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ACD41_103

Alias: ACD41_13360.11939.18

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD41_103_1

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comp(1..459)
DNA (459bp) protein (153aa)
hypothetical protein
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Thioalkalivibrio sp. K90mix RepID=D3SA66_THISK (db=UNIREF evalue=3.0e-51 bit_score=203.0 identity=62.75 coverage=98.6928104575163)
Predicted S-adenosyl-L-methionine dependent 3-demethylubiquinone-9 3-methyltransferase (db=HMMPIR db_id=PIRSF021700 from=1 to=153 evalue=1.5e-71 interpro_id=IPR009725 interpro_description=3-demethylubiquinone-9 3-O-methyltransferase)
Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (db=superfamily db_id=SSF54593 from=1 to=152 evalue=2.7e-47)
ACD41_103_2

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comp(475..891)
DNA (417bp) protein (139aa)
hypothetical protein
DUF1428 (db=HMMPfam db_id=PF07237 from=16 to=125 evalue=8.4e-30 interpro_id=IPR009874 interpro_description=Protein of unknown function DUF1428)
Uncharacterized protein {ECO:0000313|EMBL:EKD79556.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
protein of unknown function DUF1428 alias=ACD41_C00103G00002,ACD41_13360.11939.18G0002,ACD41_13360.11939.18_2 id=53585 tax=ACD41 species=Methanosphaerula palustris genus=Methanosphaerula taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota organism_group=OD1, not OD1-i organism_desc=OD1
ACD41_103_3

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comp(950..1252)
DNA (303bp) protein (101aa)
hypothetical protein
hypothetical protein alias=ACD41_C00103G00003,ACD41_13360.11939.18G0003,ACD41_13360.11939.18_3 id=53584 tax=ACD41 species=Rhodococcus jostii genus=Rhodococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria organism_group=OD1, not OD1-i organism_desc=OD1
Uncharacterized protein {ECO:0000313|EMBL:EKD79557.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD41_103_4

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comp(1438..2040)
DNA (603bp) protein (201aa)
seg (db=Seg db_id=seg from=133 to=144)
seg (db=Seg db_id=seg from=61 to=75)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=28)
transmembrane_regions (db=TMHMM db_id=tmhmm from=170 to=192)
ACD41_103_5

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comp(2037..2840)
DNA (804bp) protein (268aa)
2037..2840 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD79550.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD41_103_6

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comp(2837..4321)
DNA (1485bp) protein (495aa)
integral membrane protein MviN
transmembrane_regions (db=TMHMM db_id=tmhmm from=432 to=454)
transmembrane_regions (db=TMHMM db_id=tmhmm from=458 to=480)
transmembrane_regions (db=TMHMM db_id=tmhmm from=221 to=243)
ACD41_103_7

Not on your lists

comp(4287..4703)
DNA (417bp) protein (139aa)
4287..4703 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD79552.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD41_103_8

Not on your lists

4777..7350
DNA (2574bp) protein (858aa)
seg (db=Seg db_id=seg from=294 to=310)
seg (db=Seg db_id=seg from=528 to=551)
seg (db=Seg db_id=seg from=700 to=720)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
ACD41_103_9

Not on your lists

7373..9127
DNA (1755bp) protein (585aa)
dnaG; DNA primase
dnaG; DNA primase
DNA primase n=5 Tax=Dehalococcoides RepID=Q3Z903_DEHE1 (db=UNIREF evalue=2.0e-93 bit_score=346.0 identity=38.05 coverage=93.3333333333333)
seg (db=Seg db_id=seg from=339 to=351)
ACD41_103_10

Not on your lists

9340..10383
DNA (1044bp) protein (348aa)
RpoD subfamily RNA polymerase sigma-70 subunit
RpoD subfamily RNA polymerase sigma-70 subunit
RNA polymerase sigma factor n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=Q2RKT5_MOOTA (db=UNIREF evalue=2.0e-99 bit_score=365.0 identity=64.14 coverage=81.8965517241379)
SIGMA70_2 (db=PatternScan db_id=PS00716 from=309 to=335 evalue=0.0 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
ACD41_103_11

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10383..11894
DNA (1512bp) protein (504aa)
alternative thymidylate synthase-like
alternative thymidylate synthase-like
Alternative thymidylate synthase-like n=1 Tax=Candidatus Koribacter versatilis Ellin345 RepID=Q1II10_ACIBL (db=UNIREF evalue=1.0e-94 bit_score=350.0 identity=40.37 coverage=94.8412698412698)
Thy1 (db=HMMPfam db_id=PF02511 from=60 to=218 evalue=1.3e-10 interpro_id=IPR003669 interpro_description=Thymidylate synthase ThyX GO=Biological Process: dTMP biosynthetic process (GO:0006231), Molecular Function: FAD binding (GO:0050660), Molecular Function: thymidylate synthase (FAD) activity (GO:0050797))
Displaying 11 items

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