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ACD40_28

Alias: ACD40_74289.6655.12

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD40_28_1

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comp(3..506)
DNA (504bp) protein (168aa)
GTP-binding protein
MITOCHONDRIAL GTPASE 2(YEAST)/OBG-RELATED (db=HMMPanther db_id=PTHR11702:SF3 from=2 to=168 evalue=3.3e-54 interpro_id=IPR014100 interpro_description=GTP-binding protein Obg/CgtA)
DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED (db=HMMPanther db_id=PTHR11702 from=2 to=168 evalue=3.3e-54)
Obg GTP-binding protein N-terminal domain (db=superfamily db_id=SSF82051 from=2 to=133 evalue=3.7e-28 interpro_id=IPR006169 interpro_description=GTP1/OBG subdomain GO=Molecular Function: GTP binding (GO:0005525))
ACD40_28_2

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783..2321
DNA (1539bp) protein (513aa)
hypothetical protein (db=KEGG evalue=9.0e-25 bit_score=118.0 identity=27.14 coverage=71.9298245614035)
seg (db=Seg db_id=seg from=376 to=390)
seg (db=Seg db_id=seg from=64 to=75)
seg (db=Seg db_id=seg from=9 to=32)
ACD40_28_3
Microgenomates bacterium GW2011_GWF2_46_18, Microgenomates, Bacteria

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comp(2328..2747)
DNA (420bp) protein (140aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=31 to=53)
transmembrane_regions (db=TMHMM db_id=tmhmm from=60 to=82)
seg (db=Seg db_id=seg from=36 to=49)
seg (db=Seg db_id=seg from=62 to=78)
ACD40_28_4
Microgenomates bacterium GW2011_GWF2_46_18, Microgenomates, Bacteria

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comp(2701..2946)
DNA (246bp) protein (82aa)
GTPase ObgE
seg (db=Seg db_id=seg from=28 to=42)
GTP1_OBG (db=HMMPfam db_id=PF01018 from=3 to=72 evalue=2.5e-27 interpro_id=IPR006169 interpro_description=GTP1/OBG subdomain GO=Molecular Function: GTP binding (GO:0005525))
MITOCHONDRIAL GTPASE 2(YEAST)/OBG-RELATED (db=HMMPanther db_id=PTHR11702:SF3 from=1 to=71 evalue=2.0e-23 interpro_id=IPR014100 interpro_description=GTP-binding protein Obg/CgtA)
ACD40_28_5
Microgenomates bacterium GW2011_GWF2_46_18, Microgenomates, Bacteria

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comp(2978..3106)
DNA (129bp) protein (43aa)
seg (db=Seg db_id=seg from=12 to=23)
Uncharacterized protein {ECO:0000313|EMBL:KKU28025.1}; TaxID=1618540 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWF2_46_18.;"
ACD40_28_6

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3283..3546
DNA (264bp) protein (88aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=56 to=78)
seg (db=Seg db_id=seg from=64 to=78)
Uncharacterized protein {ECO:0000313|EMBL:EKD79864.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD40_28_7
GWC1_OP11_46_16, Microgenomates, Bacteria

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comp(4183..4386)
DNA (204bp) protein (68aa)
seg (db=Seg db_id=seg from=57 to=67)
seg (db=Seg db_id=seg from=4 to=13)
Tax=GWC1_OP11_46_16
ACD40_28_8

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4458..5198
DNA (741bp) protein (247aa)
SPFH protein
seg (db=Seg db_id=seg from=168 to=179)
seg (db=Seg db_id=seg from=214 to=225)
seg (db=Seg db_id=seg from=3 to=16)
ACD40_28_9

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5410..5736
DNA (327bp) protein (109aa)
Putative uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F7V8_9ACTN (db=UNIREF evalue=4.0e-19 bit_score=97.1 identity=47.17 coverage=94.4954128440367)
O-6-methylguanine DNA methyltransferase
DNA_binding_1 (db=HMMPfam db_id=PF01035 from=8 to=91 evalue=2.6e-22 interpro_id=IPR014048 interpro_description=Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: DNA repair (GO:0006281))
Methylated DNA-protein cysteine methyltransferase, C-terminal domain (db=superfamily db_id=SSF46767 from=6 to=89 evalue=9.5e-19 interpro_id=IPR014048 interpro_description=Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: DNA repair (GO:0006281))
ACD40_28_10

Not on your lists

5813..6691
DNA (879bp) protein (293aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=17 to=34)
seg (db=Seg db_id=seg from=83 to=124)
Uncharacterized protein {ECO:0000313|EMBL:EKD79862.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 10 items

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