ggKbase home page

ACD40_78

Alias: ACD40_36851.5292.18

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD40_78_1
Microgenomates bacterium GW2011_GWF2_46_18, Microgenomates, Bacteria

Not on your lists

1128..1331
DNA (204bp) protein (68aa)
1128..1331 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:KKU27893.1}; TaxID=1618540 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWF2_46_18.;"
ACD40_78_2
GWC1_OP11_46_16, Microgenomates, Bacteria

Not on your lists

comp(1557..1928)
DNA (372bp) protein (124aa)
smpB; SsrA-binding protein
seg (db=Seg db_id=seg from=10 to=19)
seg (db=Seg db_id=seg from=90 to=104)
smpB: SsrA-binding protein (db=HMMTigr db_id=TIGR00086 from=1 to=122 evalue=7.2e-39 interpro_id=IPR000037 interpro_description=SsrA-binding protein GO=Molecular Function: RNA binding (GO:0003723), Biological Process: translation (GO:0006412))
ACD40_78_3

Not on your lists

comp(2080..2907)
DNA (828bp) protein (276aa)
YWTD domain (db=superfamily db_id=SSF63825 from=42 to=264 evalue=7.0e-07)
Uncharacterized protein {ECO:0000313|EMBL:EKD80334.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD40_78_4
Microgenomates bacterium GW2011_GWF2_46_18, Microgenomates, Bacteria

Not on your lists

comp(3879..4106)
DNA (228bp) protein (76aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
transmembrane_regions (db=TMHMM db_id=tmhmm from=52 to=74)
Uncharacterized protein {ECO:0000313|EMBL:KKU27896.1}; TaxID=1618540 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWF2_46_18.;"
ACD40_78_5
Microgenomates bacterium GW2011_GWA1_46_7, Microgenomates, Bacteria

Not on your lists

comp(4107..4721)
DNA (615bp) protein (205aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=90 to=112)
transmembrane_regions (db=TMHMM db_id=tmhmm from=53 to=75)
DUF304 (db=HMMPfam db_id=PF03703 from=108 to=183 evalue=3.6e-06 interpro_id=IPR005182 interpro_description=Protein of unknown function DUF304, transmembrane flanked domain, bacterial)
Uncharacterized protein {ECO:0000313|EMBL:KKU44299.1}; TaxID=1618495 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWA1_46_7.;"
ACD40_78_6
Microgenomates bacterium GW2011_GWA1_46_7, Microgenomates, Bacteria

Not on your lists

comp(4749..5330)
DNA (582bp) protein (194aa)
seg (db=Seg db_id=seg from=130 to=142)
Uncharacterized protein {ECO:0000313|EMBL:KKU44300.1}; TaxID=1618495 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWA1_46_7.;"
SpoIID/LytB protein
Displaying 6 items

View Taxonomy