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ACD40_46_25

Organism: ACD40

partial RP 43 / 55 MC: 9 BSCG 39 / 51 MC: 3 ASCG 0 / 38
Location: comp(18250..18645)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S13 similarity KEGG
DB: KEGG
  • Identity: 57.3
  • Coverage: 124.0
  • Bit_score: 149
  • Evalue 8.20e-34
bact_S13: 30S ribosomal protein S13 (db=HMMTigr db_id=TIGR03631 from=3 to=114 evalue=4.8e-56 interpro_id=IPR019980 interpro_description=Ribosomal protein S13, bacterial-type GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 4.80e-56
Ribosomal protein, S13p/S13a/S18e/organellar S13 types (db=HMMPIR db_id=PIRSF002134 from=1 to=121 evalue=3.0e-46 interpro_id=IPR001892 interpro_description=Ribosomal protein S13 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: HMMPIR
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.00e-46

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 396
ATGTTAAGACTAGTAGGTATCGATTTACCAGTTGACAAACGCATCGAAGTCGCCCTAACTTACGTCTACGGTATTGGCCCAAAAATTTCCCGGATTATCCTGGACAAAGCTAAAATTGACCTAAATACCCGCGCCAAAAACCTCTCCGCCTTGGAAGTCGCCAAACTCCAAAAAATCCTCGAAGAATTCAAAGTGGAAGGAGATCTCCGCAAGGATATTCGCGAAAACATCCAGCGCTTAAAGCGCATTGGTTGTTATCGGGGTTACCGTCACTCGGTCGGTCTCCCTGCTCATGGGCAGCGTACTCGTACCAACGCTCGTACTCTGCGGGGCAAACGTAAAACCATTGGCGCCATGAAAAAAGAAGAAACCGCCAAAATAGAGGGAGCCAAGTAA
PROTEIN sequence
Length: 132
MLRLVGIDLPVDKRIEVALTYVYGIGPKISRIILDKAKIDLNTRAKNLSALEVAKLQKILEEFKVEGDLRKDIRENIQRLKRIGCYRGYRHSVGLPAHGQRTRTNARTLRGKRKTIGAMKKEETAKIEGAK*