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ACD40_20

Alias: ACD40_65497.6057.13

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD40_20_1
GWA2_OP11_46_16_partial, Microgenomates, Bacteria

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1..807
DNA (807bp) protein (269aa)
seg (db=Seg db_id=seg from=121 to=131)
Uncharacterized protein {ECO:0000313|EMBL:KKU26474.1}; TaxID=1618501 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWA2_46_16.;"
ACD40_20_2

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807..1352
DNA (546bp) protein (182aa)
transposase
Transposase IS200-like (db=superfamily db_id=SSF143422 from=23 to=164 evalue=6.7e-17)
Uncharacterized protein {ECO:0000313|EMBL:EKD79962.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein alias=ACD40_65497.6057.13G0002,ACD40_65497.6057.13_2,ACD40_C00020G00002 id=51532 tax=ACD40 species=Haemophilus parasuis genus=Haemophilus taxon_order=Pasteurellales taxon_class=Gammaproteobacteria phylum=Proteobacteria organism_group=OP11 organism_desc=OP11
ACD40_20_3
GWA2_OP11_46_16_partial, Microgenomates, Bacteria

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1349..1870
DNA (522bp) protein (174aa)
recO; DNA repair protein RecO
seg (db=Seg db_id=seg from=136 to=143)
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=1 to=79 evalue=8.6e-17 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
RecO_N (db=HMMPfam db_id=PF11967 from=1 to=77 evalue=2.9e-16)
ACD40_20_4
GWA2_OP11_46_16_partial, Microgenomates, Bacteria

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1913..2119
DNA (207bp) protein (69aa)
1913..2119 + (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=GWA2_OP11_46_16_partial
ACD40_20_5
GWA2_OP11_46_16_partial, Microgenomates, Bacteria

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2124..3170
DNA (1047bp) protein (349aa)
glyQS; Glycine--tRNA ligase (EC:6.1.1.14)
glyQS; Glycine--tRNA ligase (EC:6.1.1.14)
Glycyl-tRNA synthetase n=1 Tax=Thermomicrobium roseum DSM 5159 RepID=SYG_THERP (db=UNIREF evalue=8.0e-113 bit_score=410.0 identity=56.34 coverage=95.9885386819484)
seg (db=Seg db_id=seg from=341 to=348)
ACD40_20_6
GWC2_OP11_45_8_partial, Microgenomates, Bacteria

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3205..3522
DNA (318bp) protein (106aa)
hypothetical protein
seg (db=Seg db_id=seg from=77 to=86)
no description (db=Gene3D db_id=G3DSA:3.40.50.800 from=2 to=100 evalue=6.7e-33 interpro_id=IPR004154 interpro_description=Anticodon-binding GO=Molecular Function: aminoacyl-tRNA ligase activity (GO:0004812), Molecular Function: ATP binding (GO:0005524), Biological Process: translation (GO:0006412))
GLYCYL-TRNA SYNTHETASE (db=HMMPanther db_id=PTHR10745 from=2 to=105 evalue=3.0e-32 interpro_id=IPR018160 interpro_description=Glycyl-tRNA synthetase, alpha2 dimer, C-terminal GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: glycine-tRNA ligase activity (GO:0004820), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: glycyl-tRNA aminoacylation (GO:0006426))
ACD40_20_7

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comp(3849..4211)
DNA (363bp) protein (121aa)
3849..4211 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD79960.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD40_20_8

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comp(4390..5391)
DNA (1002bp) protein (334aa)
DIT1_PvcA (db=HMMPfam db_id=PF05141 from=61 to=217 evalue=1.9e-06 interpro_id=IPR007817 interpro_description=Pyoverdine biosynthesis)
Uncharacterized protein {ECO:0000313|EMBL:EKD79956.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD40_20_9

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comp(5492..5854)
DNA (363bp) protein (121aa)
5492..5854 - (rbs_motif=ATA rbs_spacer=8bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD79957.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD40_20_10
GWA2_OP11_46_16_partial, Microgenomates, Bacteria

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6015..6095
DNA (81bp) protein (27aa)
MraZ (db=HMMPfam db_id=PF02381 from=1 to=26 evalue=8.2e-07 interpro_id=IPR020603 interpro_description=MraZ domain)
AbrB/MazE/MraZ-like (db=superfamily db_id=SSF89447 from=1 to=26 evalue=1.0e-06)
Q3E332_CHLAU_Q3E332; (db=BlastProDom db_id=PD006745 from=1 to=26 evalue=0.001 interpro_id=IPR003444 interpro_description=MraZ)
Protein MraZ {ECO:0000313|EMBL:KKU26481.1}; TaxID=1618501 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWA2_46_16.;"
Displaying 10 items

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