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ACD40_61

Alias: ACD40_67274.13544.14

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD40_61_1

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comp(3..752)
DNA (750bp) protein (250aa)
L-lactate dehydrogenase
seg (db=Seg db_id=seg from=161 to=171)
coiled-coil (db=Coil db_id=coil from=27 to=48 evalue=NA)
L_LDH (db=PatternScan db_id=PS00064 from=176 to=182 evalue=0.0 interpro_id=IPR018177 interpro_description=L-lactate dehydrogenase, active site GO=Molecular Function: L-lactate dehydrogenase activity (GO:0004459), Biological Process: oxidation reduction (GO:0055114))
ACD40_61_2
GWA2_OP11_46_16_partial, Microgenomates, Bacteria

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988..1524
DNA (537bp) protein (179aa)
cytidylate kinase
Cytidylate_kin (db=HMMPfam db_id=PF02224 from=33 to=171 evalue=6.0e-42 interpro_id=IPR011994 interpro_description=Cytidylate kinase domain GO=Molecular Function: cytidylate kinase activity (GO:0004127), Molecular Function: ATP binding (GO:0005524), Biological Process: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process (GO:0006139))
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=36 to=176 evalue=4.7e-37)
CYTIDYLATE KINASE (CK) (CYTIDINE MONOPHOSPHATE KINASE) (CMP KINASE) (db=HMMPanther db_id=PTHR21299:SF2 from=36 to=177 evalue=3.7e-35 interpro_id=IPR003136 interpro_description=Cytidylate kinase GO=Molecular Function: cytidylate kinase activity (GO:0004127), Molecular Function: ATP binding (GO:0005524), Biological Process: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process (GO:0006139))
ACD40_61_3

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comp(2545..3024)
DNA (480bp) protein (160aa)
seg (db=Seg db_id=seg from=17 to=28)
Uncharacterized protein {ECO:0000313|EMBL:EKD79951.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD40_61_4
GWA2_OP11_46_16_partial, Microgenomates, Bacteria

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comp(4163..5320)
DNA (1158bp) protein (386aa)
Glycoside hydrolase family 18
seg (db=Seg db_id=seg from=129 to=137)
seg (db=Seg db_id=seg from=357 to=368)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
ACD40_61_5

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comp(5310..6482)
DNA (1173bp) protein (391aa)
hypothetical protein
beta-lactamase/transpeptidase-like (db=superfamily db_id=SSF56601 from=1 to=357 evalue=3.3e-75 interpro_id=IPR012338 interpro_description=Beta-lactamase-type transpeptidase fold)
no description (db=Gene3D db_id=G3DSA:3.40.710.10 from=16 to=283 evalue=9.8e-31)
Transpeptidase (db=HMMPfam db_id=PF00905 from=17 to=254 evalue=4.9e-17 interpro_id=IPR001460 interpro_description=Penicillin-binding protein, transpeptidase GO=Molecular Function: penicillin binding (GO:0008658), Biological Process: peptidoglycan-based cell wall biogenesis (GO:0009273))
ACD40_61_6
GWA2_OP11_46_16_partial, Microgenomates, Bacteria

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7644..8270
DNA (627bp) protein (209aa)
cytidylate kinase; K00945 cytidylate kinase [EC:2.7.4.14] (db=KEGG evalue=9.0e-13 bit_score=76.6 identity=29.17 coverage=79.4258373205742)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=9 to=169 evalue=5.3e-14)
hypothetical protein Tax=GWA2_OP11_46_16_partial
cytidylate kinase; K00945 cytidylate kinase [EC:2.7.4.14] alias=ACD40_67274.13544.14G0006,ACD40_67274.13544.14_6,ACD40_C00061G00006 id=52016 tax=ACD40 species=Archaeoglobus profundus genus=Archaeoglobus taxon_order=Archaeoglobales taxon_class=Archaeoglobi phylum=Euryarchaeota organism_group=OP11 organism_desc=OP11
ACD40_61_7

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8312..9547
DNA (1236bp) protein (412aa)
peptidase M20A family protein
seg (db=Seg db_id=seg from=375 to=387)
ACETYLORNITHINE DEACETYLASE (db=HMMPanther db_id=PTHR11014:SF5 from=23 to=409 evalue=2.2e-57)
PEPTIDASE M20 FAMILY MEMBER (db=HMMPanther db_id=PTHR11014 from=23 to=409 evalue=2.2e-57)
ACD40_61_8

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9551..10108
DNA (558bp) protein (186aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
seg (db=Seg db_id=seg from=5 to=19)
Uncharacterized protein {ECO:0000313|EMBL:EKD79948.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD40_61_9

Not on your lists

10258..11430
DNA (1173bp) protein (391aa)
10258..11430 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD79949.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD40_61_10

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11565..12023
DNA (459bp) protein (153aa)
ATP-cone domain-containing protein
coiled-coil (db=Coil db_id=coil from=81 to=102 evalue=NA)
TIGR00244: transcriptional regulator NrdR (db=HMMTigr db_id=TIGR00244 from=1 to=147 evalue=6.0e-51 interpro_id=IPR003796 interpro_description=Ribonucleotide reductase regulator NrdR-like)
ATP-cone (db=HMMPfam db_id=PF03477 from=49 to=135 evalue=3.4e-17 interpro_id=IPR005144 interpro_description=ATP-cone)
ACD40_61_11

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13058..13582
DNA (525bp) protein (175aa)
ribonucleotide reductase (EC:1.17.4.1)
Ribonuc_red_lgC (db=HMMPfam db_id=PF02867 from=1 to=171 evalue=1.5e-40 interpro_id=IPR000788 interpro_description=Ribonucleotide reductase large subunit, C-terminal GO=Molecular Function: ribonucleoside-diphosphate reductase activity (GO:0004748), Cellular Component: ribonucleoside-diphosphate reductase complex (GO:0005971), Biological Process: DNA replication (GO:0006260))
no description (db=Gene3D db_id=G3DSA:3.90.244.10 from=1 to=171 evalue=7.4e-35)
PFL-like glycyl radical enzymes (db=superfamily db_id=SSF51998 from=1 to=171 evalue=8.1e-34)
Displaying 11 items

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