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ACD40_46_22

Organism: ACD40

partial RP 43 / 55 MC: 9 BSCG 39 / 51 MC: 3 ASCG 0 / 38
Location: comp(16346..17242)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 44.9
  • Coverage: 301.0
  • Bit_score: 241
  • Evalue 2.80e-61
rpoA: DNA-directed RNA polymerase, alpha sub (db=HMMTigr db_id=TIGR02027 from=17 to=298 evalue=1.6e-82 interpro_id=IPR011773 interpro_description=DNA-directed RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.60e-82
no description (db=HMMSmart db_id=SM00662 from=17 to=222 evalue=4.8e-64 interpro_id=IPR011263 interpro_description=DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: HMMSmart
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 4.80e-64

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 897
ATGCAAACCATGAATTTTTCGGTCAAAACCATTGAAGAAAAGGATAACTTTGGCATTTTTGCCATTGAACCTCTAGTGACTGGTTTTGGTCATACGCTCGGTAACTCACTACGCCGAATTTTACTGTCTAGTTTTCGCGGCGCTGCCATCACCGAAGTTAAAGTAGGAGGGGTAACTCACAAATTTTCTACCCTCGCTGGTTTAAGTGAGGATATGATCGAACTAATCTTAAACCTTAAGGCTATTAAAGTCGCCTATGAGGGGGAAGAGTCCATTACCGCCAAATTAAACGTTAAAGGTGCCAAAACTGTGCATGCAAGTGATATCGTCGCTCCTGCGACCGTGAAAATCGTCAACGGTGATGCCATTATTGCCAACTTAAGTAAAGACGCTAAACTCGATCTCGAACTAACCATTGCTACCGGTTATGGTTATTCACCTGCAGAAGATCGACCAACCACCACAATTGGCACCATGGTGCTTGATGCCATTTTTTCCCCCGTTGAACGCGTTTCCTACAAAGTCGAGTCAACTCGTGTTGGTCGCCGCACTGATTTTGACAAAATTGTTCTGGAAATCCACACTGACGGTTCCCAGCTCCCTTCCCTCGTCTTAAAGGAAGCCGCTAAAATTTTAGTTTCGGCTTTTTCTCAAATTGTTGAGCCGGTTGCCATAGTTGGTGACGAGAATGCATCTACAAGCCCCTCAAGTATTTCTCTGGATGACCTTGGTCTCCCCACTCGAGTGACCAATGCTCTTAAGAATGCCGGCTACAAACAGGTCGAGCAACTAGCATCCGCCACAGATCGAGATCTTAAAAATGTCAAAAATCTAGGTGGTAAATCACTTGGATTAGTCGATGAAGCATTAGCCACCAAAGGACTTAAACGCGCATGA
PROTEIN sequence
Length: 299
MQTMNFSVKTIEEKDNFGIFAIEPLVTGFGHTLGNSLRRILLSSFRGAAITEVKVGGVTHKFSTLAGLSEDMIELILNLKAIKVAYEGEESITAKLNVKGAKTVHASDIVAPATVKIVNGDAIIANLSKDAKLDLELTIATGYGYSPAEDRPTTTIGTMVLDAIFSPVERVSYKVESTRVGRRTDFDKIVLEIHTDGSQLPSLVLKEAAKILVSAFSQIVEPVAIVGDENASTSPSSISLDDLGLPTRVTNALKNAGYKQVEQLASATDRDLKNVKNLGGKSLGLVDEALATKGLKRA*