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sw_6_scaffold_672

Search features with annotation key words

Displaying items 1-30 of 35 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_672_1
RIFOXYC1_FULL_OD1_Adlerbacteria_48_26_curated, Adlerbacteria, Parcubacteria, Bacteria

Not on your lists

comp(2..607)
DNA (606bp) protein (202aa)
type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM Tax=RIFOXYC1_FULL_OD1_Adlerbacteria_48_26_curated
Type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM id=5803086 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
type IV pilus assembly protein PilM
sw_6_scaffold_672_2

Not on your lists

comp(636..1013)
DNA (378bp) protein (126aa)
Tfp pilus assembly protein ATPase PilM-like protein {ECO:0000313|EMBL:KKS36410.1}; TaxID=1618952 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_42_14.;"
Type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM id=5803086 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
sw_6_scaffold_672_3
GWA2_OD1_50_10_part, Parcubacteria, Bacteria

Not on your lists

1047..1697
DNA (651bp) protein (217aa)
Phosphoribosyltransferase n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8ADL6_THEID
Phosphoribosyltransferase Tax=GWA2_OD1_50_10_part
phosphoribosyltransferase
sw_6_scaffold_672_trna_1
unknown

Not on your lists

2643..2729
DNA (87bp)
transferRNA
sw_6_scaffold_672_4
GWC1_OP11_37_12, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(2849..3280)
DNA (432bp) protein (144aa)
Type II secretion system protein G Tax=GWC1_OP11_37_12
sw_6_scaffold_672_5
Methanoculleus marisnigri, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3383..4201
DNA (819bp) protein (273aa)
HhH-GPD family protein n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CW98_METMJ
HhH-GPD family protein
HhH-GPD family protein {ECO:0000313|EMBL:ABN57648.1}; TaxID=368407 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus.;" source="Methanoculleus m
sw_6_scaffold_672_6
R_RIF_OD1_11_45_35, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

4229..6373
DNA (2145bp) protein (715aa)
recG; ATP-dependent DNA helicase; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_45_35_curated
recG; ATP-dependent DNA helicase RecG (EC:3.6.1.-); K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] id=5803096 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
recG; DNA recombinase
sw_6_scaffold_672_trna_2
unknown

Not on your lists

6639..6713
DNA (75bp)
transferRNA
sw_6_scaffold_672_7
RifOxyC12_full_RIF_OD1_09_46_25_curated, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

comp(7012..9030)
DNA (2019bp) protein (673aa)
ATP-dependent metalloprotease FtsH (EC:3.6.4.3); K03798 cell division protease FtsH [EC:3.4.24.-] Tax=RifOxyC12_full_RIF_OD1_09_46_25_curated
ftsH; cell division protein FtsH; K03798 cell division protease FtsH [EC:3.4.24.-] id=5803103 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
ftsH; cell division protein FtsH (EC:3.4.24.-)
sw_6_scaffold_672_8
R_RIF_OD1_11_47_18, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

9098..9550
DNA (453bp) protein (151aa)
SsrA-binding protein n=1 Tax=Hippea maritima (strain ATCC 700847 / DSM 10411 / MH2) RepID=F2LWW2_HIPMA
ssrA-binding protein Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_47_18_curated
SsrA-binding protein
sw_6_scaffold_672_9
R_OD1_Nomurabacteria_33_24, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(10522..11091)
DNA (570bp) protein (190aa)
N-acetyltransferase GCN5 Tax=RIFCSPLOWO2_01_FULL_OD1_Nomurabacteria_33_24_curated
Acetyltransferase GNAT family protein id=2193174 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
GCN5-like N-acetyltransferase
sw_6_scaffold_672_10
unknown

Not on your lists

comp(11311..11439)
DNA (129bp) protein (43aa)

This feature has no annotations

sw_6_scaffold_672_11
GWB1_OP11_39_12, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(11581..12231)
DNA (651bp) protein (217aa)
anthranilate phosphoribosyltransferase (EC:2.4.2.18)
Anthranilate phosphoribosyltransferase n=1 Tax=Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) RepID=C9RE03_METVM
Anthranilate phosphoribosyltransferase {ECO:0000313|EMBL:KKR00894.1}; TaxID=1618574 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWB1_39_12.;"
sw_6_scaffold_672_12
R_OP11_Roizmanbacteria_37_12, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(12173..12667)
DNA (495bp) protein (165aa)
Anthranilate phosphoribosyltransferase n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T2P8_ROSHA
anthranilate phosphoribosyltransferase Tax=RIFCSPLOWO2_01_FULL_OP11_Roizmanbacteria_37_12_curated
anthranilate phosphoribosyltransferase
sw_6_scaffold_672_13

Not on your lists

14263..15240
DNA (978bp) protein (326aa)
dacB1; D-alanyl-D-alanine carboxypeptidase DacB (EC:3.4.16.4)
Capsule synthesis protein, CapA {ECO:0000313|EMBL:KKW24519.1}; TaxID=1618917 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_51_35.;"
Protein containing Peptidase S11, D-alanyl-D-alanine carboxypeptidase A domain id=3544701 bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
sw_6_scaffold_672_14
GWA1_OD1_40_21, Parcubacteria, Bacteria

Not on your lists

15302..15808
DNA (507bp) protein (169aa)
Translation initiation factor IF-3 Tax=GWA1_OD1_40_21
translation initiation factor IF-3; K02520 translation initiation factor IF-3 id=5803010 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
infC; translation initiation factor IF-3
sw_6_scaffold_672_15
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists


15823..16017
DNA (195bp) protein (65aa)
50S ribosomal protein L35 {ECO:0000313|EMBL:KKS72426.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
sw_6_scaffold_672_16
R_OD1_39_11, Parcubacteria, Bacteria

Not on your lists


16186..16530
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=candidate division OD1 bacterium SCGC AAA011-G05 RepID=UPI000363702F
rplT; 50S ribosomal protein L20; K02887 large subunit ribosomal protein L20 Tax=RIFCSPLOWO2_01_FULL_OD1_39_11_curated
50S ribosomal protein L20
sw_6_scaffold_672_17
unknown

Not on your lists

comp(17019..17399)
DNA (381bp) protein (127aa)

This feature has no annotations

sw_6_scaffold_672_18
GWA1_OD1_47_8, Parcubacteria, Bacteria

Not on your lists

comp(17412..17882)
DNA (471bp) protein (157aa)
nucleoside-diphosphate kinase (EC:2.7.4.6); K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] id=53687 bin=ACD41 species=ACD41 genus=ACD41 taxon_order=ACD41 taxon_class=ACD41 phylum=OD1 tax=ACD41 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Nucleoside-diphosphate kinase Tax=GWA1_OD1_47_8
nucleoside diphosphate kinase
sw_6_scaffold_672_19
Oryctolagus cuniculus, Oryctolagus, Lagomorpha, Mammalia, Chordata, Metazoa

Not on your lists

comp(17958..18893)
DNA (936bp) protein (312aa)
Dentin sialophosphoprotein {ECO:0000313|EMBL:ACN91294.1}; Flags: Fragment;; TaxID=9986 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires;
sw_6_scaffold_672_20
unknown

Not on your lists

comp(18929..20221)
DNA (1293bp) protein (431aa)

This feature has no annotations

sw_6_scaffold_672_21
unknown

Not on your lists

comp(20208..20417)
DNA (210bp) protein (70aa)

This feature has no annotations

sw_6_scaffold_672_22
GWA1_OD1_40_21, Parcubacteria, Bacteria

Not on your lists

comp(20439..23225)
DNA (2787bp) protein (929aa)
Putative uncharacterized protein Tax=GWA1_OD1_40_21
id=5227330 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
hypothetical protein
sw_6_scaffold_672_23
unknown

Not on your lists

comp(23287..23778)
DNA (492bp) protein (164aa)

This feature has no annotations

sw_6_scaffold_672_24
unknown

Not on your lists

comp(23720..27511)
DNA (3792bp) protein (1264aa)

This feature has no annotations

sw_6_scaffold_672_25
unknown

Not on your lists

comp(27558..28883)
DNA (1326bp) protein (442aa)

This feature has no annotations

sw_6_scaffold_672_26
unknown

Not on your lists

comp(28904..31030)
DNA (2127bp) protein (709aa)

This feature has no annotations

sw_6_scaffold_672_27
GWA2_OD1_49_9, Parcubacteria, Bacteria

Not on your lists

comp(31153..31920)
DNA (768bp) protein (256aa)
methionine aminopeptidase (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18] id=5803017 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Methionine aminopeptidase {ECO:0000313|EMBL:KKW11038.1}; TaxID=1618852 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_49_9.;"
map; methionyl aminopeptidase
sw_6_scaffold_672_28
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(31917..32618)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FEM9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKR79588.1}; TaxID=1618734 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_40_9.;"
putative uridylate kinase
Displaying items 1-30 of 35 in total

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