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CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3339_c

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3339_c_1
unknown

Not on your lists

1..315
DNA (315bp) protein (105aa)

This feature has no annotations

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3339_c_2
unknown

Not on your lists

322..615
DNA (294bp) protein (98aa)

This feature has no annotations

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3339_c_3
R_RIF_OD1_11_46_22b, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(1142..2545)
DNA (1404bp) protein (468aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2AKU1_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_11_46_22b_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3339_c_4
unknown

Not on your lists

comp(2662..2922)
DNA (261bp) protein (87aa)

This feature has no annotations

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3339_c_5
RIFOXYD2_FULL_OD1_Magasanikbacteria_36_9_curated, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

3332..3823
DNA (492bp) protein (164aa)
dCMP deaminase Tax=uncultured bacterium RepID=K1Z0C6_9BACT
cell division protein DedD
Tax=RIFOXYD2_FULL_OD1_Magasanikbacteria_36_9_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3339_c_6
GWA2_OD1_56_11, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

3810..4385
DNA (576bp) protein (192aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1ZEU3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKW42915.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Magasanikbacteria) bacterium GW2011_GWA2_56_11.;"
dephospho-CoA kinase, CoaE
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3339_c_7
GWA1_OD1_48_13, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

4392..4826
DNA (435bp) protein (145aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU94321.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWA1_48_13.;"
Uncharacterized protein bin=GWA1_ZB2_49_26 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
hypothetical protein
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3339_c_8

Not on your lists

4862..5146
DNA (285bp) protein (95aa)
id=3501812 bin=GWA1_ZB2_49_26 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Uncharacterized protein {ECO:0000313|EMBL:KKW08430.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_49_26.;"
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3339_c_9
RIFOXYD12_FULL_OD1_Wolfebacteria_48_21_curated, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

5476..5736
DNA (261bp) protein (87aa)
Uncharacterized protein Tax=Methanolobus psychrophilus R15 RepID=K4MFY0_9EURY
hypothetical protein
Tax=RIFOXYD12_FULL_OD1_Wolfebacteria_48_21_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3339_c_10
GWA2_OD1_44_9, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

5835..6158
DNA (324bp) protein (108aa)
RNP-1 like protein RNA-binding protein {ECO:0000313|EMBL:KKT82579.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA2_44_9.;"
putative RNA-binding protein RbpA bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
RNP-1 like RNA-binding protein
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3339_c_11
unknown

Not on your lists

6352..6597
DNA (246bp) protein (82aa)

This feature has no annotations

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3339_c_12
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

6912..7235
DNA (324bp) protein (108aa)
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3339_c_13
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists

7238..7900
DNA (663bp) protein (221aa)
alias=gwe2_scaffold_198_2 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3339_c_14
R_OD1_56_20, Parcubacteria, Bacteria

Not on your lists

8338..9789
DNA (1452bp) protein (484aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_56_20_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3339_c_15
R_OD1_Uhrbacteria_49_11, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

10097..10657
DNA (561bp) protein (187aa)
Putative uncharacterized protein Tax=Chlorobium tepidum (strain ATCC 49652 / DSM 12025 / TLS) RepID=Q8KET7_CHLTE
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_49_11_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3339_c_16
R_OD1_52_25, Parcubacteria, Bacteria

Not on your lists

10725..11303
DNA (579bp) protein (193aa)
Transcriptional regulator, PaaX family bin=GWC2_OD1_43_27 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
paaX; phenylacetic acid degradation operon transcriptional regulator, paaX family
Tax=RIFCSPLOWO2_01_FULL_OD1_52_25_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3339_c_17
GWA1_OD1_44_24_partial, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(11417..11839)
DNA (423bp) protein (141aa)
id=3013082 bin=GWC1_OD1_38_17 species=ACD5 genus=ACD5 taxon_order=ACD5 taxon_class=ACD5 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
Tax=GWA1_OD1_44_24_partial
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3339_c_18
GWB1_OD1_50_10, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

11893..13164
DNA (1272bp) protein (424aa)
Preprotein translocase subunit SecD {ECO:0000313|EMBL:KKW14883.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWB1_50_10.;"
protein-export membrane protein SecD; K03072 preprotein translocase subunit SecD bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
protein-export membrane protein SecD
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3339_c_19
GWB1_OD1_49_9, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

13211..14107
DNA (897bp) protein (299aa)
Protein translocase subunit SecF {ECO:0000313|EMBL:KKW12303.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWB1_49_9.;"
protein-export membrane protein SecF; K03074 preprotein translocase subunit SecF bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
protein-export membrane protein SecF
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3339_c_20
GWB1_OD1_50_10, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

14262..15500
DNA (1239bp) protein (413aa)
Sigma-70 region 4 protein Tax=uncultured bacterium RepID=K1XT18_9BACT
RNA polymerase sigma factor {ECO:0000313|EMBL:KKW14885.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWB1_50_10.;"
hypothetical protein
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3339_c_21
GWA1_OD1_48_11, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

15451..16797
DNA (1347bp) protein (449aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU90964.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWA1_48_11.;"
id=2607519 bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3339_c_22
GWA1_OD1_48_11, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

16810..17334
DNA (525bp) protein (175aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU90963.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWA1_48_11.;"
id=3736746 bin=GWC2_OD1_43_27 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3339_c_23
GWA1_OD1_48_11, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

17436..18884
DNA (1449bp) protein (483aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU90962.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWA1_48_11.;"
Putative uncharacterized protein bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
hypothetical protein
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3339_c_24
RLO_OD1_41_13, Parcubacteria, Bacteria

Not on your lists

19450..19563
DNA (114bp) protein (38aa)
seg bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPLOWO2_12_FULL_OD1_41_13_curated
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3339_c_25
GWA1_OD1_48_11, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists

20413..21951
DNA (1539bp) protein (513aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU91178.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWA1_48_11.;"
alias=gwe2_scaffold_594_3 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3339_c_26

Not on your lists

22012..22254
DNA (243bp) protein (81aa)
Translation initiation factor IF-1 Tax=Deinococcus maricopensis (strain DSM 21211 / LMG 22137 / NRRL B-23946 / LB-34) RepID=E8UBV8_DEIML
Uncharacterized protein {ECO:0000313|EMBL:KKL93925.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
translation initiation factor IF-1
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3339_c_27
GWB1_OD1_50_10, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists


22688..23071
DNA (384bp) protein (128aa)
30S ribosomal protein S13 {ECO:0000313|EMBL:KKW15481.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWB1_50_10.;"
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
30S ribosomal protein S13
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3339_c_28
GWB1_OD1_49_9, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists


23303..23746
DNA (444bp) protein (148aa)
Ribosomal protein S11, bacterial-type {ECO:0000313|EMBL:KKW11851.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWB1_49_9.;"
SSU ribosomal protein S11P bin=GWC2_OD1_43_27 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
SSU ribosomal protein S11P
CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3339_c_29
unknown

Not on your lists

23861..23980
DNA (120bp) protein (40aa)

This feature has no annotations

CG23_combo_of_CG06-09_8_20_14_all_150_scaffold_3339_c_30
GWA2_OD1_45_13, Jorgensenbacteria, Parcubacteria, Bacteria

Not on your lists


23990..24589
DNA (600bp) protein (200aa)
30S ribosomal protein S4 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQN9_9FIRM bin=ACD81 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
30S ribosomal protein S4 {ECO:0000313|EMBL:KKT91156.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Jorgensenbacteria) bacterium GW2011_GWA2_45_13.;"
30S ribosomal protein S4
Displaying items 1-30 of 37 in total

View Taxonomy