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ACD40_25

Alias: ACD40_41362.10456.13

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD40_25_1

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1..513
DNA (513bp) protein (171aa)
cell envelope-related transcriptional attenuator
seg (db=Seg db_id=seg from=78 to=93)
LytR_cpsA_psr (db=HMMPfam db_id=PF03816 from=25 to=78 evalue=2.9e-09 interpro_id=IPR004474 interpro_description=Cell envelope-related transcriptional attenuator)
Cell envelope-related transcriptional attenuator {ECO:0000313|EMBL:EKD80255.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD40_25_2

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comp(931..1131)
DNA (201bp) protein (67aa)
931..1131 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD80256.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD40_25_3

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1343..2932
DNA (1590bp) protein (530aa)
dolichyl-phosphate-mannose-protein mannosyltransferase
transmembrane_regions (db=TMHMM db_id=tmhmm from=340 to=362)
transmembrane_regions (db=TMHMM db_id=tmhmm from=409 to=431)
transmembrane_regions (db=TMHMM db_id=tmhmm from=438 to=457)
ACD40_25_4

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comp(2941..4266)
DNA (1326bp) protein (442aa)
seg (db=Seg db_id=seg from=426 to=441)
seg (db=Seg db_id=seg from=11 to=22)
transmembrane_regions (db=TMHMM db_id=tmhmm from=418 to=440)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=28)
ACD40_25_5
GWC2_OP11_45_8_partial, Microgenomates, Bacteria

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comp(4263..4493)
DNA (231bp) protein (77aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
Tax=GWC2_OP11_45_8_partial
ACD40_25_6
GWC2_OP11_45_8_partial, Microgenomates, Bacteria

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comp(5202..5780)
DNA (579bp) protein (193aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=39 to=58)
Tax=GWC2_OP11_45_8_partial
ACD40_25_7

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comp(5800..6087)
DNA (288bp) protein (96aa)
Ribosomal protein S20 (db=superfamily db_id=SSF46992 from=19 to=95 evalue=2.6e-10 interpro_id=IPR002583 interpro_description=Ribosomal protein S20 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_S20p (db=HMMPfam db_id=PF01649 from=20 to=94 evalue=1.4e-08 interpro_id=IPR002583 interpro_description=Ribosomal protein S20 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
no description (db=Gene3D db_id=G3DSA:1.20.58.110 from=21 to=93 evalue=6.1e-08 interpro_id=IPR002583 interpro_description=Ribosomal protein S20 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_S20 (db=HAMAP db_id=MF_00500 from=17 to=94 evalue=11.353 interpro_id=IPR002583 interpro_description=Ribosomal protein S20 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD40_25_8

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comp(6098..7351)
DNA (1254bp) protein (418aa)
hypothetical protein
seg (db=Seg db_id=seg from=291 to=300)
seg (db=Seg db_id=seg from=382 to=395)
Uncharacterized protein {ECO:0000313|EMBL:EKD80250.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD40_25_9

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comp(7440..7766)
DNA (327bp) protein (109aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=30)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=21 evalue=8.0)
Uncharacterized protein {ECO:0000313|EMBL:EKD80251.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD40_25_10
GWC2_OP11_45_8_partial, Microgenomates, Bacteria

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7855..8562
DNA (708bp) protein (236aa)
putative peptidoglycan lipid II flippase MurJ
seg (db=Seg db_id=seg from=208 to=222)
transmembrane_regions (db=TMHMM db_id=tmhmm from=171 to=193)
transmembrane_regions (db=TMHMM db_id=tmhmm from=145 to=164)
ACD40_25_11

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8537..9550
DNA (1014bp) protein (338aa)
putative peptidoglycan lipid II flippase MurJ
seg (db=Seg db_id=seg from=122 to=134)
transmembrane_regions (db=TMHMM db_id=tmhmm from=279 to=301)
transmembrane_regions (db=TMHMM db_id=tmhmm from=242 to=264)
ACD40_25_12

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9560..10492
DNA (933bp) protein (311aa)
lepA; GTP-binding protein LepA
seg (db=Seg db_id=seg from=66 to=75)
EFACTOR_GTP (db=PatternScan db_id=PS00301 from=79 to=94 evalue=0.0 interpro_id=IPR000795 interpro_description=Protein synthesis factor, GTP-binding GO=Molecular Function: GTPase activity (GO:0003924), Molecular Function: GTP binding (GO:0005525))
TRANSLATION FACTOR (db=HMMPanther db_id=PTHR23115 from=35 to=309 evalue=6.0e-109)
Displaying 12 items

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