ggKbase home page

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2220_c

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2220_c_1
R_RIF_OD1_13_52_23, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(146..1177)
DNA (1032bp) protein (344aa)
deoxyhypusine synthase-like protein (EC:1.5.1.-)
Deoxyhypusine synthase-like protein bin=GWF2_Syntrophobacterales_56_9 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Syntrophobacterales_56_9 organism_group=Deltaproteobacteria
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_13_52_23_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2220_c_2
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(1164..1829)
DNA (666bp) protein (222aa)
Uncharacterized protein Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LFC6_9BACT
agmatinase
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2220_c_3
R_OD1_Nomurabacteria_38_19, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(1836..1985)
DNA (150bp) protein (50aa)
speB; agmatinase (EC:3.5.3.11)
Agmatinase Tax=Synechococcus sp. (strain JA-3-3Ab) RepID=Q2JW14_SYNJA
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_38_19_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2220_c_trna_1
unknown

Not on your lists

comp(2140..2211)
DNA (72bp)
transferRNA Val
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2220_c_4
unknown

Not on your lists

comp(2269..2610)
DNA (342bp) protein (114aa)

This feature has no annotations

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2220_c_5
R_RIF_OD1_12_48_26, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

2830..3318
DNA (489bp) protein (163aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003763FCF
PaaX family transcriptional regulator
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_48_26_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2220_c_6
GWA2_OD1_45_9, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists


comp(3580..3948)
DNA (369bp) protein (123aa)
50S ribosomal protein L7/L12 {ECO:0000313|EMBL:KKU15646.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWA2_45_9.;"
rplL; 50S ribosomal protein L7/L12; K02935 large subunit ribosomal protein L7/L12 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
ribosomal protein L7/L12
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2220_c_7
GWB1_OD1_49_9, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists


comp(4023..4571)
DNA (549bp) protein (183aa)
50S ribosomal protein L10 {ECO:0000313|EMBL:KKW11820.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWB1_49_9.;"
50S ribosomal protein L10; K02864 large subunit ribosomal protein L10 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
50S ribosomal protein L10
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2220_c_8
R_OD1_Kaiserbacteria_53_17, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

4838..5263
DNA (426bp) protein (142aa)
Putative NUDIX hydrolase Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVD1_9BACT
Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_53_17_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2220_c_9
GWB1_OD1_49_9, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(5281..6387)
DNA (1107bp) protein (369aa)
Chaperone protein DnaJ {ECO:0000313|EMBL:KKW11821.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWB1_49_9.;"
chaperone protein DnaJ; K03686 molecular chaperone DnaJ bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
chaperone protein DnaJ
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2220_c_10
GWA1_OD1_49_17_curated, Parcubacteria, Bacteria

Not on your lists

comp(6526..7578)
DNA (1053bp) protein (351aa)
Tax=GWA1_OD1_49_17_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2220_c_11
GWB1_OD1_49_9, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(7575..9443)
DNA (1869bp) protein (623aa)
chaperone protein DnaK (EC:1.3.1.74); K04043 molecular chaperone DnaK bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
chaperone protein DnaK (EC:1.3.1.74)
Chaperone protein DnaK {ECO:0000313|EMBL:KKW11823.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWB1_49_9.;"
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2220_c_12
CG_Wolfe_01, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(9565..10098)
DNA (534bp) protein (178aa)
Protein GrpE Tax=uncultured bacterium RepID=K1X284_9BACT
protein grpE
Tax=CG_Wolfe_01
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2220_c_13
GWB1_OD1_49_9, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(10103..10780)
DNA (678bp) protein (226aa)
Heat-inducible transcription repressor hrcA {ECO:0000313|EMBL:KKW11825.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWB1_49_9.;"
Transcriptional regulator of heat shock gene bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
heat-inducible transcription repressor HrcA
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2220_c_14
unknown

Not on your lists

10952..11086
DNA (135bp) protein (45aa)

This feature has no annotations

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2220_c_15
GWB1_OD1_49_9, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(11026..11979)
DNA (954bp) protein (318aa)
37; Long tail fiber protein p37 Protein Gp37 (EC:3.4.21.-) bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
Uncharacterized protein {ECO:0000313|EMBL:KKW11826.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWB1_49_9.;"
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2220_c_16
GWB1_OD1_50_10, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(12328..13200)
DNA (873bp) protein (291aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW15159.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWB1_50_10.;"
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2220_c_17
unknown

Not on your lists

comp(13487..13894)
DNA (408bp) protein (136aa)

This feature has no annotations

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2220_c_18
unknown

Not on your lists

13940..14098
DNA (159bp) protein (53aa)

This feature has no annotations

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2220_c_19
GWA1_OD1_49_17_curated, Parcubacteria, Bacteria

Not on your lists

14632..15009
DNA (378bp) protein (126aa)
Tax=GWA1_OD1_49_17_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2220_c_20
GWB1_OD1_50_10, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(15283..16560)
DNA (1278bp) protein (426aa)
seryl-tRNA synthetase (EC:6.1.1.11)
hypothetical protein Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00035F88C5
Serine-tRNA ligase {ECO:0000313|EMBL:KKW15160.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWB1_50_10.;"
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2220_c_21
GWA1_OD1_48_13, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(16633..18096)
DNA (1464bp) protein (488aa)
Lysine--tRNA ligase Tax=uncultured bacterium RepID=K2AA00_9BACT
Lysine-tRNA ligase {ECO:0000313|EMBL:KKU94057.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWA1_48_13.;"
lysyl-tRNA synthetase
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2220_c_22
GWB1_OD1_49_9, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(18274..18741)
DNA (468bp) protein (156aa)
Transcription elongation factor GreA {ECO:0000313|EMBL:KKW11835.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWB1_49_9.;"
transcription elongation factor GreA; K03624 transcription elongation factor GreA bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
greA; transcription elongation factor GreA
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2220_c_23
GWB1_OD1_49_9, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(18781..20649)
DNA (1869bp) protein (623aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Uncharacterized protein Tax=uncultured bacterium RepID=K1XG91_9BACT
FtsI protein {ECO:0000313|EMBL:KKW11836.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWB1_49_9.;"
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2220_c_24
unknown

Not on your lists

comp(20646..21113)
DNA (468bp) protein (156aa)

This feature has no annotations

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2220_c_25
GWB1_OD1_49_9, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

comp(21118..21816)
DNA (699bp) protein (233aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW11838.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWB1_49_9.;"
coiled-coil 27..48 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_2220_c_26
GWA1_OD1_49_17_curated, Parcubacteria, Bacteria

Not on your lists

21990..22379
DNA (390bp) protein (130aa)
Tax=GWA1_OD1_49_17_curated
Displaying 27 items

View Taxonomy