)

This feature has no annotations

sw_6_scaffold_3806_4
R_OD1_45_48, Parcubacteria, Bacteria

Not on your lists

2057..2941
DNA (885bp) protein (295aa)
putative Ribokinase (EC:2.7.1.15) Tax=RIFCSPLOWO2_01_FULL_OD1_45_48_curated
carbohydrate kinase PfkB; K00852 ribokinase [EC:2.7.1.15] id=5803344 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Sugar kinase, ribokinase family
sw_6_scaffold_3806_5
unknown

Not on your lists

comp(3419..3670)
DNA (252bp) protein (84aa)

This feature has no annotations

sw_6_scaffold_3806_6
R_OD1_Kaiserbacteria_54_11b, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(4538..5122)
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037A71CB
type II secretion system protein G; K02456 general secretion pathway protein G Tax=RIFCSPHIGHO2_02_FULL_OD1_Kaiserbacteria_54_11b_curated
gspG; general secretion pathway protein G
sw_6_scaffold_3806_7
unknown

Not on your lists

comp(5228..5692)
DNA (465bp) protein (155aa)

This feature has no annotations

sw_6_scaffold_3806_8
R_OD1_Kaiserbacteria_51_21, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

comp(5718..6710)
DNA (993bp) protein (331aa)
transketolase; K00615 transketolase [EC:2.2.1.1] Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_51_21_curated
Putative transketolase C-terminal section (TK) id=4790069 bin=GWC2_OD1_43_27 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
transketolase
sw_6_scaffold_3806_9
unknown

Not on your lists

comp(6913..7260)
DNA (348bp) protein (116aa)

This feature has no annotations

sw_6_scaffold_3806_10
R_OD1_Nomurabacteria_33_24, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(7263..8129)
DNA (867bp) protein (289aa)
tktB; transketolase N-terminal domain protein (EC:2.2.1.1) Tax=RIFCSPLOWO2_01_FULL_OD1_Nomurabacteria_33_24_curated
Transketolase domain protein id=4790066 bin=GWC2_OD1_43_27 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
Transketolase protein
sw_6_scaffold_3806_11
GWE1_OD1_40_20, Parcubacteria, Bacteria

Not on your lists

comp(8226..8909)
DNA (684bp) protein (228aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1); K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] id=5803340 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase {ECO:0000313|EMBL:KKR52141.1}; TaxID=1618946 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE1_40_20.;"
sw_6_scaffold_3806_12
R_SM2F11_46_11, SM2F11, Bacteria

Not on your lists

comp(8930..9301)
DNA (372bp) protein (124aa)
hypothetical protein; K07023 putative hydrolases of HD superfamily Tax=RIFCSPHIGHO2_02_FULL_SM2F11_46_11_curated
metal dependent phosphohydrolase; K07023 putative hydrolases of HD superfamily id=5803513 bin=OD1_GWC2_34_28 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
sw_6_scaffold_3806_13
R_RIF_OD1_13_60_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(9252..9527)
DNA (276bp) protein (92aa)
metal dependent phosphohydrolase Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_13_60_25_curated
metal dependent phosphohydrolase; K07023 putative hydrolases of HD superfamily id=5803513 bin=OD1_GWC2_34_28 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
sw_6_scaffold_3806_14
RIFOXYD1_FULL_OD1_46_19_curated, Parcubacteria, Bacteria

Not on your lists

comp(9537..9776)
DNA (240bp) protein (80aa)
ribose-5-phosphate isomerase B; K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6] Tax=RIFOXYD1_FULL_OD1_46_19_curated
ribose-5-phosphate isomerase B; K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6] id=18314828 bin=Nanosalina tax=Nanosalina
ribose-5-phosphate isomerase B
Displaying 14 items

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