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sw_6_scaffold_897

Search features with annotation key words

Displaying 23 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_897_1
Cardiobacterium valvarum, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..176
DNA (174bp) protein (58aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleB
Triosephosphate isomerase n=1 Tax=Cardiobacterium valvarum F0432 RepID=G9ZGE8_9GAMM
sw_6_scaffold_897_2
R_OD1_Campbellbacteria_35_11, Campbellbacteria, Parcubacteria, Bacteria

Not on your lists

163..1299
DNA (1137bp) protein (379aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3) Tax=RIFCSPLOWO2_02_FULL_OD1_Campbellbacteria_35_11_curated
pgk; phosphoglycerate kinase (EC:2.7.2.3); K00927 phosphoglycerate kinase [EC:2.7.2.3] id=5803116 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
phosphoglycerate kinase (EC:2.7.2.3)
sw_6_scaffold_897_3
unknown

Not on your lists

1416..1679
DNA (264bp) protein (88aa)

This feature has no annotations

sw_6_scaffold_897_4
R_RIF_OD1_09_49_22, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

comp(1722..2138)
DNA (417bp) protein (139aa)
Histidine triad family protein (Homolog to bis(5'-nucleosyl)-tetraphosphatase) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y085_NATM8
Histidine triad (HIT) protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_09_49_22_curated
hit2; histidine triad family protein (homolog to bis(5'-nucleosyl)-tetraphosphatase)
sw_6_scaffold_897_5
unknown

Not on your lists

3401..4618
DNA (1218bp) protein (406aa)

This feature has no annotations

sw_6_scaffold_897_6
unknown

Not on your lists

4707..5999
DNA (1293bp) protein (431aa)

This feature has no annotations

sw_6_scaffold_897_7
RHI_RIF_OD1_10_44_12b, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

6060..7706
DNA (1647bp) protein (549aa)
single-stranded-DNA-specific exonuclease RecJ; K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_10_44_12b_curated
single-stranded-DNA-specific exonuclease recJ (EC:3.1.-.-); K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] id=5803114 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Single-stranded-DNA-specific exonuclease RecJ (EC:3.1.-.-)
sw_6_scaffold_897_8
Parcubacteria bacterium GW2011_GWF2_50_9, Parcubacteria, Bacteria

Not on your lists

7908..8501
DNA (594bp) protein (198aa)
Ribonuclease H {ECO:0000313|EMBL:KKW19154.1}; TaxID=1618975 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_50_9.;"
Ribonuclease H id=3859861 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
ribonuclease H
sw_6_scaffold_897_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10129..10956
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SFG0_RHOMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY47707.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
sw_6_scaffold_897_10

Not on your lists

11041..11916
DNA (876bp) protein (292aa)
ComEC/Rec2 family protein {ECO:0000313|EMBL:KKR47457.1}; TaxID=1618815 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_143.;"
DNA internalization-like competence protein ComEC/Rec2; K02238 competence protein ComEC id=5803006 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
s-layer protein
sw_6_scaffold_897_11
unknown

Not on your lists

11997..12416
DNA (420bp) protein (140aa)

This feature has no annotations

sw_6_scaffold_897_12
R_OD1_Adlerbacteria_54_23, Adlerbacteria, Parcubacteria, Bacteria

Not on your lists


comp(12507..12755)
DNA (249bp) protein (83aa)
rpmB; 50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 Tax=RIFCSPHIGHO2_01_FULL_OD1_Adlerbacteria_54_23_curated
rpmB; 50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 id=5803004 bin=OD1_GWC2_34_28 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
sw_6_scaffold_897_13
GWA1_OD1_51_14_curated, Parcubacteria, Bacteria

Not on your lists

12849..13490
DNA (642bp) protein (214aa)
hypothetical protein Tax=GWA1_OD1_51_14_curated
Peptidase M50 id=3423315 bin=GWA1_ZB2_49_26 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
peptidase M50
sw_6_scaffold_897_14
R_OD1_Kaiserbacteria_54_22, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists


13572..13979
DNA (408bp) protein (136aa)
30S ribosomal protein S12 n=1 Tax=Parcubacteria bacterium SCGC AAA040-L21 RepID=UPI00037AA193
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_54_22_curated
rpsL; 30S ribosomal protein S12
sw_6_scaffold_897_15
RBG_13_OD1_Falkowbacteria_36_9_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists


14115..14588
DNA (474bp) protein (158aa)
30S ribosomal protein S7 Tax=RBG_13_OD1_Falkowbacteria_36_9_curated
30S ribosomal protein S7; K02992 small subunit ribosomal protein S7 id=5803001 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rpsG; 30S ribosomal protein S7
sw_6_scaffold_897_16
unknown

Not on your lists

14646..14873
DNA (228bp) protein (76aa)

This feature has no annotations

sw_6_scaffold_897_17
unknown

Not on your lists

comp(14796..15140)
DNA (345bp) protein (115aa)

This feature has no annotations

sw_6_scaffold_897_18
R_OD1_Uhrbacteria_54_11, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(15293..16264)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I0K9_CALAS
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_OD1_Uhrbacteria_54_11_curated
hypothetical protein
sw_6_scaffold_897_19
unknown

Not on your lists

16417..16617
DNA (201bp) protein (67aa)

This feature has no annotations

sw_6_scaffold_897_20
R_OD1_Campbellbacteria_35_12, Campbellbacteria, Parcubacteria, Bacteria

Not on your lists

16621..18771
DNA (2151bp) protein (717aa)
translation elongation factor 2 (EF-2/EF-G); K02355 elongation factor G Tax=RIFCSPLOWO2_02_OD1_Campbellbacteria_35_12_curated
fusA-3; elongation factor G; K02355 elongation factor G id=5802997 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
translation elongation factor 2 (EF-2/EF-G)
sw_6_scaffold_897_21
R_OD1_53_13, Parcubacteria, Bacteria

Not on your lists

19100..19822
DNA (723bp) protein (241aa)
Predicted glutamine amidotransferases Tax=RIFCSPLOWO2_01_FULL_OD1_53_13_curated
peptidase C26; K07010 putative glutamine amidotransferase id=72918 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
glutamine amidotransferase
sw_6_scaffold_897_22
unknown

Not on your lists

19976..20371
DNA (396bp) protein (132aa)

This feature has no annotations

sw_6_scaffold_897_23
unknown

Not on your lists

20570..21061
DNA (492bp) protein (164aa)

This feature has no annotations

Displaying 23 items

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