Alias: ACD40_17618.22185.15
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACD40_46_1
uncultured bacterium, Bacteria
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Not on your lists |
comp(1..471)
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hypothetical protein
coiled-coil (db=Coil db_id=coil from=44 to=65 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=13 to=32)
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ACD40_46_2
uncultured bacterium, Bacteria
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Not on your lists |
508..1104
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
Acid proteases (db=superfamily db_id=SSF50630 from=80 to=185 evalue=2.1e-06 interpro_id=IPR021109 interpro_description=Peptidase aspartic)
RVP (db=HMMPfam db_id=PF00077 from=82 to=175 evalue=6.3e-06 interpro_id=IPR018061 interpro_description=Peptidase A2A, retrovirus RVP subgroup)
ASP_PROT_RETROV (db=ProfileScan db_id=PS50175 from=99 to=176 evalue=8.736 interpro_id=IPR001995 interpro_description=Peptidase A2A, retrovirus, catalytic GO=Molecular Function: aspartic-type endopeptidase activity (GO:0004190), Biological Process: proteolysis (GO:0006508))
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ACD40_46_3
uncultured bacterium, Bacteria
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Not on your lists |
1107..1928
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seg (db=Seg db_id=seg from=54 to=68)
seg (db=Seg db_id=seg from=18 to=37)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
E set domains (db=superfamily db_id=SSF81296 from=66 to=152 evalue=1.3e-12 interpro_id=IPR014756 interpro_description=Immunoglobulin E-set)
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ACD40_46_4
uncultured bacterium, Bacteria
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Not on your lists |
comp(1925..2707)
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uppP; undecaprenyl pyrophosphate phosphatase (EC:3.6.1.27)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=248 to=258)
transmembrane_regions (db=TMHMM db_id=tmhmm from=44 to=66)
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ACD40_46_5
GWA2_OP11_46_16_partial, Microgenomates, Bacteria
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Not on your lists |
comp(2714..3406)
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hypothetical protein
seg (db=Seg db_id=seg from=123 to=140)
seg (db=Seg db_id=seg from=28 to=42)
transmembrane_regions (db=TMHMM db_id=tmhmm from=186 to=208)
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ACD40_46_6
uncultured bacterium, Bacteria
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Not on your lists |
comp(3423..4418)
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hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=202 to=224)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
transmembrane_regions (db=TMHMM db_id=tmhmm from=68 to=90)
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ACD40_46_7
GWA2_OP11_46_16_partial, Microgenomates, Bacteria
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Not on your lists |
comp(4378..5250)
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tRNA delta(2)-isopentenylpyrophosphate transferase
IPPT (db=HMMPfam db_id=PF01715 from=37 to=280 evalue=1.9e-39 interpro_id=IPR002627 interpro_description=tRNA isopentenyltransferase GO=Molecular Function: tRNA isopentenyltransferase activity (GO:0004811), Molecular Function: ATP binding (GO:0005524), Biological Process: tRNA processing (GO:0008033))
miaA: tRNA delta(2)-isopentenylpyrophosphate (db=HMMTigr db_id=TIGR00174 from=4 to=283 evalue=5.6e-31 interpro_id=IPR018022 interpro_description=tRNA delta(2)-isopentenylpyrophosphate transferase)
TRNA DELTA(2)-ISOPENTENYLPYROPHOSPHATE TRANSFERASE-RELATED (db=HMMPanther db_id=PTHR11088 from=35 to=282 evalue=9.2e-27 interpro_id=IPR002627 interpro_description=tRNA isopentenyltransferase GO=Molecular Function: tRNA isopentenyltransferase activity (GO:0004811), Molecular Function: ATP binding (GO:0005524), Biological Process: tRNA processing (GO:0008033))
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ACD40_46_8
GWA2_OP11_46_16_partial, Microgenomates, Bacteria
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Not on your lists |
comp(5253..5924)
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hypothetical protein
ABC-2 type transporter n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HZK0_9BACT (db=UNIREF evalue=3.0e-23 bit_score=112.0 identity=39.04 coverage=83.0357142857143)
seg (db=Seg db_id=seg from=140 to=152)
seg (db=Seg db_id=seg from=10 to=29)
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ACD40_46_9
GWA2_OP11_46_16_partial, Microgenomates, Bacteria
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Not on your lists |
comp(6028..6948)
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ybhF_2; ABC-type multidrug transport system ATPase component
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=133 to=147 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=4 to=247 evalue=1.1e-72)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=4 to=258 evalue=5.5e-57)
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ACD40_46_10
GWA2_OP11_46_16_partial, Microgenomates, Bacteria
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Not on your lists |
comp(6971..7498)
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S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=5 to=59 evalue=4.9e-06)
Uncharacterized protein {ECO:0000313|EMBL:KKU26360.1}; TaxID=1618501 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWA2_46_16.;"
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ACD40_46_11
GWA2_OP11_46_16_partial, Microgenomates, Bacteria
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Not on your lists |
comp(7614..8405)
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hypothetical protein
seg (db=Seg db_id=seg from=254 to=263)
seg (db=Seg db_id=seg from=142 to=163)
transmembrane_regions (db=TMHMM db_id=tmhmm from=28 to=50)
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ACD40_46_12
uncultured bacterium, Bacteria
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Not on your lists |
comp(8407..9195)
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abc transporter integral membrane protein
seg (db=Seg db_id=seg from=153 to=163)
transmembrane_regions (db=TMHMM db_id=tmhmm from=22 to=44)
transmembrane_regions (db=TMHMM db_id=tmhmm from=228 to=250)
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ACD40_46_13
uncultured bacterium, Bacteria
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Not on your lists |
comp(9249..10193)
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ABC transporter related-protein n=1 Tax=bacterium Ellin514 RepID=B9XCQ4_9BACT (db=UNIREF evalue=3.0e-89 bit_score=332.0 identity=51.4 coverage=95.2380952380952)
ABC transporter ATPase
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=158 to=172 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
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ACD40_46_14
GWA2_OP11_46_16_partial, Microgenomates, Bacteria
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Not on your lists |
comp(10282..10557)
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Bac_DNA_binding (db=HMMPfam db_id=PF00216 from=1 to=89 evalue=1.6e-16 interpro_id=IPR000119 interpro_description=Histone-like bacterial DNA-binding protein GO=Molecular Function: DNA binding (GO:0003677))
IHF-like DNA-binding proteins (db=superfamily db_id=SSF47729 from=1 to=91 evalue=2.0e-14 interpro_id=IPR010992 interpro_description=IHF-like DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
no description (db=Gene3D db_id=G3DSA:4.10.520.10 from=1 to=90 evalue=2.9e-11 interpro_id=IPR000119 interpro_description=Histone-like bacterial DNA-binding protein GO=Molecular Function: DNA binding (GO:0003677))
no description (db=HMMSmart db_id=SM00411 from=1 to=91 evalue=1.5e-10 interpro_id=IPR000119 interpro_description=Histone-like bacterial DNA-binding protein GO=Molecular Function: DNA binding (GO:0003677))
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ACD40_46_15
GWA2_OP11_46_16_partial, Microgenomates, Bacteria
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Not on your lists |
comp(10581..12080)
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hypothetical protein
hypothetical protein
2',3'-cyclic-nucleotide 2'-phosphodiesterase n=29 Tax=Streptococcus RepID=CNPD_STRP2 (db=UNIREF evalue=1.0e-97 bit_score=360.0 identity=44.47 coverage=92.2)
coiled-coil (db=Coil db_id=coil from=64 to=99 evalue=NA)
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ACD40_46_16
GWC2_OP11_45_8_partial, Microgenomates, Bacteria
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Not on your lists |
comp(12233..12853)
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recX; regulatory protein RecX
RecX (db=HMMPfam db_id=PF02631 from=93 to=202 evalue=2.0e-23 interpro_id=IPR003783 interpro_description=Regulatory protein RecX GO=Biological Process: regulation of DNA repair (GO:0006282))
RecX (db=HAMAP db_id=MF_01114 from=42 to=206 evalue=14.011)
Regulatory protein RecX Tax=GWC2_OP11_45_8_partial
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ACD40_46_17
GWC2_OP11_45_8_partial, Microgenomates, Bacteria
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Not on your lists |
comp(12853..13932)
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recA protein
recA protein
RecA protein n=1 Tax=Clostridium cellulovorans 743B RepID=C5RMB8_CLOCL (db=UNIREF evalue=7.0e-116 bit_score=420.0 identity=65.85 coverage=90.0)
seg (db=Seg db_id=seg from=153 to=166)
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ACD40_46_18
GWC2_OP11_45_8_partial, Microgenomates, Bacteria
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Not on your lists |
comp(14011..14862)
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phage antirepressor protein
phage antirepressor protein
Putative uncharacterized protein n=1 Tax=Geobacter metallireducens GS-15 RepID=Q39WR3_GEOMG (db=UNIREF evalue=4.0e-92 bit_score=341.0 identity=63.74 coverage=94.7183098591549)
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ACD40_46_19
GWC2_OP11_45_8_partial, Microgenomates, Bacteria
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Not on your lists |
comp(14908..15108)
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30S ribosomal protein S9 n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GZX7_9FIRM (db=UNIREF evalue=6.0e-09 bit_score=63.2 identity=57.81 coverage=92.5373134328358)
Ribosomal_S9 (db=HMMPfam db_id=PF00380 from=2 to=66 evalue=4.0e-12 interpro_id=IPR000754 interpro_description=Ribosomal protein S9 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal protein S5 domain 2-like (db=superfamily db_id=SSF54211 from=3 to=66 evalue=6.0e-10 interpro_id=IPR020568 interpro_description=Ribosomal protein S5 domain 2-type fold)
no description (db=Gene3D db_id=G3DSA:3.30.230.10 from=3 to=66 evalue=2.0e-07 interpro_id=IPR014721 interpro_description=Ribosomal protein S5 domain 2-type fold, subgroup)
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ACD40_46_20
uncultured bacterium, Bacteria
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Not on your lists |
comp(15412..15846)
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50S ribosomal protein L13 n=1 Tax=Mitsuokella multacida DSM 20544 RepID=C9KJ59_9FIRM (db=UNIREF evalue=2.0e-38 bit_score=160.0 identity=51.41 coverage=97.2413793103448)
rplM; 50S ribosomal protein L13
rplM_bact: ribosomal protein L13 (db=HMMTigr db_id=TIGR01066 from=5 to=143 evalue=8.1e-67 interpro_id=IPR005823 interpro_description=Ribosomal protein L13, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
50S RIBOSOMAL PROTEIN L13 (db=HMMPanther db_id=PTHR11545:SF2 from=5 to=144 evalue=7.6e-51 interpro_id=IPR005823 interpro_description=Ribosomal protein L13, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD40_46_21
uncultured bacterium, Bacteria
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Not on your lists |
comp(15843..16349)
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rplQ; 50S ribosomal protein L17
seg (db=Seg db_id=seg from=116 to=133)
RIBOSOMAL_L17 (db=PatternScan db_id=PS01167 from=34 to=56 evalue=0.0 interpro_id=IPR000456 interpro_description=Ribosomal protein L17 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
L17: ribosomal protein L17 (db=HMMTigr db_id=TIGR00059 from=7 to=117 evalue=4.8e-35 interpro_id=IPR000456 interpro_description=Ribosomal protein L17 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD40_46_22
uncultured bacterium, Bacteria
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Not on your lists |
comp(16346..17242)
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DNA-directed RNA polymerase subunit alpha
rpoA: DNA-directed RNA polymerase, alpha sub (db=HMMTigr db_id=TIGR02027 from=17 to=298 evalue=1.6e-82 interpro_id=IPR011773 interpro_description=DNA-directed RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351))
no description (db=HMMSmart db_id=SM00662 from=17 to=222 evalue=4.8e-64 interpro_id=IPR011263 interpro_description=DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350))
Insert subdomain of RNA polymerase alpha subunit (db=superfamily db_id=SSF56553 from=47 to=166 evalue=2.6e-36 interpro_id=IPR011262 interpro_description=DNA-directed RNA polymerase, insert domain GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350), Molecular Function: protein dimerization activity (GO:0046983))
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ACD40_46_23
uncultured bacterium, Bacteria
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Not on your lists |
comp(17267..17875)
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30S ribosomal protein S4
seg (db=Seg db_id=seg from=21 to=28)
rpsD_bact: ribosomal protein S4 (db=HMMTigr db_id=TIGR01017 from=3 to=202 evalue=1.3e-84 interpro_id=IPR005709 interpro_description=Ribosomal protein S4, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
Alpha-L RNA-binding motif (db=superfamily db_id=SSF55174 from=2 to=202 evalue=9.5e-60)
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ACD40_46_24
GWA2_OP11_46_16_partial, Microgenomates, Bacteria
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Not on your lists |
comp(17877..18248)
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30S ribosomal protein S11
seg (db=Seg db_id=seg from=53 to=67)
bact_S11: 30S ribosomal protein S11 (db=HMMTigr db_id=TIGR03632 from=4 to=120 evalue=1.7e-57 interpro_id=IPR019981 interpro_description=Ribosomal protein S11, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 (db=HMMPanther db_id=PTHR11759 from=5 to=123 evalue=2.4e-52 interpro_id=IPR001971 interpro_description=Ribosomal protein S11 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD40_46_25
uncultured bacterium, Bacteria
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Not on your lists |
comp(18250..18645)
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30S ribosomal protein S13
bact_S13: 30S ribosomal protein S13 (db=HMMTigr db_id=TIGR03631 from=3 to=114 evalue=4.8e-56 interpro_id=IPR019980 interpro_description=Ribosomal protein S13, bacterial-type GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal protein, S13p/S13a/S18e/organellar S13 types (db=HMMPIR db_id=PIRSF002134 from=1 to=121 evalue=3.0e-46 interpro_id=IPR001892 interpro_description=Ribosomal protein S13 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
30S/40S RIBOSOMAL PROTEIN (db=HMMPanther db_id=PTHR10871 from=1 to=122 evalue=3.0e-44)
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ACD40_46_26
GWC2_OP11_45_8_partial, Microgenomates, Bacteria
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Not on your lists |
comp(18759..19010)
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infA; translation initiation factor IF-1
infA: translation initiation factor IF-1 (db=HMMTigr db_id=TIGR00008 from=3 to=71 evalue=4.9e-33 interpro_id=IPR004368 interpro_description=Translation initiation factor IF-1 GO=Molecular Function: translation initiation factor activity (GO:0003743), Biological Process: translational initiation (GO:0006413))
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=1 to=71 evalue=2.0e-26 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=1 to=71 evalue=6.6e-23 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold)
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ACD40_46_27
GWA2_OP11_46_16_partial, Microgenomates, Bacteria
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Not on your lists |
comp(19033..19788)
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methionine aminopeptidase (EC:3.4.11.18)
no description (db=Gene3D db_id=G3DSA:3.90.230.10 from=4 to=243 evalue=3.2e-53 interpro_id=IPR000994 interpro_description=Peptidase M24, structural domain GO=Biological Process: cellular process (GO:0009987))
Creatinase/aminopeptidase (db=superfamily db_id=SSF55920 from=4 to=243 evalue=3.9e-50 interpro_id=IPR000994 interpro_description=Peptidase M24, structural domain GO=Biological Process: cellular process (GO:0009987))
PROTEASE FAMILY M24 (METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P) (db=HMMPanther db_id=PTHR10804 from=50 to=243 evalue=9.4e-45 interpro_id=IPR000994 interpro_description=Peptidase M24, structural domain GO=Biological Process: cellular process (GO:0009987))
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ACD40_46_28
GWC2_OP11_45_8_partial, Microgenomates, Bacteria
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Not on your lists |
comp(19785..20360)
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adenylate kinase (EC:2.7.4.3)
ADENYLATE_KINASE (db=PatternScan db_id=PS00113 from=84 to=95 evalue=0.0 interpro_id=IPR000850 interpro_description=Adenylate kinase GO=Molecular Function: ATP binding (GO:0005524), Biological Process: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process (GO:0006139), Molecular Function: nucleobase, nucleoside, nucleotide kinase activity (GO:0019205))
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=4 to=189 evalue=7.5e-41)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=3 to=191 evalue=5.8e-38)
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ACD40_46_29
uncultured bacterium, Bacteria
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Not on your lists |
comp(20397..20597)
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putative periplasmic or secreted lipoprotein
YcfA (db=HMMPfam db_id=PF07927 from=11 to=63 evalue=1.3e-16 interpro_id=IPR012933 interpro_description=YcfA-like)
YcfA/nrd intein domain (db=superfamily db_id=SSF54786 from=3 to=63 evalue=1.7e-14 interpro_id=IPR015146 interpro_description=Ribonucleotide reductase, stirrup)
no description (db=Gene3D db_id=G3DSA:3.30.920.30 from=3 to=63 evalue=6.2e-13)
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ACD40_46_30
GWA2_OP11_46_16_partial, Microgenomates, Bacteria
|
Not on your lists |
comp(20575..20844)
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hypothetical protein
UPF0150 (db=HMMPfam db_id=PF03681 from=10 to=54 evalue=8.8e-19 interpro_id=IPR005357 interpro_description=Uncharacterised protein family UPF0150)
TTHA1013-like (db=superfamily db_id=SSF143100 from=8 to=77 evalue=4.4e-16)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=32 evalue=8.0)
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