ggKbase home page

ACD40_60

Alias: ACD40_11110.9823.28

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD40_60_1

Not on your lists

1..1305
DNA (1305bp) protein (435aa)
hypothetical protein
hypothetical protein
60 kDa chaperonin 2 n=2 Tax=Roseiflexus RepID=CH602_ROSS1 (db=UNIREF evalue=7.0e-137 bit_score=490.0 identity=57.21 coverage=99.0804597701149)
CHAPERONINS_CPN60 (db=PatternScan db_id=PS00296 from=297 to=308 evalue=0.0 interpro_id=IPR018370 interpro_description=Chaperonin Cpn60, conserved site GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: protein folding (GO:0006457))
ACD40_60_2
GWA2_OP11_42_17, Collierbacteria, Microgenomates, Bacteria

Not on your lists

comp(1499..2032)
DNA (534bp) protein (178aa)
nlpD; putative lipoprotein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
Duplicated hybrid motif (db=superfamily db_id=SSF51261 from=39 to=169 evalue=4.8e-32 interpro_id=IPR011055 interpro_description=Duplicated hybrid motif)
Peptidase_M23 (db=HMMPfam db_id=PF01551 from=70 to=165 evalue=1.0e-24 interpro_id=IPR016047 interpro_description=Peptidase M23)
ACD40_60_3

Not on your lists

2120..2272
DNA (153bp) protein (51aa)
2120..2272 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD80728.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD40_60_4

Not on your lists

comp(2930..3070)
DNA (141bp) protein (47aa)
2930..3070 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD80729.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD40_60_5
GWA2_OP11_42_17, Collierbacteria, Microgenomates, Bacteria

Not on your lists

4048..4536
DNA (489bp) protein (163aa)
Glyceraldehyde-3-phosphate dehydrogenase (Phosphorylating) n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KRX6_9BACT (db=UNIREF evalue=3.0e-52 bit_score=206.0 identity=60.38 coverage=96.9325153374233)
Glyceraldehyde-3-phosphate dehydrogenase, type I
GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE (db=HMMPanther db_id=PTHR10836 from=1 to=158 evalue=1.9e-66 interpro_id=IPR000173 interpro_description=Glyceraldehyde 3-phosphate dehydrogenase subfamily GO=Molecular Function: glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity (GO:0004365), Biological Process: glucose metabolic process (GO:0006006), Molecular Function: NAD or NADH binding (GO:0051287), Biological Process: oxidation reduction (GO:0055114))
GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE (db=HMMPanther db_id=PTHR10836:SF4 from=1 to=158 evalue=1.9e-66)
ACD40_60_6

Not on your lists

comp(4542..5174)
DNA (633bp) protein (211aa)
Putative uncharacterized protein n=1 Tax=Bacillus thuringiensis serovar kurstaki str. T03a001 RepID=C3ELG1_BACTK (db=UNIREF evalue=9.0e-13 bit_score=77.0 identity=31.25 coverage=82.9383886255924)
hypothetical protein
Homing endonucleases (db=superfamily db_id=SSF55608 from=101 to=151 evalue=5.8e-07)
INTEIN (db=FPrintScan db_id=PR00379 from=108 to=120 evalue=8.5e-05 interpro_id=IPR006142 interpro_description=Intein GO=Biological Process: intein-mediated protein splicing (GO:0016539))
ACD40_60_7

Not on your lists

comp(5376..5513)
DNA (138bp) protein (46aa)
5376..5513 - (rbs_motif=ATA rbs_spacer=7bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD80725.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD40_60_8
GWA2_OP11_42_17, Collierbacteria, Microgenomates, Bacteria

Not on your lists

6111..6473
DNA (363bp) protein (121aa)
SH3_3 (db=HMMPfam db_id=PF08239 from=65 to=115 evalue=5.3e-10 interpro_id=IPR013247 interpro_description=SH3, type 3)
hypothetical protein Tax=GWA2_OP11_42_17
ACD40_60_9
GWA2_OP11_42_17, Collierbacteria, Microgenomates, Bacteria

Not on your lists

comp(6478..7410)
DNA (933bp) protein (311aa)
Phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase
UbiA prenyltransferase n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C133_SPHTD (db=UNIREF evalue=3.0e-43 bit_score=179.0 identity=40.65 coverage=82.9581993569132)
transmembrane_regions (db=TMHMM db_id=tmhmm from=290 to=309)
transmembrane_regions (db=TMHMM db_id=tmhmm from=36 to=58)
ACD40_60_10
GWA2_OP11_42_17, Collierbacteria, Microgenomates, Bacteria

Not on your lists

comp(7377..8450)
DNA (1074bp) protein (358aa)
UDP-phosphate alpha-N-acetylglucosaminyltransferase
UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase n=1 Tax=Megamonas hypermegale ART12/1 RepID=D4KHN4_9FIRM (db=UNIREF evalue=9.0e-30 bit_score=134.0 identity=31.55 coverage=86.8715083798883)
transmembrane_regions (db=TMHMM db_id=tmhmm from=245 to=267)
transmembrane_regions (db=TMHMM db_id=tmhmm from=333 to=352)
ACD40_60_11

Not on your lists

comp(8447..8794)
DNA (348bp) protein (116aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=32)
transmembrane_regions (db=TMHMM db_id=tmhmm from=56 to=78)
transmembrane_regions (db=TMHMM db_id=tmhmm from=91 to=113)
Uncharacterized protein {ECO:0000313|EMBL:EKD80723.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD40_60_12

Not on your lists

comp(8823..9875)
DNA (1053bp) protein (351aa)
hypothetical protein
hypothetical protein cdiviTM7_00321 n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B25AF (db=UNIREF evalue=8.0e-44 bit_score=181.0 identity=28.49 coverage=98.8603988603989)
transmembrane_regions (db=TMHMM db_id=tmhmm from=307 to=329)
transmembrane_regions (db=TMHMM db_id=tmhmm from=273 to=292)
Displaying 12 items

View Taxonomy