ggKbase home page

CG08_land_8_20_14_0.20_scaffold_39_c

Search features with annotation key words

Displaying items 1-30 of 138 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CG08_land_8_20_14_0.20_scaffold_39_c_1
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

3..281
DNA (279bp) protein (93aa)
Uncharacterized protein Tax=Capnocytophaga sp. CM59 RepID=J5X4W9_9FLAO
Tax=CG_CPR12_01
CG08_land_8_20_14_0.20_scaffold_39_c_2
unknown

Not on your lists

comp(310..540)
DNA (231bp) protein (77aa)

This feature has no annotations

CG08_land_8_20_14_0.20_scaffold_39_c_3
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(636..1739)
DNA (1104bp) protein (368aa)
Glycosyltransferase bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
group 1 glycosyl transferase
Tax=CG_CPR12_01
CG08_land_8_20_14_0.20_scaffold_39_c_4
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(1736..2737)
DNA (1002bp) protein (334aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037AA396
Tax=CG_CPR12_01
CG08_land_8_20_14_0.20_scaffold_39_c_5
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(2861..3253)
DNA (393bp) protein (131aa)
hypothetical protein Tax=Thioalkalivibrio sp. ALJ24 RepID=UPI00038080DC
Tax=CG_CPR12_01
CG08_land_8_20_14_0.20_scaffold_39_c_6
RIFOXYC1_FULL_RIF_OD1_03_37_11_curated, RIF-OD1-3, Parcubacteria, Bacteria

Not on your lists

comp(3330..3482)
DNA (153bp) protein (51aa)
Tax=RIFOXYC1_FULL_RIF_OD1_03_37_11_curated
CG08_land_8_20_14_0.20_scaffold_39_c_7
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(3492..4061)
DNA (570bp) protein (190aa)
Phospholipid-binding protein, PBP family bin=GWD2_Desulfuromonadales_54_10 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
PEBP family protein
Tax=CG_CPR12_01
CG08_land_8_20_14_0.20_scaffold_39_c_8
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(4174..4434)
DNA (261bp) protein (87aa)
Tax=CG_CPR12_01
CG08_land_8_20_14_0.20_scaffold_39_c_9
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(4446..4982)
DNA (537bp) protein (179aa)
id=5084712 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
hypothetical protein
Tax=CG_CPR12_01
CG08_land_8_20_14_0.20_scaffold_39_c_10
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(5039..5602)
DNA (564bp) protein (188aa)
Metal-dependent hydrolase Tax=uncultured bacterium RepID=K2FGU7_9BACT
Predicted metal-dependent hydrolase
Tax=CG_CPR12_01
CG08_land_8_20_14_0.20_scaffold_39_c_11
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

5923..6351
DNA (429bp) protein (143aa)
Uncharacterized protein Tax=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) RepID=Q72H14_THET2
hypothetical protein
Tax=CG_CPR12_01
CG08_land_8_20_14_0.20_scaffold_39_c_12
unknown

Not on your lists

6402..6557
DNA (156bp) protein (52aa)

This feature has no annotations

CG08_land_8_20_14_0.20_scaffold_39_c_13
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(6698..7384)
DNA (687bp) protein (229aa)
Putative uncharacterized protein bin=GWF2_OP3_43_52 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein
Tax=CG_CPR12_01
CG08_land_8_20_14_0.20_scaffold_39_c_14
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(7386..7613)
DNA (228bp) protein (76aa)
Putative uncharacterized protein bin=GWA1_ZB2_49_26 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
hypothetical protein
Tax=CG_CPR12_01
CG08_land_8_20_14_0.20_scaffold_39_c_15
RIFOXYC1_FULL_RIF_OD1_03_37_11_curated, RIF-OD1-3, Parcubacteria, Bacteria

Not on your lists

comp(7620..7712)
DNA (93bp) protein (31aa)
Tax=RIFOXYC1_FULL_RIF_OD1_03_37_11_curated
CG08_land_8_20_14_0.20_scaffold_39_c_trna_2
unknown

Not on your lists

comp(7775..7846)
DNA (72bp)
transferRNA Glu
CG08_land_8_20_14_0.20_scaffold_39_c_16
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(7942..9219)
DNA (1278bp) protein (426aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
Tax=CG_CPR12_01
CG08_land_8_20_14_0.20_scaffold_39_c_17
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(9351..11084)
DNA (1734bp) protein (578aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Uncharacterized protein Tax=uncultured bacterium RepID=K1XQY9_9BACT
Tax=CG_CPR12_01
CG08_land_8_20_14_0.20_scaffold_39_c_18
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(11152..11505)
DNA (354bp) protein (118aa)
Tax=CG_CPR12_01
CG08_land_8_20_14_0.20_scaffold_39_c_19
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(11509..12447)
DNA (939bp) protein (313aa)
Ribosomal RNA small subunit methyltransferase H Tax=Heliobacterium modesticaldum (strain ATCC 51547 / Ice1) RepID=RSMH_HELMI
mraW; S-adenosyl-methyltransferase MraW
Tax=CG_CPR12_01
CG08_land_8_20_14_0.20_scaffold_39_c_20
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(12444..12875)
DNA (432bp) protein (144aa)
MraZ protein; K03925 MraZ protein bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
hypothetical protein
Tax=CG_CPR12_01
CG08_land_8_20_14_0.20_scaffold_39_c_21
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(13403..13873)
DNA (471bp) protein (157aa)
Peptidase M22 glycoprotease Tax=Bacillus cellulosilyticus (strain ATCC 21833 / DSM 2522 / FERM P-1141 / JCM 9156 / N-4) RepID=E6TVT5_BACCJ
peptidase M22 glycoprotease
Tax=CG_CPR12_01
CG08_land_8_20_14_0.20_scaffold_39_c_22
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(13860..14315)
DNA (456bp) protein (152aa)
Haloacid dehalogenase domain protein hydrolase Tax=Nitrosomonas eutropha (strain C91) RepID=Q0AIW3_NITEC
hydrolase
Tax=CG_CPR12_01
CG08_land_8_20_14_0.20_scaffold_39_c_23
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(14293..14937)
DNA (645bp) protein (215aa)
probable transcriptional regulator Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B25B3 bin=ACD18 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
Tax=CG_CPR12_01
CG08_land_8_20_14_0.20_scaffold_39_c_24
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

15021..17069
DNA (2049bp) protein (683aa)
Tax=CG_CPR12_01
CG08_land_8_20_14_0.20_scaffold_39_c_25
unknown

Not on your lists

comp(17165..17425)
DNA (261bp) protein (87aa)

This feature has no annotations

CG08_land_8_20_14_0.20_scaffold_39_c_26
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists


comp(17723..18139)
DNA (417bp) protein (139aa)
50S ribosomal protein L7/L12 Tax=Clostridiales RepID=D5HE43_9FIRM bin=ACD41 species=unknown genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD41 organism_group=OD1 (Parcubacteria) organism_desc=OD1
rplL; 50S ribosomal protein L7/L12
Tax=CG_CPR12_01
CG08_land_8_20_14_0.20_scaffold_39_c_27
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists


comp(18162..18686)
DNA (525bp) protein (175aa)
ribosomal protein L10; K02864 large subunit ribosomal protein L10 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
50S ribosomal protein L10
Tax=CG_CPR12_01
CG08_land_8_20_14_0.20_scaffold_39_c_28
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

18969..19253
DNA (285bp) protein (95aa)
Uncharacterized protein bin=GWF2_Planctomycetes_50_10 species=Phycisphaera mikurensis genus=Phycisphaera taxon_order=Phycisphaerales taxon_class=Phycisphaerae phylum=Planctomycetes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes
hypothetical protein
Tax=CG_CPR12_01
CG08_land_8_20_14_0.20_scaffold_39_c_29
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(19313..19993)
DNA (681bp) protein (227aa)
putative uridylate kinase; K09903 uridylate kinase [EC:2.7.4.22] bin=GWC1_OP11_49_16_COMPLETE species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
uridylate kinase
Tax=CG_CPR12_01
Displaying items 1-30 of 138 in total

View Taxonomy