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sw_6_scaffold_4208

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_4208_1
R_OD1_Jorgensenbacteria_45_25b, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

3..497
DNA (495bp) protein (165aa)
putative Tyrosine recombinase xerD Tax=RIFCSPLOWO2_01_FULL_OD1_Jorgensenbacteria_45_25b_curated
Tyrosine recombinase XerC id=3544177 bin=GWA1_ZB2_49_26 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
hypothetical protein
sw_6_scaffold_4208_2
GWB1_OD1_44_7, Parcubacteria, Bacteria

Not on your lists

comp(515..1045)
DNA (531bp) protein (177aa)
N-terminal methylation Tax=GWB1_OD1_44_7
hypothetical protein id=5801751 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
general secretion pathway protein G
sw_6_scaffold_4208_3
unknown

Not on your lists

comp(1483..1623)
DNA (141bp) protein (47aa)

This feature has no annotations

sw_6_scaffold_4208_4
R_OD1_Kaiserbacteria_55_25, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists


2062..2346
DNA (285bp) protein (95aa)
rpmA; 50S ribosomal protein L27; K02899 large subunit ribosomal protein L27 Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_55_25_curated
50S ribosomal protein L25; K02899 large subunit ribosomal protein L27 id=5803508 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
50S ribosomal protein L27
sw_6_scaffold_4208_5
R_OD1_Nomurabacteria_38_19, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


comp(2544..2882)
DNA (339bp) protein (113aa)
50S ribosomal protein L9 n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QUK7_ACEAZ
rplI; 50S ribosomal protein L9; K02939 large subunit ribosomal protein L9 Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_38_19_curated
rplI; 50S ribosomal protein L9
sw_6_scaffold_4208_6
R_OD1_Campbellbacteria_35_12, Campbellbacteria, Parcubacteria, Bacteria

Not on your lists

comp(2889..4169)
DNA (1281bp) protein (427aa)
ctpA; carboxy-terminal-processing protease (EC:3.4.21.102); K03797 carboxyl-terminal processing protease [EC:3.4.21.102] Tax=RIFCSPLOWO2_02_OD1_Campbellbacteria_35_12_curated
ctpA; carboxy-terminal-processing protease; K03797 carboxyl-terminal processing protease [EC:3.4.21.102] id=5803506 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
sw_6_scaffold_4208_7
GWA2_OD1_50_10_part, Parcubacteria, Bacteria

Not on your lists

4339..4971
DNA (633bp) protein (211aa)
Cysteine--tRNA ligase Tax=GWA2_OD1_50_10_part
Cysteine--tRNA ligase id=1273302 bin=GWE1_ACD58_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_ACD58_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Replace with complete genome
cysteinyl-tRNA synthetase
sw_6_scaffold_4208_8
RBG_13_RIF_OD1_08_41_18_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

4943..5740
DNA (798bp) protein (266aa)
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=RBG_13_RIF_OD1_08_41_18_curated
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Mesotoga sp. PhosAc3 RepID=N1JUF5_9THEM
sw_6_scaffold_4208_9
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

Not on your lists

5740..6138
DNA (399bp) protein (133aa)
id=24396110 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
id=24396110 Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
sw_6_scaffold_4208_10
RHI_RIF_OD1_10_43_12b, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

6610..7731
DNA (1122bp) protein (374aa)
dnaB; replicative DNA helicase (EC:3.6.1.-) Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_10_43_12b_curated
replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12] id=5803503 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
primary replicative DNA helicase (EC:3.6.1.-)
Displaying 10 items

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