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ACD40_75

Alias: ACD40_56924.3732.11

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD40_75_1

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539..1039
DNA (501bp) protein (167aa)
GntR family transcriptional regulator
PLP-dependent transferases (db=superfamily db_id=SSF53383 from=1 to=162 evalue=6.9e-40 interpro_id=IPR015424 interpro_description=Pyridoxal phosphate-dependent transferase, major domain)
SUBGROUP I AMINOTRANSFERASE RELATED (db=HMMPanther db_id=PTHR11751 from=2 to=162 evalue=3.8e-38)
AMINOTRANSFERASE RELATED (db=HMMPanther db_id=PTHR11751:SF17 from=2 to=162 evalue=3.8e-38)
ACD40_75_2

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1036..1200
DNA (165bp) protein (55aa)
1036..1200 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD80000.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD40_75_3
Microgenomates bacterium GW2011_GWB1_46_7, Microgenomates, Bacteria

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1373..1930
DNA (558bp) protein (186aa)
DNA protecting protein DprA
hypothetical protein CATMIT_00487 n=1 Tax=Catenibacterium mitsuokai DSM 15897 RepID=UPI000196B990 (db=UNIREF evalue=2.0e-26 bit_score=122.0 identity=46.04 coverage=73.1182795698925)
seg (db=Seg db_id=seg from=144 to=156)
DNA_processg_A (db=HMMPfam db_id=PF02481 from=2 to=145 evalue=6.3e-50 interpro_id=IPR003488 interpro_description=DNA recombination-mediator protein A GO=Biological Process: DNA mediated transformation (GO:0009294))
ACD40_75_4

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1958..2068
DNA (111bp) protein (37aa)
1958..2068 + (rbs_motif=ATA rbs_spacer=5bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD79997.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD40_75_5

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2065..2658
DNA (594bp) protein (198aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29)
seg (db=Seg db_id=seg from=139 to=154)
PEPT_TRNA_HYDROL_1 (db=PatternScan db_id=PS01195 from=14 to=27 evalue=0.0 interpro_id=IPR018171 interpro_description=Peptidyl-tRNA hydrolase, conserved site GO=Molecular Function: aminoacyl-tRNA hydrolase activity (GO:0004045), Biological Process: translation (GO:0006412))
Pept_tRNA_hydro (db=HMMPfam db_id=PF01195 from=3 to=191 evalue=6.0e-51 interpro_id=IPR001328 interpro_description=Peptidyl-tRNA hydrolase GO=Molecular Function: aminoacyl-tRNA hydrolase activity (GO:0004045), Biological Process: translation (GO:0006412))
ACD40_75_6

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3352..3768
DNA (417bp) protein (139aa)
DNA topoisomerase n=2 Tax=Campylobacter RepID=B9D4S3_WOLRE (db=UNIREF evalue=2.0e-32 bit_score=141.0 identity=50.68 coverage=97.841726618705)
hypothetical protein
TOPOISOMERASE_I_PROK (db=PatternScan db_id=PS00396 from=79 to=93 evalue=0.0 interpro_id=IPR000380 interpro_description=DNA topoisomerase, type IA, core GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA topoisomerase type I activity (GO:0003917), Cellular Component: chromosome (GO:0005694), Biological Process: DNA topological change (GO:0006265))
Topoisom_bac (db=HMMPfam db_id=PF01131 from=16 to=139 evalue=3.5e-34 interpro_id=IPR013497 interpro_description=DNA topoisomerase, type IA, central GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA topoisomerase activity (GO:0003916), Cellular Component: chromosome (GO:0005694), Biological Process: DNA topological change (GO:0006265))
Displaying 6 items

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