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ACD40_54

Alias: ACD40_95924.9846.12

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD40_54_1

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414..1385
DNA (972bp) protein (324aa)
hypothetical protein
seg (db=Seg db_id=seg from=220 to=229)
prc: C-terminal processing peptidase (db=HMMTigr db_id=TIGR00225 from=1 to=323 evalue=5.4e-77 interpro_id=IPR004447 interpro_description=Peptidase S41A, C-terminal peptidase GO=Biological Process: proteolysis (GO:0006508), Molecular Function: serine-type peptidase activity (GO:0008236))
ClpP/crotonase (db=superfamily db_id=SSF52096 from=1 to=306 evalue=2.4e-64)
ACD40_54_2
GWA2_OP11_46_16_partial, Microgenomates, Bacteria

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1513..2694
DNA (1182bp) protein (394aa)
Trypsin
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=168 to=178)
seg (db=Seg db_id=seg from=9 to=24)
ACD40_54_3
GWA2_OP11_46_16_partial, Microgenomates, Bacteria

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comp(2695..3345)
DNA (651bp) protein (217aa)
Peptide chain release factor 1
seg (db=Seg db_id=seg from=192 to=208)
RF_PROK_I (db=PatternScan db_id=PS00745 from=92 to=108 evalue=0.0 interpro_id=IPR000352 interpro_description=Class I peptide chain release factor GO=Molecular Function: translation release factor activity (GO:0003747), Biological Process: translational termination (GO:0006415))
PEPTIDE CHAIN RELEASE FACTOR 1 (db=HMMPanther db_id=PTHR11075:SF9 from=1 to=216 evalue=2.4e-88)
ACD40_54_4

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comp(3849..4130)
DNA (282bp) protein (94aa)
hypothetical protein
50S ribosomal protein L31 n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GGF5_9FIRM (db=UNIREF evalue=4.0e-16 bit_score=87.0 identity=63.16 coverage=59.5744680851064)
seg (db=Seg db_id=seg from=58 to=76)
RIBOSOMAL_L31 (db=PatternScan db_id=PS01143 from=34 to=55 evalue=0.0 interpro_id=IPR002150 interpro_description=Ribosomal protein L31 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD40_54_5

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4221..4511
DNA (291bp) protein (97aa)
4221..4511 + (rbs_motif=ATA rbs_spacer=3bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD79750.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD40_54_6

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comp(4481..5401)
DNA (921bp) protein (307aa)
DMT family permease
transmembrane_regions (db=TMHMM db_id=tmhmm from=129 to=146)
transmembrane_regions (db=TMHMM db_id=tmhmm from=156 to=175)
transmembrane_regions (db=TMHMM db_id=tmhmm from=187 to=206)
ACD40_54_7
GWA2_OP11_46_16_partial, Microgenomates, Bacteria

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comp(5404..6375)
DNA (972bp) protein (324aa)
sodium/calcium exchange protein
Na+/Ca+ antiporter, CaCA family n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=D2Z4X3_9BACT (db=UNIREF evalue=3.0e-22 bit_score=109.0 identity=33.77 coverage=66.9753086419753)
seg (db=Seg db_id=seg from=281 to=301)
seg (db=Seg db_id=seg from=255 to=270)
ACD40_54_8

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comp(6383..7591)
DNA (1209bp) protein (403aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidyl-tRNA synthetase (db=HMMPIR db_id=PIRSF001549 from=3 to=402 evalue=5.8e-111 interpro_id=IPR004516 interpro_description=Histidyl-tRNA synthetase, class IIa GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: histidine-tRNA ligase activity (GO:0004821), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: histidyl-tRNA aminoacylation (GO:0006427))
hisS: histidyl-tRNA synthetase (db=HMMTigr db_id=TIGR00442 from=7 to=394 evalue=6.6e-111 interpro_id=IPR015807 interpro_description=Histidyl-tRNA synthetase, class IIa, subgroup GO=Molecular Function: histidine-tRNA ligase activity (GO:0004821), Molecular Function: ATP binding (GO:0005524), Biological Process: translation (GO:0006412), Biological Process: histidyl-tRNA aminoacylation (GO:0006427))
HISTIDYL-TRNA SYNTHETASE (db=HMMPanther db_id=PTHR11476 from=6 to=402 evalue=2.0e-101 interpro_id=IPR004516 interpro_description=Histidyl-tRNA synthetase, class IIa GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: histidine-tRNA ligase activity (GO:0004821), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: histidyl-tRNA aminoacylation (GO:0006427))
ACD40_54_9

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comp(7600..8244)
DNA (645bp) protein (215aa)
Putative uncharacterized protein n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L9E4_RUMHA (db=UNIREF evalue=1.0e-08 bit_score=63.5 identity=24.27 coverage=91.6279069767442)
Uncharacterized protein {ECO:0000313|EMBL:EKD79754.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD40_54_10

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comp(8241..8669)
DNA (429bp) protein (143aa)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=19 evalue=5.0)
Uncharacterized protein {ECO:0000313|EMBL:EKD79755.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD40_54_11

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comp(8693..9883)
DNA (1191bp) protein (397aa)
seg (db=Seg db_id=seg from=324 to=337)
Uncharacterized protein {ECO:0000313|EMBL:EKD79756.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 11 items

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