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ACD41_42

Alias: ACD41_22925.7846.17

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD41_42_1

Not on your lists

comp(13..843)
DNA (831bp) protein (277aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
seg (db=Seg db_id=seg from=206 to=217)
transmembrane_regions (db=TMHMM db_id=tmhmm from=175 to=197)
seg (db=Seg db_id=seg from=260 to=272)
ACD41_42_2

Not on your lists

comp(1133..1861)
DNA (729bp) protein (243aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=25 to=47)
seg (db=Seg db_id=seg from=25 to=45)
Trypsin-like serine proteases (db=superfamily db_id=SSF50494 from=70 to=240 evalue=9.5e-13 interpro_id=IPR009003 interpro_description=Serine/cysteine peptidase, trypsin-like GO=Molecular Function: catalytic activity (GO:0003824))
Uncharacterized protein {ECO:0000313|EMBL:EKD79179.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD41_42_3

Not on your lists

comp(1866..2633)
DNA (768bp) protein (256aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=231 to=253)
seg (db=Seg db_id=seg from=11 to=22)
seg (db=Seg db_id=seg from=35 to=47)
seg (db=Seg db_id=seg from=60 to=90)
ACD41_42_4

Not on your lists

comp(2620..2988)
DNA (369bp) protein (123aa)
seg (db=Seg db_id=seg from=53 to=67)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=25)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=18 evalue=5.0)
Uncharacterized protein {ECO:0000313|EMBL:EKD79181.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD41_42_5

Not on your lists

comp(2985..3095)
DNA (111bp) protein (37aa)
seg (db=Seg db_id=seg from=18 to=28)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
Uncharacterized protein {ECO:0000313|EMBL:EKD79182.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD41_42_6

Not on your lists

comp(3100..3870)
DNA (771bp) protein (257aa)
SPFH protein
seg (db=Seg db_id=seg from=201 to=219)
seg (db=Seg db_id=seg from=7 to=27)
seg (db=Seg db_id=seg from=179 to=190)
ACD41_42_7

Not on your lists

comp(3873..4421)
DNA (549bp) protein (183aa)
putative transcriptional regulator
probable transcriptional regulator n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B25B3 (db=UNIREF evalue=2.0e-25 bit_score=118.0 identity=37.17 coverage=97.8142076502732)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=5 to=71 evalue=2.4e-06)
Putative transcriptional regulator {ECO:0000313|EMBL:EKD79184.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD41_42_8

Not on your lists

4459..6624
DNA (2166bp) protein (722aa)
seg (db=Seg db_id=seg from=338 to=349)
coiled-coil (db=Coil db_id=coil from=383 to=404 evalue=NA)
NHL repeat (db=superfamily db_id=SSF101898 from=551 to=721 evalue=4.8e-07)
PP2C-like (db=superfamily db_id=SSF81606 from=60 to=220 evalue=4.5e-06 interpro_id=IPR001932 interpro_description=Protein phosphatase 2C-related GO=Molecular Function: catalytic activity (GO:0003824))
ACD41_42_9

Not on your lists


comp(6682..7092)
DNA (411bp) protein (137aa)
50S ribosomal protein L7/L12
50S ribosomal protein L7/L12 n=3 Tax=Clostridiales RepID=D5HE43_9FIRM (db=UNIREF evalue=1.0e-18 bit_score=95.1 identity=68.64 coverage=84.6715328467153)
seg (db=Seg db_id=seg from=111 to=128)
seg (db=Seg db_id=seg from=43 to=64)
ACD41_42_10

Not on your lists


comp(7115..7633)
DNA (519bp) protein (173aa)
50S ribosomal protein L10
Ribosomal_L10 (db=HMMPfam db_id=PF00466 from=4 to=98 evalue=9.7e-14 interpro_id=IPR001790 interpro_description=Ribosomal protein L10 GO=Cellular Component: intracellular (GO:0005622), Biological Process: ribosome biogenesis (GO:0042254))
Q30KS2_CANFA_Q30KS2; (db=BlastProDom db_id=PD968187 from=24 to=152 evalue=0.004)
Ribosomal_L10 (db=HAMAP db_id=MF_00362 from=3 to=159 evalue=18.649)
Displaying 10 items

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