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ACD40_35

Alias: ACD40_11732.26965.14

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD40_35_1
GWC2_OP11_45_8_partial, Microgenomates, Bacteria

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1..357
DNA (357bp) protein (119aa)
cell division protein FtsZ
seg (db=Seg db_id=seg from=90 to=108)
FtsZ_C (db=HMMPfam db_id=PF12327 from=1 to=64 evalue=2.3e-22)
Tubulin C-terminal domain-like (db=superfamily db_id=SSF55307 from=1 to=65 evalue=6.3e-21 interpro_id=IPR008280 interpro_description=Tubulin/FtsZ, C-terminal GO=Molecular Function: GTPase activity (GO:0003924), Molecular Function: GTP binding (GO:0005525), Cellular Component: protein complex (GO:0043234), Biological Process: protein polymerization (GO:0051258))
ACD40_35_2

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comp(359..829)
DNA (471bp) protein (157aa)
greA; Transcription elongation factor greA
GREAB_2 (db=PatternScan db_id=PS00830 from=121 to=137 evalue=0.0 interpro_id=IPR018151 interpro_description=Transcription elongation factor, GreA/GreB, conserved site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
GreA_GreB (db=HMMPfam db_id=PF01272 from=85 to=156 evalue=3.0e-20 interpro_id=IPR001437 interpro_description=Transcription elongation factor, GreA/GreB, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
FKBP-like (db=superfamily db_id=SSF54534 from=82 to=155 evalue=2.2e-17)
ACD40_35_3

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837..3638
DNA (2802bp) protein (934aa)
Isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucyl-tRNA synthetase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RS62_FIBSS (db=UNIREF evalue=0.0 bit_score=716.0 identity=43.31 coverage=88.3297644539615)
seg (db=Seg db_id=seg from=107 to=120)
ACD40_35_4

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3659..4729
DNA (1071bp) protein (357aa)
mrdB; Rod shape-determining protein RodA
Rod shape-determining protein n=1 Tax=Arsenophonus nasoniae RepID=D2U478_9ENTR (db=UNIREF evalue=2.0e-50 bit_score=203.0 identity=40.19 coverage=89.0756302521009)
seg (db=Seg db_id=seg from=220 to=232)
transmembrane_regions (db=TMHMM db_id=tmhmm from=290 to=312)
ACD40_35_5

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4751..5128
DNA (378bp) protein (126aa)
50S ribosomal protein L21
50S ribosomal protein L21 n=1 Tax=Nitrosomonas sp. AL212 RepID=C6ME78_9PROT (db=UNIREF evalue=8.0e-23 bit_score=109.0 identity=50.0 coverage=79.3650793650794)
L21: ribosomal protein L21 (db=HMMTigr db_id=TIGR00061 from=3 to=102 evalue=8.3e-34 interpro_id=IPR001787 interpro_description=Ribosomal protein L21 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_L21p (db=HMMPfam db_id=PF00829 from=3 to=96 evalue=1.1e-29 interpro_id=IPR001787 interpro_description=Ribosomal protein L21 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD40_35_6

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5130..6206
DNA (1077bp) protein (359aa)
hypothetical protein
RNA methylase, putative n=2 Tax=Thermococcus RepID=C5A4X7_THEGJ (db=UNIREF evalue=1.0e-23 bit_score=114.0 identity=32.0 coverage=72.1448467966574)
seg (db=Seg db_id=seg from=9 to=22)
UPF0020 (db=HMMPfam db_id=PF01170 from=164 to=266 evalue=1.3e-16 interpro_id=IPR000241 interpro_description=Putative RNA methylase)
ACD40_35_7

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6210..6455
DNA (246bp) protein (82aa)
50S ribosomal protein L27
Ribosomal_L27 (db=HMMPfam db_id=PF01016 from=3 to=80 evalue=2.3e-27 interpro_id=IPR001684 interpro_description=Ribosomal protein L27 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
RIBOSOMALL27 (db=FPrintScan db_id=PR00063 from=54 to=78 evalue=1.0e-26 interpro_id=IPR001684 interpro_description=Ribosomal protein L27 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
RIBOSOMALL27 (db=FPrintScan db_id=PR00063 from=4 to=28 evalue=1.0e-26 interpro_id=IPR001684 interpro_description=Ribosomal protein L27 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD40_35_8

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7330..7479
DNA (150bp) protein (50aa)
7330..7479 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD80697.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD40_35_9

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comp(7476..8774)
DNA (1299bp) protein (433aa)
GDP-mannose 4,6 dehydratase ISS
coiled-coil (db=Coil db_id=coil from=214 to=235 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
seg (db=Seg db_id=seg from=217 to=228)
ACD40_35_10

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8895..9491
DNA (597bp) protein (199aa)
putative signal peptidase I
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
SPASE_I_2 (db=PatternScan db_id=PS00760 from=85 to=97 evalue=0.0 interpro_id=IPR019757 interpro_description=Peptidase S26A, signal peptidase I, lysine active site GO=Molecular Function: serine-type peptidase activity (GO:0008236), Cellular Component: integral to membrane (GO:0016021))
SPASE_I_3 (db=PatternScan db_id=PS00761 from=139 to=152 evalue=0.0 interpro_id=IPR019758 interpro_description=Peptidase S26A, signal peptidase I, conserved site GO=Molecular Function: serine-type peptidase activity (GO:0008236), Cellular Component: integral to membrane (GO:0016021))
ACD40_35_11

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10376..10756
DNA (381bp) protein (127aa)
seg (db=Seg db_id=seg from=50 to=62)
seg (db=Seg db_id=seg from=2 to=16)
transmembrane_regions (db=TMHMM db_id=tmhmm from=95 to=117)
transmembrane_regions (db=TMHMM db_id=tmhmm from=68 to=90)
ACD40_35_12

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10753..11439
DNA (687bp) protein (229aa)
nucleotidyl transferase
seg (db=Seg db_id=seg from=116 to=129)
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=2 to=223 evalue=1.0e-25)
no description (db=Gene3D db_id=G3DSA:3.90.550.10 from=3 to=223 evalue=5.3e-20)
ACD40_35_13

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11429..12307
DNA (879bp) protein (293aa)
family 2 glycosyl transferase
no description (db=Gene3D db_id=G3DSA:3.90.550.10 from=5 to=221 evalue=2.4e-59)
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=5 to=221 evalue=6.6e-57)
Glycos_transf_2 (db=HMMPfam db_id=PF00535 from=8 to=151 evalue=5.5e-36 interpro_id=IPR001173 interpro_description=Glycosyl transferase, family 2)
ACD40_35_14

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comp(12241..14916)
DNA (2676bp) protein (892aa)
hypothetical protein
seg (db=Seg db_id=seg from=817 to=856)
seg (db=Seg db_id=seg from=633 to=647)
seg (db=Seg db_id=seg from=549 to=567)
ACD40_35_15

Not on your lists

14946..16055
DNA (1110bp) protein (370aa)
glycosyltransferase
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=11 to=369 evalue=8.3e-34)
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526 from=69 to=369 evalue=1.1e-25)
Glycos_transf_1 (db=HMMPfam db_id=PF00534 from=187 to=345 evalue=4.3e-25 interpro_id=IPR001296 interpro_description=Glycosyl transferase, group 1 GO=Biological Process: biosynthetic process (GO:0009058))
ACD40_35_16
GWA2_OP11_46_16_partial, Microgenomates, Bacteria

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16052..17095
DNA (1044bp) protein (348aa)
putative glycosyltransferase
seg (db=Seg db_id=seg from=192 to=203)
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=25 to=346 evalue=6.8e-47)
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526:SF44 from=123 to=346 evalue=2.4e-30)
ACD40_35_17
GWA2_OP11_46_16_partial, Microgenomates, Bacteria

Not on your lists

17105..18553
DNA (1449bp) protein (483aa)
seg (db=Seg db_id=seg from=349 to=362)
seg (db=Seg db_id=seg from=318 to=330)
seg (db=Seg db_id=seg from=299 to=311)
seg (db=Seg db_id=seg from=141 to=152)
ACD40_35_18
GWC2_OP11_45_8_partial, Microgenomates, Bacteria

Not on your lists

18543..19847
DNA (1305bp) protein (435aa)
AAA ATPase n=1 Tax=Sulfurihydrogenibium sp. YO3AOP1 RepID=B2V894_SULSY (db=UNIREF evalue=6.0e-116 bit_score=421.0 identity=48.36 coverage=97.2413793103448)
TPR domain-containing protein
TPR domain-containing protein
DNA HELICASE-RELATED (db=HMMPanther db_id=PTHR23274 from=18 to=403 evalue=1.1e-58)
ACD40_35_19
GWC2_OP11_45_8_partial, Microgenomates, Bacteria

Not on your lists

19905..20540
DNA (636bp) protein (212aa)
lexA; LexA repressor (EC:3.4.21.88)
seg (db=Seg db_id=seg from=48 to=59)
lexA: repressor LexA (db=HMMTigr db_id=TIGR00498 from=3 to=209 evalue=2.4e-34 interpro_id=IPR006200 interpro_description=Peptidase S24, LexA repressor GO=Molecular Function: serine-type endopeptidase activity (GO:0004252), Biological Process: proteolysis (GO:0006508))
LexA/Signal peptidase (db=superfamily db_id=SSF51306 from=81 to=206 evalue=6.6e-26 interpro_id=IPR015927 interpro_description=Peptidase S24/S26A/S26B/S26C)
ACD40_35_20

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20543..22489
DNA (1947bp) protein (649aa)
type I restriction-modification protein subunit M
type I restriction-modification protein subunit M
Type I site-specific deoxyribonuclease methyltransferase subunit n=2 Tax=Mannheimia haemolytica RepID=A7JW43_PASHA (db=UNIREF evalue=5.0e-130 bit_score=468.0 identity=43.66 coverage=86.286594761171)
seg (db=Seg db_id=seg from=455 to=467)
ACD40_35_21
GWA2_OP11_46_16_partial, Microgenomates, Bacteria

Not on your lists

22486..23865
DNA (1380bp) protein (460aa)
hypothetical protein
coiled-coil (db=Coil db_id=coil from=431 to=459 evalue=NA)
DNA methylase specificity domain (db=superfamily db_id=SSF116734 from=35 to=218 evalue=1.5e-14)
DNA methylase specificity domain (db=superfamily db_id=SSF116734 from=269 to=451 evalue=2.2e-11)
ACD40_35_22
GWA2_OP11_46_16_partial, Microgenomates, Bacteria

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comp(23870..24052)
DNA (183bp) protein (61aa)
23870..24052 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:KKU25763.1}; TaxID=1618501 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWA2_46_16.;"
ACD40_35_23
GWA2_OP11_46_16_partial, Microgenomates, Bacteria

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comp(24125..24703)
DNA (579bp) protein (193aa)
Hypoxanthine phosphoribosyltransferase n=1 Tax=Oribacterium sinus F0268 RepID=C2KYE9_9FIRM (db=UNIREF evalue=1.0e-14 bit_score=82.8 identity=34.46 coverage=84.4559585492228)
hprT; hypoxanthine-guanine phosphoribosyltransferase; K00760 hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] (db=KEGG evalue=2.0e-14 bit_score=82.0 identity=33.52 coverage=83.419689119171)
no description (db=Gene3D db_id=G3DSA:3.40.50.2020 from=14 to=188 evalue=1.3e-17)
PRTase-like (db=superfamily db_id=SSF53271 from=6 to=191 evalue=4.3e-17)
ACD40_35_24

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24773..25861
DNA (1089bp) protein (363aa)
hypothetical protein
seg (db=Seg db_id=seg from=111 to=123)
seg (db=Seg db_id=seg from=74 to=87)
seg (db=Seg db_id=seg from=27 to=44)
ACD40_35_25
GWA2_OP11_46_16_partial, Microgenomates, Bacteria

Not on your lists

25858..26694
DNA (837bp) protein (279aa)
putative glycosyltransferase
Nucleotide-diphospho-sugar transferases (db=superfamily db_id=SSF53448 from=4 to=255 evalue=2.4e-31)
no description (db=Gene3D db_id=G3DSA:3.90.550.10 from=1 to=211 evalue=3.0e-12)
Glycos_transf_2 (db=HMMPfam db_id=PF00535 from=5 to=167 evalue=1.1e-10 interpro_id=IPR001173 interpro_description=Glycosyl transferase, family 2)
ACD40_35_26
GWA2_OP11_46_16_partial, Microgenomates, Bacteria

Not on your lists

26711..27001
DNA (291bp) protein (97aa)
family 2 glycosyl transferase
Glycos_transf_2 (db=HMMPfam db_id=PF00535 from=5 to=81 evalue=1.3e-06 interpro_id=IPR001173 interpro_description=Glycosyl transferase, family 2)
glycosyl transferase family 2 alias=ACD40_C00035G00026,ACD40_11732.26965.14G0026,ACD40_11732.26965.14_26 id=51679 tax=ACD40 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OP11 organism_desc=OP11
Glycosyl transferase family 2 Tax=GWA2_OP11_46_16_partial
Displaying 26 items

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