ggKbase home page

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2861_c

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2861_c_trna_1
unknown

Not on your lists

comp(94..165)
DNA (72bp)
transferRNA Arg
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2861_c_1
GWA1_OD1_48_13, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(541..1635)
DNA (1095bp) protein (365aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU94520.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWA1_48_13.;"
alias=gwe2_scaffold_421_29 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2861_c_2
GWA1_OD1_48_11, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(1737..2045)
DNA (309bp) protein (103aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU91549.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWA1_48_11.;"
elongation factor Tu domain 2 protein bin=bin11_novelCP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin11_novelCP organism_group=Unknown_CP
Translation elongation factor-like protein
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2861_c_3
GWA1_OD1_48_11, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(2142..2762)
DNA (621bp) protein (207aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU91550.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWA1_48_11.;"
Putative uncharacterized protein bin=GWC2_OD1_43_27 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
hypothetical protein
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2861_c_4
GWA1_OD1_48_11, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(2946..3776)
DNA (831bp) protein (277aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1X1P9_9BACT
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:KKU91551.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWA1_48_11.;"
RNA-metabolising metallo-beta-lactamase
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2861_c_5
unknown

Not on your lists

3969..4223
DNA (255bp) protein (85aa)

This feature has no annotations

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2861_c_6
GWA1_OD1_48_11, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(4460..5704)
DNA (1245bp) protein (415aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2, 6-diaminopimelate ligase {ECO:0000313|EMBL:KKU91552.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWA1_48_11.;"
UDP-N-acetylmuramyl-tripeptide synthetase bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
UDP-N-acetylmuramyl tripeptide synthetase
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2861_c_7
GWA1_OD1_48_11, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(5724..6305)
DNA (582bp) protein (194aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000313|EMBL:KKU91553.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWA1_48_11.;"
Holliday junction ATP-dependent DNA helicase RuvA bin=GWC2_OD1_43_27 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
Holliday junction DNA helicase RuvA
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2861_c_8
GWC1_OD1_48_8_partial, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists


6593..6853
DNA (261bp) protein (87aa)
30S ribosomal protein S20 {ECO:0000313|EMBL:KKU98942.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWC1_48_8.;"
30S ribosomal protein S20; K02968 small subunit ribosomal protein S20 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
rpsT; 30S ribosomal protein S20
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2861_c_9
unknown

Not on your lists

6925..7023
DNA (99bp) protein (33aa)

This feature has no annotations

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2861_c_10
GWA1_OD1_49_17_curated, Parcubacteria, Bacteria

Not on your lists

comp(7123..8100)
DNA (978bp) protein (326aa)
Tax=GWA1_OD1_49_17_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2861_c_11
unknown

Not on your lists

comp(8270..8662)
DNA (393bp) protein (131aa)

This feature has no annotations

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2861_c_12
GWA1_OD1_48_13, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

8985..10658
DNA (1674bp) protein (558aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1X1P5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKU94511.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWA1_48_13.;"
type II secretion system protein E
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2861_c_13
GWA1_OD1_49_17_curated, Parcubacteria, Bacteria

Not on your lists

11264..12283
DNA (1020bp) protein (340aa)
ruvB; holliday junction DNA helicase RuvB (EC:3.6.1.-); K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
Holliday junction DNA helicase RuvB
Tax=GWA1_OD1_49_17_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2861_c_14
R_OD1_Wolfebacteria_44_18, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

12283..12852
DNA (570bp) protein (190aa)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003737F3B
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_Wolfebacteria_44_18_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2861_c_15
GWA1_OD1_48_13, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

13241..13531
DNA (291bp) protein (97aa)
Transcriptional regulator {ECO:0000313|EMBL:KKU94508.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWA1_48_13.;"
HTH ArsR-type DNA-binding domain bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
transcriptional regulator
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2861_c_16
GWB1_OD1_49_9, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

13538..15958
DNA (2421bp) protein (807aa)
DNA polymerase I (EC:2.7.7.7)
DNA polymerase Tax=uncultured bacterium RepID=C3U0N4_9BACT
Polymerase protein {ECO:0000313|EMBL:KKW12053.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWB1_49_9.;"
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2861_c_17
GWA2_OD1_45_13, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

16069..17370
DNA (1302bp) protein (434aa)
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:KKT90771.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWA2_45_13.;"
PAS domain S-box protein bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
multi-component transcriptional regulator, winged helix family
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2861_c_18
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists

17468..18004
DNA (537bp) protein (179aa)
Putative uncharacterized protein (Fragment) Tax=uncultured candidate division WS3 bacterium RepID=Q2YZV0_9BACT bin=ACD81 species=uncultured Latescibacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Latescibacteria tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
transcriptional regulator
Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2861_c_19
GWA1_OD1_49_17_curated, Parcubacteria, Bacteria

Not on your lists

18001..18489
DNA (489bp) protein (163aa)
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4] bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
ruvC; Holliday junction resolvase
Tax=GWA1_OD1_49_17_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2861_c_20

Not on your lists

comp(19175..20260)
DNA (1086bp) protein (362aa)
hypothetical protein Tax=Microgenomates bacterium SCGC AAA255-J07 RepID=UPI000374D2D2
Uncharacterized protein {ECO:0000313|EMBL:KKS33932.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_42_13.;"
hypothetical protein
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2861_c_21
R_OD1_Azambacteria_44_14, Azambacteria, Parcubacteria, Bacteria

Not on your lists

comp(20414..20707)
DNA (294bp) protein (98aa)
Tax=RIFCSPLOWO2_02_FULL_OD1_Azambacteria_44_14_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2861_c_22
unknown

Not on your lists

20896..21060
DNA (165bp) protein (55aa)

This feature has no annotations

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2861_c_23
GWA2_OD1_45_13, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

21184..23259
DNA (2076bp) protein (692aa)
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:KKT90768.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWA2_45_13.;"
1A family penicillin-binding protein bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
hypothetical protein
Displaying 24 items

View Taxonomy