Alias: ACD41_20935.17088.17
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACD41_10_1
uncultured bacterium, Bacteria
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Not on your lists |
comp(3..1226)
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calcium-translocating P-type ATPase
calcium-translocating P-type ATPase
Calcium-translocating P-type ATPase, PMCA-type n=7 Tax=Thermoanaerobacter RepID=B0K4E0_THEPX (db=UNIREF evalue=5.0e-81 bit_score=305.0 identity=44.53 coverage=93.8725490196078)
seg (db=Seg db_id=seg from=257 to=268)
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ACD41_10_2
uncultured bacterium, Bacteria
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Not on your lists |
comp(1213..1416)
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transmembrane_regions (db=TMHMM db_id=tmhmm from=39 to=61)
Uncharacterized protein {ECO:0000313|EMBL:EKD79255.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD41_10_3
uncultured bacterium, Bacteria
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Not on your lists |
comp(1541..2197)
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hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=24 to=46)
transmembrane_regions (db=TMHMM db_id=tmhmm from=156 to=178)
transmembrane_regions (db=TMHMM db_id=tmhmm from=124 to=146)
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ACD41_10_4
uncultured bacterium, Bacteria
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Not on your lists |
2255..3598
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Replicative DNA helicase n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KSV0_9BACT (db=UNIREF evalue=2.0e-135 bit_score=486.0 identity=51.7 coverage=97.0982142857143)
replicative DNA helicase
replicative DNA helicase
DnaB: replicative DNA helicase (db=HMMTigr db_id=TIGR00665 from=4 to=443 evalue=2.4e-249 interpro_id=IPR007692 interpro_description=DNA helicase, DnaB type GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA helicase activity (GO:0003678), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA replication (GO:0006260))
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ACD41_10_5
uncultured bacterium, Bacteria
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Not on your lists |
3604..3918
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DUF149 (db=HMMPfam db_id=PF02575 from=8 to=92 evalue=4.0e-15 interpro_id=IPR004401 interpro_description=Uncharacterised protein family UPF0133)
YbaB-like (db=superfamily db_id=SSF82607 from=8 to=100 evalue=1.8e-13 interpro_id=IPR004401 interpro_description=Uncharacterised protein family UPF0133)
no description (db=Gene3D db_id=G3DSA:3.30.1310.10 from=1 to=99 evalue=8.4e-10 interpro_id=IPR004401 interpro_description=Uncharacterised protein family UPF0133)
Uncharacterized protein {ECO:0000313|EMBL:EKD79258.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD41_10_6
uncultured bacterium, Bacteria
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Not on your lists |
3918..4517
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recombination protein RecR
RECR (db=PatternScan db_id=PS01300 from=58 to=79 evalue=0.0 interpro_id=IPR015967 interpro_description=Zinc finger C4-type, RecR GO=Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310))
recR: recombination protein RecR (db=HMMTigr db_id=TIGR00615 from=2 to=197 evalue=3.3e-70 interpro_id=IPR000093 interpro_description=RecR protein GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310))
Recombination protein RecR (db=superfamily db_id=SSF111304 from=2 to=199 evalue=3.3e-67 interpro_id=IPR000093 interpro_description=RecR protein GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310))
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ACD41_10_7
uncultured bacterium, Bacteria
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Not on your lists |
comp(4510..4824)
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rplU; 50S ribosomal protein L21
seg (db=Seg db_id=seg from=44 to=56)
L21: ribosomal protein L21 (db=HMMTigr db_id=TIGR00061 from=2 to=104 evalue=1.3e-41 interpro_id=IPR001787 interpro_description=Ribosomal protein L21 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_L21p (db=HMMPfam db_id=PF00829 from=1 to=98 evalue=2.2e-34 interpro_id=IPR001787 interpro_description=Ribosomal protein L21 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD41_10_8
uncultured bacterium, Bacteria
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Not on your lists |
comp(4850..5251)
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ACD41_10_9
uncultured bacterium, Bacteria
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Not on your lists |
comp(5226..6026)
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Rfe; UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase
transmembrane_regions (db=TMHMM db_id=tmhmm from=19 to=41)
transmembrane_regions (db=TMHMM db_id=tmhmm from=61 to=80)
transmembrane_regions (db=TMHMM db_id=tmhmm from=93 to=115)
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ACD41_10_10
uncultured bacterium, Bacteria
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Not on your lists |
comp(6305..6706)
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putative Holliday junction resolvase (EC:3.1.-.-)
UPF0081 (db=HMMPfam db_id=PF03652 from=1 to=130 evalue=1.4e-35 interpro_id=IPR005227 interpro_description=Resolvase, holliday junction-type, YqgF-like GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310), Biological Process: response to DNA damage stimulus (GO:0006974), Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788))
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=1 to=132 evalue=8.5e-31 interpro_id=IPR012337 interpro_description=Polynucleotidyl transferase, ribonuclease H fold GO=Molecular Function: nucleic acid binding (GO:0003676))
no description (db=Gene3D db_id=G3DSA:3.30.420.140 from=2 to=129 evalue=7.4e-28 interpro_id=IPR005227 interpro_description=Resolvase, holliday junction-type, YqgF-like GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310), Biological Process: response to DNA damage stimulus (GO:0006974), Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788))
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ACD41_10_11
uncultured bacterium, Bacteria
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Not on your lists |
comp(6717..7466)
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Methionine aminopeptidase n=1 Tax=NC10 bacterium 'Dutch sediment' RepID=D5MKJ0_9BACT (db=UNIREF evalue=3.0e-70 bit_score=268.0 identity=53.85 coverage=98.0)
map; methionine aminopeptidase (EC:3.4.11.18)
met_pdase_I: methionine aminopeptidase, t (db=HMMTigr db_id=TIGR00500 from=2 to=249 evalue=1.3e-113 interpro_id=IPR002467 interpro_description=Peptidase M24A, methionine aminopeptidase, subfamily 1 GO=Molecular Function: aminopeptidase activity (GO:0004177), Biological Process: proteolysis (GO:0006508), Molecular Function: metalloexopeptidase activity (GO:0008235))
no description (db=Gene3D db_id=G3DSA:3.90.230.10 from=1 to=247 evalue=3.2e-81 interpro_id=IPR000994 interpro_description=Peptidase M24, structural domain GO=Biological Process: cellular process (GO:0009987))
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ACD41_10_12
uncultured bacterium, Bacteria
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Not on your lists |
comp(7463..8095)
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adenylate kinase (EC:2.7.4.3)
ADENYLATE_KINASE (db=PatternScan db_id=PS00113 from=83 to=94 evalue=0.0 interpro_id=IPR000850 interpro_description=Adenylate kinase GO=Molecular Function: ATP binding (GO:0005524), Biological Process: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process (GO:0006139), Molecular Function: nucleobase, nucleoside, nucleotide kinase activity (GO:0019205))
adk: adenylate kinases (db=HMMTigr db_id=TIGR01351 from=4 to=210 evalue=5.8e-87 interpro_id=IPR006259 interpro_description=Adenylate kinase, subfamily GO=Molecular Function: ATP binding (GO:0005524), Biological Process: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process (GO:0006139), Molecular Function: phosphotransferase activity, phosphate group as acceptor (GO:0016776), Molecular Function: nucleotide kinase activity (GO:0019201))
ADENYLATE KINASE (db=HMMPanther db_id=PTHR23359:SF22 from=4 to=210 evalue=4.2e-82)
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ACD41_10_13
uncultured bacterium, Bacteria
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Not on your lists |
comp(8100..9374)
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preprotein translocase subunit SecY
preprotein translocase subunit SecY
Preprotein translocase subunit secY n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TWG2_ALKMQ (db=UNIREF evalue=1.0e-81 bit_score=307.0 identity=44.76 coverage=98.8235294117647)
transmembrane_regions (db=TMHMM db_id=tmhmm from=208 to=225)
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ACD41_10_14
uncultured bacterium, Bacteria
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Not on your lists |
comp(9359..9769)
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50S ribosomal protein L15
seg (db=Seg db_id=seg from=111 to=122)
seg (db=Seg db_id=seg from=40 to=53)
RIBOSOMAL_L15 (db=PatternScan db_id=PS00475 from=97 to=127 evalue=0.0 interpro_id=IPR001196 interpro_description=Ribosomal protein L15, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD41_10_15
uncultured bacterium, Bacteria
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Not on your lists |
comp(9783..10268)
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rpsE; 30S ribosomal subunit protein S5
Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=A9NV88_PICSI (db=UNIREF evalue=4.0e-27 bit_score=123.0 identity=51.28 coverage=95.0617283950617)
seg (db=Seg db_id=seg from=45 to=61)
RIBOSOMAL_S5 (db=PatternScan db_id=PS00585 from=36 to=68 evalue=0.0 interpro_id=IPR018192 interpro_description=Ribosomal protein S5, N-terminal, conserved site)
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ACD41_10_16
uncultured bacterium, Bacteria
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Not on your lists |
comp(10280..10639)
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50S ribosomal protein L18
50S ribosomal protein L18 n=7 Tax=Lactobacillus jensenii RepID=C2E011_9LACO (db=UNIREF evalue=1.0e-24 bit_score=115.0 identity=61.11 coverage=87.5)
seg (db=Seg db_id=seg from=107 to=115)
L18_bact: ribosomal protein L18 (db=HMMTigr db_id=TIGR00060 from=8 to=119 evalue=1.0e-43 interpro_id=IPR004389 interpro_description=Ribosomal protein L18, bacterial GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD41_10_17
uncultured bacterium, Bacteria
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Not on your lists |
comp(10653..11195)
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50S ribosomal protein L6
Ribosomal protein L6 n=1 Tax=Clostridium lentocellum DSM 5427 RepID=D5QXT1_9FIRM (db=UNIREF evalue=7.0e-40 bit_score=166.0 identity=52.84 coverage=96.1325966850829)
seg (db=Seg db_id=seg from=33 to=45)
RIBOSOMAL_L6_1 (db=PatternScan db_id=PS00525 from=154 to=162 evalue=0.0 interpro_id=IPR002358 interpro_description=Ribosomal protein L6, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD41_10_18
uncultured bacterium, Bacteria
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Not on your lists |
comp(11201..11593)
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30S ribosomal protein S8
RIBOSOMAL_S8 (db=PatternScan db_id=PS00053 from=100 to=117 evalue=0.0 interpro_id=IPR000630 interpro_description=Ribosomal protein S8 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_S8 (db=HMMPfam db_id=PF00410 from=3 to=130 evalue=3.3e-44 interpro_id=IPR000630 interpro_description=Ribosomal protein S8 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal protein S8 (db=superfamily db_id=SSF56047 from=2 to=130 evalue=4.8e-43 interpro_id=IPR000630 interpro_description=Ribosomal protein S8 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD41_10_19
uncultured bacterium, Bacteria
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Not on your lists |
comp(11620..11805)
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30S ribosomal protein S14
RIBOSOMAL_S14 (db=PatternScan db_id=PS00527 from=23 to=45 evalue=0.0 interpro_id=IPR018271 interpro_description=Ribosomal protein S14, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
30S RIBOSOMAL PROTEIN S14 (db=HMMPanther db_id=PTHR19836 from=10 to=61 evalue=4.6e-26 interpro_id=IPR001209 interpro_description=Ribosomal protein S14 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
30S RIBOSOMAL PROTEIN S14 (db=HMMPanther db_id=PTHR19836:SF6 from=10 to=61 evalue=4.6e-26)
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ACD41_10_20
uncultured bacterium, Bacteria
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Not on your lists |
comp(11810..12352)
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50S ribosomal protein L5
RIBOSOMAL_L5 (db=PatternScan db_id=PS00358 from=58 to=74 evalue=0.0 interpro_id=IPR020929 interpro_description=Ribosomal protein L5, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
60S RIBOSOMAL PROTEIN L11-RELATED (db=HMMPanther db_id=PTHR11994 from=1 to=180 evalue=2.2e-74 interpro_id=IPR002132 interpro_description=Ribosomal protein L5 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
50S RIBOSOMAL PROTEIN L5 (db=HMMPanther db_id=PTHR11994:SF4 from=1 to=180 evalue=2.2e-74)
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ACD41_10_21
uncultured bacterium, Bacteria
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Not on your lists |
comp(12349..12660)
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rplX; 50S ribosomal protein L24
MITOCHONDRIAL RIBOSOMAL PROTEIN L24 (db=HMMPanther db_id=PTHR12903 from=3 to=103 evalue=1.9e-34 interpro_id=IPR003256 interpro_description=Ribosomal protein L24 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
rplX_bact: ribosomal protein L24 (db=HMMTigr db_id=TIGR01079 from=1 to=103 evalue=1.9e-34 interpro_id=IPR003256 interpro_description=Ribosomal protein L24 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Translation proteins SH3-like domain (db=superfamily db_id=SSF50104 from=3 to=102 evalue=2.8e-30 interpro_id=IPR008991 interpro_description=Translation protein SH3-like)
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ACD41_10_22
uncultured bacterium, Bacteria
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Not on your lists |
comp(12657..13028)
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50S ribosomal protein L14
rplN_bact: ribosomal protein L14 (db=HMMTigr db_id=TIGR01067 from=1 to=123 evalue=1.1e-73 interpro_id=IPR005745 interpro_description=Ribosomal protein L14, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934))
50S RIBOSOMAL PROTEIN L14 (db=HMMPanther db_id=PTHR11761:SF3 from=1 to=123 evalue=8.5e-63 interpro_id=IPR005745 interpro_description=Ribosomal protein L14, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934))
50S/60S RIBOSOMAL PROTEIN L14/L23 (db=HMMPanther db_id=PTHR11761 from=1 to=123 evalue=8.5e-63 interpro_id=IPR000218 interpro_description=Ribosomal protein L14b/L23e GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD41_10_23
uncultured bacterium, Bacteria
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Not on your lists |
comp(13025..13297)
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rpsQ; 30S ribosomal subunit protein S17
S17_bact: 30S ribosomal protein S17 (db=HMMTigr db_id=TIGR03635 from=14 to=85 evalue=1.2e-35 interpro_id=IPR019984 interpro_description=Ribosomal protein S17, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_S17 (db=HMMPfam db_id=PF00366 from=19 to=85 evalue=1.5e-24 interpro_id=IPR000266 interpro_description=Ribosomal protein S17 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
30S RIBOSOMAL PROTEIN S17 (db=HMMPanther db_id=PTHR10744:SF1 from=15 to=85 evalue=1.2e-23)
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ACD41_10_24
uncultured bacterium, Bacteria
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Not on your lists |
comp(13275..13469)
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coiled-coil (db=Coil db_id=coil from=11 to=32 evalue=NA)
Ribosomal_L29 (db=HMMPfam db_id=PF00831 from=3 to=58 evalue=3.7e-18 interpro_id=IPR001854 interpro_description=Ribosomal protein L29 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal protein L29 (L29p) (db=superfamily db_id=SSF46561 from=1 to=60 evalue=1.4e-14 interpro_id=IPR001854 interpro_description=Ribosomal protein L29 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
L29: ribosomal protein L29 (db=HMMTigr db_id=TIGR00012 from=5 to=60 evalue=3.9e-14 interpro_id=IPR001854 interpro_description=Ribosomal protein L29 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD41_10_25
uncultured bacterium, Bacteria
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Not on your lists |
comp(13466..13873)
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rplP; 50S ribosomal protein L16
seg (db=Seg db_id=seg from=78 to=88)
RIBOSOMAL_L16_2 (db=PatternScan db_id=PS00701 from=82 to=93 evalue=0.0 interpro_id=IPR020798 interpro_description=Ribosomal protein L16, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
rplP_bact: ribosomal protein L16 (db=HMMTigr db_id=TIGR01164 from=2 to=127 evalue=1.4e-71 interpro_id=IPR000114 interpro_description=Ribosomal protein L16 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
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ACD41_10_26
uncultured bacterium, Bacteria
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Not on your lists |
comp(13879..14631)
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rpsC; 30S ribosomal protein S3
RIBOSOMAL_S3 (db=PatternScan db_id=PS00548 from=167 to=201 evalue=0.0 interpro_id=IPR018280 interpro_description=Ribosomal protein S3, conserved site GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
rpsC_bact: ribosomal protein S3 (db=HMMTigr db_id=TIGR01009 from=1 to=215 evalue=1.7e-92 interpro_id=IPR005704 interpro_description=Ribosomal protein S3, bacterial GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
CHLOROPLAST 30S RIBOSOMAL PROTEIN S3 (db=HMMPanther db_id=PTHR11760:SF10 from=86 to=237 evalue=7.9e-56)
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ACD41_10_27
uncultured bacterium, Bacteria
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Not on your lists |
comp(14636..14980)
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50S ribosomal protein L22
RIBOSOMAL_L22 (db=PatternScan db_id=PS00464 from=83 to=107 evalue=0.0 interpro_id=IPR018260 interpro_description=Ribosomal protein L22/L17, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal protein L22 (db=superfamily db_id=SSF54843 from=1 to=110 evalue=1.9e-34 interpro_id=IPR001063 interpro_description=Ribosomal protein L22/L17 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_L22 (db=HMMPfam db_id=PF00237 from=5 to=108 evalue=3.8e-34 interpro_id=IPR001063 interpro_description=Ribosomal protein L22/L17 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD41_10_28
uncultured bacterium, Bacteria
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Not on your lists |
comp(14982..15323)
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rpsS; 30S ribosomal protein S19
seg (db=Seg db_id=seg from=88 to=107)
RIBOSOMAL_S19 (db=PatternScan db_id=PS00323 from=53 to=77 evalue=0.0 interpro_id=IPR020934 interpro_description=Ribosomal protein S19 conserved site GO=Molecular Function: RNA binding (GO:0003723))
rpsS_bact: ribosomal protein S19 (db=HMMTigr db_id=TIGR01050 from=1 to=92 evalue=1.3e-50 interpro_id=IPR005732 interpro_description=Ribosomal protein S19, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
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ACD41_10_29
uncultured bacterium, Bacteria
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Not on your lists |
comp(15328..16164)
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rplB; 50S ribosomal protein L2
rplB; 50S ribosomal protein L2
50S ribosomal protein L2 n=1 Tax=Ammonifex degensii KC4 RepID=C9R8I7_AMMDK (db=UNIREF evalue=8.0e-81 bit_score=303.0 identity=54.35 coverage=97.4910394265233)
rplB_bact: ribosomal protein L2 (db=HMMTigr db_id=TIGR01171 from=3 to=278 evalue=2.3e-143 interpro_id=IPR005880 interpro_description=Ribosomal protein L2, bacterial-type GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934), Molecular Function: transferase activity (GO:0016740))
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ACD41_10_30
uncultured bacterium, Bacteria
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Not on your lists |
comp(16168..16524)
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seg (db=Seg db_id=seg from=77 to=92)
Ribosomal proteins S24e, L23 and L15e (db=superfamily db_id=SSF54189 from=35 to=118 evalue=1.2e-16 interpro_id=IPR012678 interpro_description=Ribosomal protein L23/L15e, core GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
no description (db=Gene3D db_id=G3DSA:3.30.70.330 from=35 to=117 evalue=3.3e-16 interpro_id=IPR012677 interpro_description=Nucleotide-binding, alpha-beta plait GO=Molecular Function: nucleotide binding (GO:0000166))
Ribosomal_L23 (db=HMMPfam db_id=PF00276 from=35 to=117 evalue=1.2e-14 interpro_id=IPR013025 interpro_description=Ribosomal protein L25/L23 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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