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ACD40_112

Alias: ACD40_99910.8200.13

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD40_112_1

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3..437
DNA (435bp) protein (145aa)
hypothetical protein
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=38 to=125 evalue=1.2e-13 interpro_id=IPR012337 interpro_description=Polynucleotidyl transferase, ribonuclease H fold GO=Molecular Function: nucleic acid binding (GO:0003676))
hypothetical protein alias=ACD40_99910.8200.13G0001,ACD40_99910.8200.13_1,ACD40_C00112G00001 id=52401 tax=ACD40 species=Legionella pneumophila genus=Legionella taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria organism_group=OP11 organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:EKD79741.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD40_112_2

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comp(397..567)
DNA (171bp) protein (57aa)
397..567 - (rbs_motif=ATA rbs_spacer=10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD79742.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD40_112_3
GWA2_OP11_46_16_partial, Microgenomates, Bacteria

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1156..1272
DNA (117bp) protein (39aa)
1156..1272 + (rbs_motif=None rbs_spacer=None)
Non-canonical purine NTP pyrophosphatase Tax=GWA2_OP11_46_16_partial
ACD40_112_4

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comp(1285..1986)
DNA (702bp) protein (234aa)
tRNA pseudouridine synthase B n=2 Tax=Bacteria RepID=C3RL16_9MOLU (db=UNIREF evalue=7.0e-37 bit_score=157.0 identity=39.55 coverage=92.7350427350427)
tRNA pseudouridine synthase B
TruB: tRNA pseudouridine synthase B (db=HMMTigr db_id=TIGR00431 from=10 to=221 evalue=1.7e-57 interpro_id=IPR014780 interpro_description=Pseudouridine synthase II, TruB, N-terminal, bacterial-type GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982))
Pseudouridine synthase (db=superfamily db_id=SSF55120 from=8 to=224 evalue=1.2e-56 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982))
ACD40_112_5
GWA2_OP11_46_16_partial, Microgenomates, Bacteria

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1993..3360
DNA (1368bp) protein (456aa)
hypothetical protein
seg (db=Seg db_id=seg from=301 to=310)
seg (db=Seg db_id=seg from=280 to=292)
seg (db=Seg db_id=seg from=195 to=217)
ACD40_112_6

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3357..4172
DNA (816bp) protein (272aa)
restriction endonuclease
Restriction endonuclease-like (db=superfamily db_id=SSF52980 from=86 to=214 evalue=9.5e-22 interpro_id=IPR011335 interpro_description=Restriction endonuclease, type II-like GO=Molecular Function: DNA binding (GO:0003677))
no description (db=Gene3D db_id=G3DSA:3.40.91.40 from=94 to=214 evalue=5.5e-19 interpro_id=IPR012311 interpro_description=Nuclease, putative, AF1548, N-terminal)
Mrr_cat (db=HMMPfam db_id=PF04471 from=96 to=194 evalue=1.2e-07 interpro_id=IPR007560 interpro_description=Restriction endonuclease, type IV-like, Mrr GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: endonuclease activity (GO:0004519), Biological Process: DNA restriction-modification system (GO:0009307))
ACD40_112_7

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4154..5524
DNA (1371bp) protein (457aa)
signal peptidase I
seg (db=Seg db_id=seg from=401 to=419)
seg (db=Seg db_id=seg from=45 to=51)
seg (db=Seg db_id=seg from=6 to=21)
ACD40_112_8
GWA2_OP11_46_16_partial, Microgenomates, Bacteria

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5543..6136
DNA (594bp) protein (198aa)
Superoxide dismutase (EC:1.15.1.1)
seg (db=Seg db_id=seg from=105 to=121)
SOD_MN (db=PatternScan db_id=PS00088 from=162 to=169 evalue=0.0 interpro_id=IPR019833 interpro_description=Manganese/iron superoxide dismutase, binding site GO=Molecular Function: superoxide dismutase activity (GO:0004784), Biological Process: superoxide metabolic process (GO:0006801), Molecular Function: metal ion binding (GO:0046872), Biological Process: oxidation reduction (GO:0055114))
Superoxide dismutase, Mn/Fe specific (db=HMMPIR db_id=PIRSF000349 from=4 to=197 evalue=2.4e-81 interpro_id=IPR001189 interpro_description=Manganese/iron superoxide dismutase GO=Molecular Function: superoxide dismutase activity (GO:0004784), Biological Process: superoxide metabolic process (GO:0006801), Molecular Function: metal ion binding (GO:0046872), Biological Process: oxidation reduction (GO:0055114))
ACD40_112_9

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comp(6158..7042)
DNA (885bp) protein (295aa)
seg (db=Seg db_id=seg from=272 to=294)
transmembrane_regions (db=TMHMM db_id=tmhmm from=271 to=293)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=20 to=29)
ACD40_112_10

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comp(7039..8238)
DNA (1200bp) protein (400aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=57 to=79)
seg (db=Seg db_id=seg from=1 to=13)
seg (db=Seg db_id=seg from=15 to=29)
seg (db=Seg db_id=seg from=70 to=83)
Displaying 10 items

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