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ACD40_36

Alias: ACD40_40926.4995.12

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD40_36_1

Not on your lists

comp(2..1561)
DNA (1560bp) protein (520aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
coiled-coil (db=Coil db_id=coil from=184 to=205 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKD80267.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD40_36_2

Not on your lists

comp(1558..1857)
DNA (300bp) protein (100aa)
seg (db=Seg db_id=seg from=69 to=85)
transmembrane_regions (db=TMHMM db_id=tmhmm from=63 to=85)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
Uncharacterized protein {ECO:0000313|EMBL:EKD80268.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD40_36_3

Not on your lists

comp(1971..2324)
DNA (354bp) protein (118aa)
seg (db=Seg db_id=seg from=80 to=94)
seg (db=Seg db_id=seg from=55 to=66)
seg (db=Seg db_id=seg from=42 to=54)
transmembrane_regions (db=TMHMM db_id=tmhmm from=80 to=102)
ACD40_36_4

Not on your lists

comp(2366..2671)
DNA (306bp) protein (102aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=36 to=58)
transmembrane_regions (db=TMHMM db_id=tmhmm from=71 to=88)
Uncharacterized protein {ECO:0000313|EMBL:EKD80270.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD40_36_5

Not on your lists

comp(2685..3023)
DNA (339bp) protein (113aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=35 to=57)
transmembrane_regions (db=TMHMM db_id=tmhmm from=78 to=100)
Uncharacterized protein {ECO:0000313|EMBL:EKD80271.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD40_36_6

Not on your lists

comp(3026..3394)
DNA (369bp) protein (123aa)
seg (db=Seg db_id=seg from=83 to=99)
transmembrane_regions (db=TMHMM db_id=tmhmm from=83 to=105)
transmembrane_regions (db=TMHMM db_id=tmhmm from=40 to=62)
Uncharacterized protein {ECO:0000313|EMBL:EKD80272.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD40_36_7

Not on your lists

comp(3391..3753)
DNA (363bp) protein (121aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=36 to=58)
transmembrane_regions (db=TMHMM db_id=tmhmm from=79 to=101)
Uncharacterized protein {ECO:0000313|EMBL:EKD80273.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD40_36_8

Not on your lists

comp(3756..4073)
DNA (318bp) protein (106aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=36 to=58)
transmembrane_regions (db=TMHMM db_id=tmhmm from=71 to=93)
seg (db=Seg db_id=seg from=43 to=56)
Uncharacterized protein {ECO:0000313|EMBL:EKD80274.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD40_36_9

Not on your lists

4108..4653
DNA (546bp) protein (182aa)
RNA polymerase subunit sigma-24
seg (db=Seg db_id=seg from=108 to=122)
SIGMA70_ECF (db=PatternScan db_id=PS01063 from=41 to=72 evalue=0.0 interpro_id=IPR000838 interpro_description=RNA polymerase sigma factor 70, ECF, conserved site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=14 to=174 evalue=9.2e-34 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
ACD40_36_10

Not on your lists

4628..4870
DNA (243bp) protein (81aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=46 to=68)
Uncharacterized protein {ECO:0000313|EMBL:EKD80276.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD40_36_11

Not on your lists

4867..5031
DNA (165bp) protein (55aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=23)
transmembrane_regions (db=TMHMM db_id=tmhmm from=36 to=54)
Uncharacterized protein {ECO:0000313|EMBL:EKD80277.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 11 items

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