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ACD40_49

Alias: ACD40_16786.6395.14

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD40_49_1

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comp(2..238)
DNA (237bp) protein (79aa)
TatD family hydrolase
Metallo-dependent hydrolases (db=superfamily db_id=SSF51556 from=1 to=71 evalue=3.8e-19)
TatD_DNase (db=HMMPfam db_id=PF01026 from=3 to=68 evalue=1.5e-15 interpro_id=IPR001130 interpro_description=Deoxyribonuclease, TatD-related GO=Molecular Function: endodeoxyribonuclease activity, producing 5'-phosphomonoesters (GO:0016888))
no description (db=Gene3D db_id=G3DSA:3.20.20.140 from=2 to=68 evalue=3.6e-14)
ACD40_49_2
GWA2_OP11_46_16_partial, Microgenomates, Bacteria

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comp(253..1446)
DNA (1194bp) protein (398aa)
major facilitator superfamily MFS_1
transmembrane_regions (db=TMHMM db_id=tmhmm from=342 to=364)
transmembrane_regions (db=TMHMM db_id=tmhmm from=369 to=391)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=37)
ACD40_49_3
GWA2_OP11_46_16_partial, Microgenomates, Bacteria

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comp(1480..2334)
DNA (855bp) protein (285aa)
rRNA (adenine-N(6)-)-methyltransferase (EC:2.1.1.48)
seg (db=Seg db_id=seg from=269 to=279)
coiled-coil (db=Coil db_id=coil from=256 to=284 evalue=NA)
RRNA_A_DIMETH (db=PatternScan db_id=PS01131 from=33 to=60 evalue=0.0 interpro_id=IPR020596 interpro_description=Ribosomal RNA adenine methylase transferase, conserved site GO=Biological Process: rRNA modification (GO:0000154), Molecular Function: rRNA (adenine-N6,N6-)-dimethyltransferase activity (GO:0000179), Molecular Function: rRNA methyltransferase activity (GO:0008649))
ACD40_49_4
GWA2_OP11_46_16_partial, Microgenomates, Bacteria

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comp(2380..3813)
DNA (1434bp) protein (478aa)
methionyl-tRNA synthetase
methionyl-tRNA synthetase
Methionyl-tRNA synthetase n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RMF2_MOOTA (db=UNIREF evalue=6.0e-95 bit_score=351.0 identity=38.1 coverage=98.9539748953975)
metG: methionyl-tRNA synthetase (db=HMMTigr db_id=TIGR00398 from=5 to=477 evalue=1.2e-119 interpro_id=IPR002304 interpro_description=Methionyl-tRNA synthetase, class Ia GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: methionine-tRNA ligase activity (GO:0004825), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: methionyl-tRNA aminoacylation (GO:0006431))
ACD40_49_5
GWA2_OP11_46_16_partial, Microgenomates, Bacteria

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comp(4229..4546)
DNA (318bp) protein (106aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=24)
transmembrane_regions (db=TMHMM db_id=tmhmm from=39 to=61)
transmembrane_regions (db=TMHMM db_id=tmhmm from=73 to=95)
seg (db=Seg db_id=seg from=86 to=98)
ACD40_49_6
GWA2_OP11_46_16_partial, Microgenomates, Bacteria

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4566..5543
DNA (978bp) protein (326aa)
Putative DNA recombination protein n=1 Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVA7_9BACT (db=UNIREF evalue=3.0e-53 bit_score=212.0 identity=35.44 coverage=86.8098159509202)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=22)
seg (db=Seg db_id=seg from=8 to=25)
ACD40_49_7
GWA2_OP11_46_16_partial, Microgenomates, Bacteria

Not on your lists

5540..6214
DNA (675bp) protein (225aa)
seg (db=Seg db_id=seg from=78 to=92)
HD-domain/PDEase-like (db=superfamily db_id=SSF109604 from=11 to=193 evalue=1.2e-09)
no description (db=Gene3D db_id=G3DSA:1.10.3210.10 from=3 to=193 evalue=1.2e-07)
UNCHARACTERIZED (db=HMMPanther db_id=PTHR11845 from=12 to=135 evalue=1.2e-06)
ACD40_49_8

Not on your lists

6239..6433
DNA (195bp) protein (65aa)
UvrD/REP helicase
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=7 to=65 evalue=4.6e-13)
UvrD-helicase (db=HMMPfam db_id=PF00580 from=17 to=65 evalue=6.3e-12 interpro_id=IPR000212 interpro_description=DNA helicase, UvrD/REP type GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: ATP-dependent DNA helicase activity (GO:0004003), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA repair (GO:0006281))
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=6 to=65 evalue=2.4e-09)
Displaying 8 items

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