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RifSed_csp2_19ft_3_scaffold_8081

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_19ft_3_scaffold_8081_1
R_OP11_Gottesmanbacteria_39_12b, Gottesmanbacteria, Microgenomates, Bacteria

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comp(2..1783)
DNA (1782bp) protein (594aa)
dly:Dehly_1035 valyl-tRNA synthetase; K01873 valyl-tRNA synthetase [EC:6.1.1.9] id=1242200 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
valyl-tRNA synthetase
Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_39_12b_curated
RifSed_csp2_19ft_3_scaffold_8081_2
RBG_19FT_COMBO_OP11_39_10_curated, Microgenomates, Bacteria

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comp(2023..2940)
DNA (918bp) protein (306aa)
O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=uncultured bacterium RepID=K2A9N8_9BACT
Tax=RBG_19FT_COMBO_OP11_39_10_curated
RifSed_csp2_19ft_3_scaffold_8081_3
GWB1_OP11_38_8, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(2937..4775)
DNA (1839bp) protein (613aa)
VanW family protein n=1 Tax=uncultured bacterium RepID=K2EUQ2_9BACT
VanW family protein {ECO:0000313|EMBL:KKQ85577.1}; TaxID=1618570 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWB1_38_8.;"
VanW family protein
RifSed_csp2_19ft_3_scaffold_8081_4
R_RIF_OP11_03_50_28, RIF-OP11-3, Microgenomates, Bacteria

Not on your lists

4844..6328
DNA (1485bp) protein (495aa)
Lmo0768 protein n=45 Tax=Listeria RepID=Q8Y8X4_LISMO id=5086801 bin=GWF1_OP11_31_35_complete species=unknown genus=Listeria taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF1_OP11_31_35_complete organism_group=OP11 (Microgenomates) organism_desc=Complete genome (was OP11_1)
family 1 extracellular solute-binding protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_50_28_curated
RifSed_csp2_19ft_3_scaffold_8081_5
RBG_16_OP11_Curtissbacteria_39_7_curated, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

6325..6996
DNA (672bp) protein (224aa)
hypothetical protein id=85168 bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RBG_16_OP11_Curtissbacteria_39_7_curated
RifSed_csp2_19ft_3_scaffold_8081_6
unknown

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6993..7211
DNA (219bp) protein (73aa)

This feature has no annotations

RifSed_csp2_19ft_3_scaffold_8081_7

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comp(7171..9261)
DNA (2091bp) protein (697aa)
hau:Haur_3225 1A family penicillin-binding protein id=84992 bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:EKD57317.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
RifSed_csp2_19ft_3_scaffold_8081_8
unknown

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9310..9573
DNA (264bp) protein (88aa)

This feature has no annotations

RifSed_csp2_19ft_3_scaffold_8081_9
R_OP11_43_14, Microgenomates, Bacteria

Not on your lists

9667..10131
DNA (465bp) protein (155aa)
nrdR; transcriptional regulator NrdR; K07738 transcriptional repressor NrdR id=28395 bin=ACD24 species=ACD24 genus=ACD24 taxon_order=ACD24 taxon_class=ACD24 phylum=WWE3 tax=ACD24 organism_group=WWE3 organism_desc=WWE3
Transcriptional repressor NrdR
Tax=RIFCSPLOWO2_01_FULL_OP11_43_14_curated
RifSed_csp2_19ft_3_scaffold_8081_10
RBG_16_OP11_Woesebacteria_36_11_curated, Woesebacteria, Microgenomates, Bacteria

Not on your lists

10156..12396
DNA (2241bp) protein (747aa)
oxygen-sensitive ribonucleoside-triphosphate reductase; K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] id=5803469 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Ribonucleoside-triphosphate reductase
Tax=RBG_16_OP11_Woesebacteria_36_11_curated
RifSed_csp2_19ft_3_scaffold_8081_11
R_OP11_Gottesmanbacteria_39_12b, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

12577..13134
DNA (558bp) protein (186aa)
hypothetical protein Magn03002348 n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000382B52 id=125592 bin=ACD79 species=Magnetospirillum magnetotacticum genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_39_12b_curated
RifSed_csp2_19ft_3_scaffold_8081_12
GWA2_OP11_nov_42_16, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

13162..13500
DNA (339bp) protein (113aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS41846.1}; TaxID=1618441 species="Bacteria; Microgenomates.;" source="Microgenomates (Gottesmanbacteria) bacterium GW2011_GWA2_42_16.;"
RifSed_csp2_19ft_3_scaffold_8081_13
R_RIF_OP11_03_48_12, RIF-OP11-3, Microgenomates, Bacteria

Not on your lists

13497..15707
DNA (2211bp) protein (737aa)
hypothetical protein id=15190989 bin=GWC1_OP11_49_16_COMPLETE species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_RIF_OP11_03_48_12_curated
RifSed_csp2_19ft_3_scaffold_8081_trna_1
unknown

Not on your lists

15755..15826
DNA (72bp)
transferRNA Ile
RifSed_csp2_19ft_3_scaffold_8081_14
R_OP11_Gottesmanbacteria_39_10, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(15902..16765)
DNA (864bp) protein (288aa)
xerC; site-specific tyrosine recombinase XerC; K03733 integrase/recombinase XerC id=5084526 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Gottesmanbacteria_39_10_curated
RifSed_csp2_19ft_3_scaffold_8081_15
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

16847..17230
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2A9L0_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
RifSed_csp2_19ft_3_scaffold_8081_16
R_OP11_Curtissbacteria_41_11, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

17234..17857
DNA (624bp) protein (208aa)
rnhB; ribonuclease HII; K03470 ribonuclease HII [EC:3.1.26.4] id=85932 bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
RNase HII (EC:3.1.26.4)
Tax=RIFCSPLOWO2_02_OP11_Curtissbacteria_41_11_curated
RifSed_csp2_19ft_3_scaffold_8081_17
unknown

Not on your lists

comp(17854..18024)
DNA (171bp) protein (57aa)

This feature has no annotations

RifSed_csp2_19ft_3_scaffold_8081_18
R_OD1_53_13, Parcubacteria, Bacteria

Not on your lists

comp(18008..18283)
DNA (276bp) protein (92aa)
MazG nucleotide pyrophosphohydrolase id=72187 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
pyrophosphatase
Tax=RIFCSPLOWO2_01_FULL_OD1_53_13_curated
RifSed_csp2_19ft_3_scaffold_8081_trna_3
unknown

Not on your lists

comp(18352..18424)
DNA (73bp)
transferRNA Met
RifSed_csp2_19ft_3_scaffold_8081_trna_2
unknown

Not on your lists

comp(18487..18558)
DNA (72bp)
transferRNA Met
RifSed_csp2_19ft_3_scaffold_8081_19
RHI_OP11_Levybacteria_38_12, Levybacteria, Microgenomates, Bacteria

Not on your lists

18804..19694
DNA (891bp) protein (297aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophanyl-tRNA synthetase id=2117245 bin=GWE2_CPR3_35_7 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=GWE2_CPR3_35_7 organism_group=CPR3 organism_desc=Good
Tax=RIFCSPHIGHO2_12_FULL_OP11_Levybacteria_38_12_curated
RifSed_csp2_19ft_3_scaffold_8081_20
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists


19756..20088
DNA (333bp) protein (111aa)
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=SYM_ARCFU
Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
RifSed_csp2_19ft_3_scaffold_8081_21
R_RIF_OP11_03_49_14, RIF-OP11-3, Microgenomates, Bacteria

Not on your lists

20110..21009
DNA (900bp) protein (300aa)
ATP-dependent metalloprotease FtsH (EC:3.6.4.3); K03798 cell division protease FtsH [EC:3.4.24.-] id=5084612 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
ftsH; cell division protease (EC:3.4.24.-)
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated
RifSed_csp2_19ft_3_scaffold_8081_22
RBG_16_OP11_43_9_curated, Microgenomates, Bacteria

Not on your lists

21018..21854
DNA (837bp) protein (279aa)
ATP-dependent metalloprotease FtsH (EC:3.6.4.3); K03798 cell division protease FtsH [EC:3.4.24.-] id=5084612 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
hypothetical protein
Tax=RBG_16_OP11_43_9_curated
RifSed_csp2_19ft_3_scaffold_8081_23

Not on your lists

21863..22774
DNA (912bp) protein (304aa)
aoe:Clos_1206 DNA polymerase I (EC:2.7.7.7); K02335 DNA polymerase I [EC:2.7.7.7] id=9147 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
DNA polymerase I (EC:2.7.7.7)
Uncharacterized protein {ECO:0000313|EMBL:EKE10826.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
RifSed_csp2_19ft_3_scaffold_8081_24
CG_CPR15_01, CG_CPR15, Bacteria

Not on your lists

22771..23220
DNA (450bp) protein (150aa)
Glycosyl transferase group 1 id=2837657 bin=GWF2_CPR3_35_18 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWF2_CPR3_35_18 organism_group=CPR3
hypothetical protein
Tax=CG_CPR15_01
Displaying 27 items

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