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ACD41_56

Alias: ACD41_50899.10541.16

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD41_56_1

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comp(1..108)
DNA (108bp) protein (36aa)
SHORT-CHAIN DEHYDROGENASES/REDUCTASE FAMILY MEMBER (db=HMMPanther db_id=PTHR19410 from=1 to=35 evalue=3.3e-12 interpro_id=IPR002198 interpro_description=Short-chain dehydrogenase/reductase SDR GO=Biological Process: metabolic process (GO:0008152), Molecular Function: oxidoreductase activity (GO:0016491))
3-OXOACYL-[ACYL-CARRIER PROTEIN] REDUCTASE-RELATED (db=HMMPanther db_id=PTHR19410:SF95 from=1 to=35 evalue=3.3e-12)
NAD(P)-binding Rossmann-fold domains (db=superfamily db_id=SSF51735 from=1 to=35 evalue=3.2e-09)
no description (db=Gene3D db_id=G3DSA:3.40.50.720 from=2 to=35 evalue=1.2e-06 interpro_id=IPR016040 interpro_description=NAD(P)-binding domain GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: binding (GO:0005488), Biological Process: metabolic process (GO:0008152))
ACD41_56_2

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144..1064
DNA (921bp) protein (307aa)
Conserved protein of unknown function; putative transporter
transmembrane_regions (db=TMHMM db_id=tmhmm from=280 to=302)
seg (db=Seg db_id=seg from=2 to=20)
seg (db=Seg db_id=seg from=59 to=79)
ACD41_56_3

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comp(1061..1330)
DNA (270bp) protein (90aa)
addiction module antitoxin (db=KEGG evalue=2.0e-12 bit_score=74.7 identity=41.38 coverage=88.8888888888889)
RelE-like (db=superfamily db_id=SSF143011 from=1 to=86 evalue=3.1e-15)
Plasmid_stabil (db=HMMPfam db_id=PF05016 from=4 to=87 evalue=5.7e-10 interpro_id=IPR007712 interpro_description=Plasmid stabilisation system)
addiction module antitoxin alias=ACD41_50899.10541.16G0003,ACD41_50899.10541.16_3,ACD41_C00056G00003 id=53223 tax=ACD41 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria organism_group=OD1, not OD1-i organism_desc=OD1
ACD41_56_4

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comp(1340..1591)
DNA (252bp) protein (84aa)
PhdYeFM (db=HMMPfam db_id=PF02604 from=6 to=67 evalue=6.3e-07 interpro_id=IPR006442 interpro_description=Prevent-host-death protein)
YefM-like (db=superfamily db_id=SSF143120 from=3 to=77 evalue=7.2e-07)
Uncharacterized protein {ECO:0000313|EMBL:EKD78679.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD41_56_5

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comp(1615..2916)
DNA (1302bp) protein (434aa)
L-threonine synthase n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11YZ7_CYTH3 (db=UNIREF evalue=2.0e-129 bit_score=466.0 identity=50.93 coverage=99.3087557603687)
threonine synthase
threonine synthase
seg (db=Seg db_id=seg from=226 to=237)
ACD41_56_6

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comp(2894..3499)
DNA (606bp) protein (202aa)
hypothetical protein
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=133 evalue=1.6e-10)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=2 to=189 evalue=4.5e-05)
Uncharacterized protein {ECO:0000313|EMBL:EKD78681.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD41_56_7

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comp(3496..4569)
DNA (1074bp) protein (358aa)
aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) (EC:1.2.1.11)
aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase (Non-peptidoglycan organisms) n=3 Tax=Clostridiales RepID=D4MZQ5_9FIRM (db=UNIREF evalue=6.0e-114 bit_score=414.0 identity=57.3 coverage=98.8826815642458)
seg (db=Seg db_id=seg from=339 to=353)
ACD41_56_8

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comp(4566..7040)
DNA (2475bp) protein (825aa)
aspartate kinase (EC:2.7.2.4 1.1.1.3)
aspartate kinase (EC:2.7.2.4 1.1.1.3)
Bifunctional protein: aspartokinase I; homoserine dehydrogenase n=1 Tax=Cytophaga hutchinsonii ATCC 33406 RepID=Q11YZ9_CYTH3 (db=UNIREF evalue=0.0 bit_score=746.0 identity=50.8 coverage=98.1818181818182)
seg (db=Seg db_id=seg from=197 to=211)
ACD41_56_9

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comp(7241..8329)
DNA (1089bp) protein (363aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
seg (db=Seg db_id=seg from=342 to=362)
seg (db=Seg db_id=seg from=321 to=339)
seg (db=Seg db_id=seg from=305 to=318)
ACD41_56_10

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comp(8342..8605)
DNA (264bp) protein (88aa)
seg (db=Seg db_id=seg from=76 to=87)
seg (db=Seg db_id=seg from=2 to=17)
transmembrane_regions (db=TMHMM db_id=tmhmm from=63 to=85)
transmembrane_regions (db=TMHMM db_id=tmhmm from=34 to=56)
ACD41_56_11

Not on your lists

comp(8610..9047)
DNA (438bp) protein (146aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
transmembrane_regions (db=TMHMM db_id=tmhmm from=42 to=64)
transmembrane_regions (db=TMHMM db_id=tmhmm from=118 to=140)
ACD41_56_12

Not on your lists

comp(9044..9538)
DNA (495bp) protein (165aa)
seg (db=Seg db_id=seg from=137 to=149)
transmembrane_regions (db=TMHMM db_id=tmhmm from=133 to=155)
transmembrane_regions (db=TMHMM db_id=tmhmm from=106 to=128)
transmembrane_regions (db=TMHMM db_id=tmhmm from=84 to=101)
ACD41_56_13

Not on your lists

9632..10132
DNA (501bp) protein (167aa)
doxx family protein
seg (db=Seg db_id=seg from=105 to=117)
seg (db=Seg db_id=seg from=83 to=97)
transmembrane_regions (db=TMHMM db_id=tmhmm from=129 to=148)
ACD41_56_14

Not on your lists

comp(10172..10441)
DNA (270bp) protein (90aa)
excinuclease ABC subunit C
GIY-YIG (db=HMMPfam db_id=PF01541 from=1 to=69 evalue=8.2e-11 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281))
GIY-YIG endonuclease (db=superfamily db_id=SSF82771 from=1 to=72 evalue=3.3e-06 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281))
gb def: Hypothetical 35.9 kDa protein in MCX1-PBP2 intergenic region (db=HMMPanther db_id=PTHR20208:SF1 from=1 to=63 evalue=0.00052)
ACD41_56_15

Not on your lists

10459..10578
DNA (120bp) protein (40aa)
seg (db=Seg db_id=seg from=6 to=15)
Uncharacterized protein {ECO:0000313|EMBL:EKD78690.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 15 items

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