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RifSed_csp2_19ft_3_scaffold_7041

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp2_19ft_3_scaffold_7041_1
RBG_19FT_COMBO_OP11_39_10_curated, Microgenomates, Bacteria

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comp(2..349)
DNA (348bp) protein (116aa)
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta id=3006310 bin=GWC1_CPR2_39_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
Tax=RBG_19FT_COMBO_OP11_39_10_curated
RifSed_csp2_19ft_3_scaffold_7041_2
R_OP11_Daviesbacteria_41_45, Daviesbacteria, Microgenomates, Bacteria

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comp(346..801)
DNA (456bp) protein (152aa)
seg 6..18 id=36108 bin=ACD30 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RIFCSPHIGHO2_01_FULL_OP11_Daviesbacteria_41_45_curated
RifSed_csp2_19ft_3_scaffold_7041_3
RIFOXYB1_FULL_OP11_Woesebacteria_47_31_curated, Woesebacteria, Microgenomates, Bacteria

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comp(1054..1362)
DNA (309bp) protein (103aa)
chromosomal replication initiator protein DnaA; K02313 chromosomal replication initiator protein id=5084574 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
dnaA; chromosomal replication initiator protein DnaA
Tax=RIFOXYB1_FULL_OP11_Woesebacteria_47_31_curated
RifSed_csp2_19ft_3_scaffold_7041_4
R_RIF_OP11_01_43_15b, RIF-OP11-1, Microgenomates, Bacteria

Not on your lists

comp(1359..2381)
DNA (1023bp) protein (341aa)
ttr:Tter_0001 chromosomal replication initiator protein DnaA; K02313 chromosomal replication initiator protein id=6997 bin=ACD13 species=ACD13 genus=ACD13 taxon_order=ACD13 taxon_class=ACD13 phylum=OP11 tax=ACD13 organism_group=OP11 (Microgenomates) organism_desc=OP11
chromosomal replication initiation protein
Tax=RIFCSPHIGHO2_01_FULL_RIF_OP11_01_43_15b_curated
RifSed_csp2_19ft_3_scaffold_7041_5
unknown

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2674..3009
DNA (336bp) protein (112aa)

This feature has no annotations

RifSed_csp2_19ft_3_scaffold_7041_6
Leptotrichia goodfellowii, Leptotrichia, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

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3006..3245
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Latescibacteria bacterium SCGC AAA252-D10 RepID=UPI000369BD60
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=596323 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Leptotrichia.;" source="Leptotrichia goodfellowii F0264.;"
hypothetical protein
RifSed_csp2_19ft_3_scaffold_7041_7
R_RIF_OP11_03_50_28, RIF-OP11-3, Microgenomates, Bacteria

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3249..3980
DNA (732bp) protein (244aa)
Membrane protein insertase, YidC/Oxa1 family id=4095139 bin=GWF2_CPR3_35_18 species=ACD40 genus=ACD40 taxon_order=ACD40 taxon_class=ACD40 phylum=OP11 tax=GWF2_CPR3_35_18 organism_group=CPR3
60 kDa inner membrane insertion protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_50_28_curated
RifSed_csp2_19ft_3_scaffold_7041_8
GWC2_OP11_40_7_plus, Levybacteria, Microgenomates, Bacteria

Not on your lists

4335..5552
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DVT9_9BACT
O-antigen ligase-related protein {ECO:0000313|EMBL:KKR72155.1}; TaxID=1618468 species="Bacteria; Microgenomates.;" source="Microgenomates (Levybacteria) bacterium GW2011_GWC2_40_7.;"
RifSed_csp2_19ft_3_scaffold_7041_9
GWA1_OP11_ACD12_44_24, Gottesmanbacteria, Microgenomates, Bacteria

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5533..6792
DNA (1260bp) protein (420aa)
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:KKT59912.1}; TaxID=1618437 species="Bacteria; Microgenomates.;" source="Microgenomates (Gottesmanbacteria) bacterium GW2011_GWA1_44_24b.;"
succinoglycan biosynthesis transport protein id=85340 bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
Membrane protein involved in the export of O-antigen and teichoic acid
RifSed_csp2_19ft_3_scaffold_7041_10
R_OP11_Daviesbacteria_39_12, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

6859..7284
DNA (426bp) protein (142aa)
Ribonuclease HI n=1 Tax=Elusimicrobium minutum (strain Pei191) RepID=B2KDX8_ELUMP
ribonuclease HI
Tax=RIFCSPHIGHO2_02_FULL_OP11_Daviesbacteria_39_12_curated
RifSed_csp2_19ft_3_scaffold_7041_11
CG_Beckwith_01, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

7323..10343
DNA (3021bp) protein (1007aa)
nucleoside-diphosphate-sugar epimerase id=15190840 bin=GWC1_OP11_49_16_COMPLETE species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) rbh
GDP-mannose 4,6 dehydratase ISS
Tax=CG_Beckwith_01
RifSed_csp2_19ft_3_scaffold_7041_12
R_OP11_Curtissbacteria_42_26, Curtissbacteria, Microgenomates, Bacteria

Not on your lists


10399..11121
DNA (723bp) protein (241aa)
ctc; 50S ribosomal protein L25; K02897 large subunit ribosomal protein L25 id=15190839 bin=GWC1_OP11_49_16_COMPLETE species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OP11_Curtissbacteria_42_26_curated
RifSed_csp2_19ft_3_scaffold_7041_13
R_OP11_43_14, Microgenomates, Bacteria

Not on your lists

comp(11135..11650)
DNA (516bp) protein (172aa)
Tax=RIFCSPLOWO2_01_FULL_OP11_43_14_curated
RifSed_csp2_19ft_3_scaffold_7041_14
RBG_13_OP11_Beckwithbacteria_35_6_curated, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists


comp(11628..12629)
DNA (1002bp) protein (334aa)
Valine--tRNA ligase n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P9P7_9FIRM
valS; valyl-tRNA synthetase
Tax=RBG_13_OP11_Beckwithbacteria_35_6_curated
Displaying 14 items

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