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ACD41_55

Alias: ACD41_9540.18730.22

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD41_55_1

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1..96
DNA (96bp) protein (32aa)
1..96 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD78231.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD41_55_2

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188..1060
DNA (873bp) protein (291aa)
homocysteine S-methyltransferase
seg (db=Seg db_id=seg from=157 to=166)
Homocysteine S-methyltransferase (db=superfamily db_id=SSF82282 from=6 to=290 evalue=3.5e-75 interpro_id=IPR003726 interpro_description=Homocysteine S-methyltransferase GO=Molecular Function: homocysteine S-methyltransferase activity (GO:0008898))
no description (db=Gene3D db_id=G3DSA:3.20.20.330 from=5 to=289 evalue=2.1e-62 interpro_id=IPR003726 interpro_description=Homocysteine S-methyltransferase GO=Molecular Function: homocysteine S-methyltransferase activity (GO:0008898))
ACD41_55_3

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1057..1713
DNA (657bp) protein (219aa)
tRNA ligase
PheT/TilS domain (db=superfamily db_id=SSF56037 from=42 to=215 evalue=1.2e-22 interpro_id=IPR020825 interpro_description=Phenylalanyl-tRNA synthetase, B3/B4)
B3_4 (db=HMMPfam db_id=PF03483 from=67 to=189 evalue=4.0e-20 interpro_id=IPR005146 interpro_description=B3/B4 tRNA-binding domain GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: phenylalanine-tRNA ligase activity (GO:0004826), Biological Process: translation (GO:0006412))
no description (db=HMMSmart db_id=SM00873 from=59 to=212 evalue=7.6e-07 interpro_id=IPR005146 interpro_description=B3/B4 tRNA-binding domain GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: phenylalanine-tRNA ligase activity (GO:0004826), Biological Process: translation (GO:0006412))
ACD41_55_4

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comp(2103..6347)
DNA (4245bp) protein (1415aa)
seg (db=Seg db_id=seg from=13 to=22)
seg (db=Seg db_id=seg from=199 to=212)
seg (db=Seg db_id=seg from=289 to=302)
seg (db=Seg db_id=seg from=717 to=729)
ACD41_55_5

Not on your lists

6727..7929
DNA (1203bp) protein (401aa)
seg (db=Seg db_id=seg from=38 to=55)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
Uncharacterized protein {ECO:0000313|EMBL:EKD78235.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD41_55_6

Not on your lists

comp(7918..9189)
DNA (1272bp) protein (424aa)
seg (db=Seg db_id=seg from=57 to=71)
FN3 (db=ProfileScan db_id=PS50853 from=21 to=105 evalue=9.614 interpro_id=IPR003961 interpro_description=Fibronectin, type III)
Uncharacterized protein {ECO:0000313|EMBL:EKD78236.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
ACD41_55_7

Not on your lists

comp(9161..10384)
DNA (1224bp) protein (408aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
seg (db=Seg db_id=seg from=30 to=42)
seg (db=Seg db_id=seg from=290 to=321)
Uncharacterized protein {ECO:0000313|EMBL:EKD78237.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD41_55_8

Not on your lists

comp(10374..12458)
DNA (2085bp) protein (695aa)
FG-GAP repeat-containing protein
seg (db=Seg db_id=seg from=419 to=430)
seg (db=Seg db_id=seg from=233 to=251)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
ACD41_55_9

Not on your lists

12497..12754
DNA (258bp) protein (86aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=52 to=74)
transmembrane_regions (db=TMHMM db_id=tmhmm from=26 to=48)
Uncharacterized protein {ECO:0000313|EMBL:EKD78239.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
ACD41_55_10

Not on your lists

12758..13288
DNA (531bp) protein (177aa)
12758..13288 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD78240.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD41_55_11

Not on your lists

13291..14682
DNA (1392bp) protein (464aa)
FG-GAP repeat protein n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C3FF0 (db=UNIREF evalue=2.0e-32 bit_score=144.0 identity=40.61 coverage=53.8793103448276)
YD repeat-containing protein
seg (db=Seg db_id=seg from=97 to=113)
Duplicated hybrid motif (db=superfamily db_id=SSF51261 from=10 to=165 evalue=1.1e-21 interpro_id=IPR011055 interpro_description=Duplicated hybrid motif)
ACD41_55_12

Not on your lists

14684..16267
DNA (1584bp) protein (528aa)
Glucocorticoid receptor-like (DNA-binding domain) (db=superfamily db_id=SSF57716 from=495 to=525 evalue=4.0e-05)
Uncharacterized protein {ECO:0000313|EMBL:EKD78242.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD41_55_13

Not on your lists

comp(16264..16785)
DNA (522bp) protein (174aa)
seg (db=Seg db_id=seg from=151 to=172)
seg (db=Seg db_id=seg from=74 to=87)
seg (db=Seg db_id=seg from=12 to=39)
Uncharacterized protein {ECO:0000313|EMBL:EKD78243.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD41_55_14

Not on your lists

16836..17528
DNA (693bp) protein (231aa)
Uracil-DNA glycosylase n=1 Tax=Bacteroides plebeius DSM 17135 RepID=B5CYG1_9BACE (db=UNIREF evalue=5.0e-88 bit_score=327.0 identity=69.09 coverage=94.8051948051948)
uracil-DNA glycosylase
uracil-DNA glycosylase
U_DNA_GLYCOSYLASE (db=PatternScan db_id=PS00130 from=61 to=70 evalue=0.0 interpro_id=IPR018085 interpro_description=Uracil-DNA glycosylase, active site GO=Biological Process: DNA repair (GO:0006281), Molecular Function: hydrolase activity, hydrolyzing N-glycosyl compounds (GO:0016799))
ACD41_55_15

Not on your lists

comp(17509..18228)
DNA (720bp) protein (240aa)
seg (db=Seg db_id=seg from=141 to=155)
transmembrane_regions (db=TMHMM db_id=tmhmm from=203 to=222)
transmembrane_regions (db=TMHMM db_id=tmhmm from=166 to=188)
transmembrane_regions (db=TMHMM db_id=tmhmm from=132 to=154)
ACD41_55_16

Not on your lists

comp(18374..18604)
DNA (231bp) protein (77aa)
18374..18604 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD78229.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD41_55_17

Not on your lists

comp(18606..18770)
DNA (165bp) protein (55aa)
inositol-phosphate phosphatase (EC:3.1.3.25)
IMP_2 (db=PatternScan db_id=PS00630 from=7 to=21 evalue=0.0 interpro_id=IPR020550 interpro_description=Inositol monophosphatase, conserved site GO=Molecular Function: inositol or phosphatidylinositol phosphatase activity (GO:0004437))
INOSITOL MONOPHOSPHATASE (db=HMMPanther db_id=PTHR20854 from=2 to=53 evalue=1.4e-14 interpro_id=IPR000760 interpro_description=Inositol monophosphatase GO=Molecular Function: inositol or phosphatidylinositol phosphatase activity (GO:0004437))
MYO INOSITOL MONOPHOSPHATASE (db=HMMPanther db_id=PTHR20854:SF4 from=2 to=53 evalue=1.4e-14)
Displaying 17 items

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